Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLRN2A0PK11 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLRN2A0PK11 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLRN2A0PK11 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CLRN2A0PK11 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.29■■■□□ 2.44
CLRN2A0PK11 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CLRN2A0PK11 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.29■■■□□ 2.44
CLRN2A0PK11 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CLRN2A0PK11 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CLRN2A0PK11 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CLRN2A0PK11 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CLRN2A0PK11 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.27■■■□□ 2.44
CLRN2A0PK11 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CLRN2A0PK11 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.27■■■□□ 2.44
CLRN2A0PK11 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.27■■■□□ 2.44
CLRN2A0PK11 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CLRN2A0PK11 ST7-AS1-201ENST00000456775 1889 ntBASIC30.26■■■□□ 2.43
CLRN2A0PK11 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.25■■■□□ 2.43
CLRN2A0PK11 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CLRN2A0PK11 RARRES2P1-201ENST00000474487 481 ntBASIC30.25■■■□□ 2.43
CLRN2A0PK11 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.25■■■□□ 2.43
CLRN2A0PK11 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.25■■■□□ 2.43
CLRN2A0PK11 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.25■■■□□ 2.43
CLRN2A0PK11 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CLRN2A0PK11 AC100797.4-201ENST00000631653 1827 ntBASIC30.24■■■□□ 2.43
CLRN2A0PK11 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CLRN2A0PK11 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.23■■■□□ 2.43
CLRN2A0PK11 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLRN2A0PK11 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.23■■■□□ 2.43
CLRN2A0PK11 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLRN2A0PK11 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CLRN2A0PK11 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CLRN2A0PK11 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.21■■■□□ 2.43
CLRN2A0PK11 AC007029.1-201ENST00000604183 313 ntBASIC30.21■■■□□ 2.43
CLRN2A0PK11 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CLRN2A0PK11 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CLRN2A0PK11 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CLRN2A0PK11 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.19■■■□□ 2.42
CLRN2A0PK11 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CLRN2A0PK11 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLRN2A0PK11 AC129492.7-201ENST00000622992 756 ntBASIC30.18■■■□□ 2.42
CLRN2A0PK11 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CLRN2A0PK11 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
CLRN2A0PK11 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLRN2A0PK11 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CLRN2A0PK11 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CLRN2A0PK11 AL592293.1-201ENST00000502889 1188 ntBASIC30.17■■■□□ 2.42
CLRN2A0PK11 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.17■■■□□ 2.42
CLRN2A0PK11 DUX4L18-201ENST00000553347 1267 ntBASIC30.17■■■□□ 2.42
CLRN2A0PK11 AC009831.1-201ENST00000580420 1582 ntBASIC30.16■■■□□ 2.42
CLRN2A0PK11 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.15■■■□□ 2.42
CLRN2A0PK11 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CLRN2A0PK11 AP004833.2-201ENST00000532228 1454 ntBASIC30.15■■■□□ 2.42
CLRN2A0PK11 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.15■■■□□ 2.42
CLRN2A0PK11 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CLRN2A0PK11 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLRN2A0PK11 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CLRN2A0PK11 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CLRN2A0PK11 AC133552.2-201ENST00000619106 1032 ntBASIC30.14■■■□□ 2.42
CLRN2A0PK11 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLRN2A0PK11 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
CLRN2A0PK11 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CLRN2A0PK11 AL359258.2-201ENST00000564063 1566 ntBASIC30.12■■■□□ 2.41
CLRN2A0PK11 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.12■■■□□ 2.41
CLRN2A0PK11 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.12■■■□□ 2.41
CLRN2A0PK11 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CLRN2A0PK11 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.12■■■□□ 2.41
CLRN2A0PK11 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CLRN2A0PK11 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CLRN2A0PK11 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.12■■■□□ 2.41
CLRN2A0PK11 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.11■■■□□ 2.41
CLRN2A0PK11 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CLRN2A0PK11 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CLRN2A0PK11 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.11■■■□□ 2.41
CLRN2A0PK11 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CLRN2A0PK11 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CLRN2A0PK11 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.1■■■□□ 2.41
CLRN2A0PK11 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CLRN2A0PK11 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.09■■■□□ 2.41
CLRN2A0PK11 SMPD5-203ENST00000639008 1464 ntBASIC30.09■■■□□ 2.41
CLRN2A0PK11 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CLRN2A0PK11 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CLRN2A0PK11 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CLRN2A0PK11 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.08■■■□□ 2.41
CLRN2A0PK11 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CLRN2A0PK11 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
CLRN2A0PK11 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.07■■■□□ 2.4
CLRN2A0PK11 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.07■■■□□ 2.4
CLRN2A0PK11 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.07■■■□□ 2.4
CLRN2A0PK11 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.06■■■□□ 2.4
CLRN2A0PK11 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CLRN2A0PK11 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CLRN2A0PK11 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.06■■■□□ 2.4
CLRN2A0PK11 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CLRN2A0PK11 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CLRN2A0PK11 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.06■■■□□ 2.4
CLRN2A0PK11 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.06■■■□□ 2.4
CLRN2A0PK11 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CLRN2A0PK11 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLRN2A0PK11 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms