Protein–RNA interactions for Protein: A6NGJ6

TRIM64, Tripartite motif-containing protein 64, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM64A6NGJ6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TRIM64A6NGJ6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.39■■□□□ 1.34
TRIM64A6NGJ6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM64A6NGJ6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM64A6NGJ6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM64A6NGJ6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
TRIM64A6NGJ6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM64A6NGJ6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TRIM64A6NGJ6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM64A6NGJ6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM64A6NGJ6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM64A6NGJ6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM64A6NGJ6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 HLA-V-202ENST00000446817 847 ntBASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM64A6NGJ6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM64A6NGJ6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM64A6NGJ6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM64A6NGJ6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM64A6NGJ6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TRIM64A6NGJ6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRIM64A6NGJ6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM64A6NGJ6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM64A6NGJ6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM64A6NGJ6 MIR762-201ENST00000390236 83 ntBASIC23.33■■□□□ 1.33
TRIM64A6NGJ6 AC044849.2-201ENST00000606596 710 ntBASIC23.33■■□□□ 1.33
TRIM64A6NGJ6 AC010864.1-201ENST00000609407 1511 ntBASIC23.33■■□□□ 1.32
TRIM64A6NGJ6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM64A6NGJ6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM64A6NGJ6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM64A6NGJ6 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM64A6NGJ6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.32■■□□□ 1.32
TRIM64A6NGJ6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM64A6NGJ6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM64A6NGJ6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM64A6NGJ6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM64A6NGJ6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM64A6NGJ6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM64A6NGJ6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TRIM64A6NGJ6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 AC005559.1-201ENST00000589661 871 ntBASIC23.29■■□□□ 1.32
TRIM64A6NGJ6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM64A6NGJ6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM64A6NGJ6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM64A6NGJ6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM64A6NGJ6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM64A6NGJ6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIM64A6NGJ6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM64A6NGJ6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM64A6NGJ6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM64A6NGJ6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM64A6NGJ6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM64A6NGJ6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM64A6NGJ6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM64A6NGJ6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM64A6NGJ6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM64A6NGJ6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM64A6NGJ6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM64A6NGJ6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM64A6NGJ6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM64A6NGJ6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM64A6NGJ6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM64A6NGJ6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM64A6NGJ6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM64A6NGJ6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM64A6NGJ6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM64A6NGJ6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM64A6NGJ6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM64A6NGJ6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
TRIM64A6NGJ6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM64A6NGJ6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms