RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeastyeast

Gene UBA3, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA3YPR066W DRS1P32892 752 aaKnown RBP14.55□□□□□ -0.08
UBA3YPR066W MTC1P47018 478 aaKnown RBP14.37□□□□□ -0.11
UBA3YPR066W BFR2Q06631 534 aaKnown RBP12.8□□□□□ -0.36
UBA3YPR066W TFA1P36100 482 aa12.44□□□□□ -0.42
UBA3YPR066W AVT3P36062 692 aa12.24□□□□□ -0.45
UBA3YPR066W DIP2Q12220 943 aaPredicted RBP12.22□□□□□ -0.45
UBA3YPR066W FAP1P53971 965 aa12.21□□□□□ -0.45
UBA3YPR066W ISW2Q08773 1120 aa11.78□□□□□ -0.52
UBA3YPR066W PRI1P10363 409 aa11.71□□□□□ -0.53
UBA3YPR066W RPG1P38249 964 aaKnown RBP11.64□□□□□ -0.55
UBA3YPR066W AAD16Q02895 342 aa11.56□□□□□ -0.56
UBA3YPR066W RSE1Q04693 1361 aaKnown RBP11.54□□□□□ -0.56
UBA3YPR066W PRY3P47033 881 aa11.43□□□□□ -0.58
UBA3YPR066W RPL17AP05740 184 aaKnown RBP11.15□□□□□ -0.62
UBA3YPR066W RPL17BP46990 184 aaKnown RBP11.15□□□□□ -0.62
UBA3YPR066W TSR3Q12094 313 aaKnown RBP11.15□□□□□ -0.62
UBA3YPR066W REB1P21538 810 aa11.05□□□□□ -0.64
UBA3YPR066W RQC2Q12532 1038 aaKnown RBP10.96□□□□□ -0.65
UBA3YPR066W YCK3P39962 524 aa10.73□□□□□ -0.69
UBA3YPR066W HAA1Q12753 694 aaKnown RBP10.71□□□□□ -0.69
UBA3YPR066W MRPL32P25348 183 aa10.7□□□□□ -0.7
UBA3YPR066W SPT21P35209 758 aa10.66□□□□□ -0.7
UBA3YPR066W RIM101P33400 625 aa10.57□□□□□ -0.72
UBA3YPR066W PTP3P40048 928 aa10.5□□□□□ -0.73
UBA3YPR066W DMA1P38823 416 aa10.44□□□□□ -0.74
UBA3YPR066W YKR023WP36119 530 aaKnown RBP10.4□□□□□ -0.74
UBA3YPR066W SSP1P38871 571 aa10.3□□□□□ -0.76
UBA3YPR066W OXP1P28273 1286 aa10.29□□□□□ -0.76
UBA3YPR066W CDC27P38042 758 aa10.27□□□□□ -0.77
UBA3YPR066W HOP09932 586 aa10.23□□□□□ -0.77
UBA3YPR066W TFC8Q12308 588 aa10.2□□□□□ -0.78
UBA3YPR066W DCD1P06773 312 aa10.17□□□□□ -0.78
UBA3YPR066W YAH1Q12184 172 aaKnown RBP10.15□□□□□ -0.78
UBA3YPR066W YIL055CP40523 627 aaKnown RBP10.07□□□□□ -0.8
UBA3YPR066W YLR271WQ06152 274 aa10.07□□□□□ -0.8
UBA3YPR066W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
UBA3YPR066W YGL015CP33199 130 aa10.04□□□□□ -0.8
UBA3YPR066W RSM7P47150 247 aa9.93□□□□□ -0.82
UBA3YPR066W BCH2P36122 765 aa9.89□□□□□ -0.83
UBA3YPR066W MAP2P38174 421 aaKnown RBP9.88□□□□□ -0.83
UBA3YPR066W MGA2P40578 1113 aa9.87□□□□□ -0.83
UBA3YPR066W UBP10P53874 792 aaPredicted RBP9.87□□□□□ -0.83
UBA3YPR066W MON2P48563 1636 aaPredicted RBP9.84□□□□□ -0.83
UBA3YPR066W SCY1P53009 804 aa9.82□□□□□ -0.84
UBA3YPR066W CST9Q06032 482 aa9.79□□□□□ -0.84
UBA3YPR066W PSD2P53037 1138 aaKnown RBP9.74□□□□□ -0.85
UBA3YPR066W INO80P53115 1489 aa9.73□□□□□ -0.85
UBA3YPR066W LEO1P38439 464 aa9.73□□□□□ -0.85
UBA3YPR066W TAF7Q05021 590 aa9.73□□□□□ -0.85
UBA3YPR066W SAS10Q12136 610 aaPredicted RBP9.73□□□□□ -0.85
UBA3YPR066W AI2P03876 854 aa9.72□□□□□ -0.85
UBA3YPR066W EPS1P40557 701 aa9.71□□□□□ -0.86
UBA3YPR066W BBC1P47068 1157 aa9.68□□□□□ -0.86
UBA3YPR066W SLX5P32828 619 aaKnown RBP9.65□□□□□ -0.86
UBA3YPR066W BDF1P35817 686 aa9.64□□□□□ -0.87
UBA3YPR066W LEU3P08638 886 aa9.55□□□□□ -0.88
UBA3YPR066W RAM2P29703 316 aa9.51□□□□□ -0.89
UBA3YPR066W TIF4632P39936 914 aaKnown RBP9.5□□□□□ -0.89
UBA3YPR066W MRM1P25270 412 aa9.46□□□□□ -0.9
UBA3YPR066W SWR1Q05471 1514 aa9.43□□□□□ -0.9
UBA3YPR066W RCR1P38212 213 aa9.43□□□□□ -0.9
UBA3YPR066W TY1B-DR4Q07793 1604 aa9.42□□□□□ -0.9
UBA3YPR066W TGL3P40308 642 aa9.4□□□□□ -0.9
UBA3YPR066W SET1P38827 1080 aaKnown RBP9.39□□□□□ -0.91
UBA3YPR066W SGS1P35187 1447 aa9.38□□□□□ -0.91
UBA3YPR066W DNA2P38859 1522 aa9.37□□□□□ -0.91
UBA3YPR066W TCB3Q03640 1545 aaKnown RBP9.36□□□□□ -0.91
UBA3YPR066W RTG3P38165 486 aa9.34□□□□□ -0.91
UBA3YPR066W YPR148CQ06523 435 aa9.32□□□□□ -0.92
UBA3YPR066W VPS70P47161 811 aa9.3□□□□□ -0.92
UBA3YPR066W MAK11P20484 414 aaKnown RBP9.27□□□□□ -0.93
UBA3YPR066W RPN1P38764 993 aaKnown RBP9.26□□□□□ -0.93
UBA3YPR066W CKB1P43639 278 aa9.26□□□□□ -0.93
UBA3YPR066W SPB4P25808 606 aaPredicted RBP9.24□□□□□ -0.93
UBA3YPR066W VPS29P38759 282 aa9.24□□□□□ -0.93
UBA3YPR066W IFH1P39520 1085 aa9.23□□□□□ -0.93
UBA3YPR066W NSR1P27476 414 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
UBA3YPR066W COQ8P27697 501 aa9.16□□□□□ -0.94
UBA3YPR066W YAP5P40574 245 aa9.16□□□□□ -0.94
UBA3YPR066W KOG1P38873 1557 aa9.14□□□□□ -0.95
UBA3YPR066W YOR238WQ08634 303 aa9.13□□□□□ -0.95
UBA3YPR066W DMA2P53924 522 aa9.12□□□□□ -0.95
UBA3YPR066W HSL1P34244 1518 aa9.11□□□□□ -0.95
UBA3YPR066W DSF2P38213 736 aa9.1□□□□□ -0.95
UBA3YPR066W YMR1P47147 688 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
UBA3YPR066W STS1P38637 319 aa9.09□□□□□ -0.95
UBA3YPR066W PBS2P08018 668 aa9.08□□□□□ -0.96
UBA3YPR066W PIB1Q06651 286 aa9.08□□□□□ -0.96
UBA3YPR066W DBP1P24784 617 aaKnown RBP9.07□□□□□ -0.96
UBA3YPR066W NOP53Q12080 455 aaKnown RBP9.07□□□□□ -0.96
UBA3YPR066W EDS1P38073 919 aa9.06□□□□□ -0.96
UBA3YPR066W YFR006WP43590 535 aa9.06□□□□□ -0.96
UBA3YPR066W MST1P07236 462 aa9.05□□□□□ -0.96
UBA3YPR066W MIF2P35201 549 aa9.05□□□□□ -0.96
UBA3YPR066W SPT6P23615 1451 aaKnown RBP9.04□□□□□ -0.96
UBA3YPR066W GTT3P39996 337 aa8.98□□□□□ -0.97
UBA3YPR066W REF2P42073 533 aaPredicted RBP8.98□□□□□ -0.97
UBA3YPR066W YNR021WP53723 404 aaKnown RBP8.97□□□□□ -0.97
UBA3YPR066W MAM3Q12296 706 aa8.95□□□□□ -0.98
UBA3YPR066W PTC3P34221 468 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms