Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
TRAV20A0A0B4J274 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 AC110285.7-201ENST00000624417 1536 ntBASIC21.12■□□□□ 0.97
TRAV20A0A0B4J274 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 ABHD17AP5-201ENST00000580133 923 ntBASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV20A0A0B4J274 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRAV20A0A0B4J274 AC022413.1-201ENST00000624602 984 ntBASIC21.1■□□□□ 0.97
TRAV20A0A0B4J274 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
TRAV20A0A0B4J274 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV20A0A0B4J274 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV20A0A0B4J274 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV20A0A0B4J274 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAV20A0A0B4J274 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAV20A0A0B4J274 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV20A0A0B4J274 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV20A0A0B4J274 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAV20A0A0B4J274 AC148477.6-201ENST00000623746 465 ntBASIC21.06■□□□□ 0.96
TRAV20A0A0B4J274 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV20A0A0B4J274 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV20A0A0B4J274 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV20A0A0B4J274 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV20A0A0B4J274 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV20A0A0B4J274 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAV20A0A0B4J274 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV20A0A0B4J274 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV20A0A0B4J274 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV20A0A0B4J274 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV20A0A0B4J274 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAV20A0A0B4J274 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAV20A0A0B4J274 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAV20A0A0B4J274 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRAV20A0A0B4J274 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV20A0A0B4J274 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV20A0A0B4J274 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms