RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeastyeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP6AYPR052C INO80P53115 1489 aa10.27□□□□□ -0.77
NHP6AYPR052C MON2P48563 1636 aaPredicted RBP10.23□□□□□ -0.77
NHP6AYPR052C DNA2P38859 1522 aa9.72□□□□□ -0.85
NHP6AYPR052C SWR1Q05471 1514 aa9.66□□□□□ -0.86
NHP6AYPR052C KOG1P38873 1557 aa9.64□□□□□ -0.87
NHP6AYPR052C TCB3Q03640 1545 aaKnown RBP9.58□□□□□ -0.88
NHP6AYPR052C RSE1Q04693 1361 aaKnown RBP9.56□□□□□ -0.88
NHP6AYPR052C TY1B-DR4Q07793 1604 aa9.45□□□□□ -0.9
NHP6AYPR052C SGS1P35187 1447 aa9.24□□□□□ -0.93
NHP6AYPR052C SPT6P23615 1451 aaKnown RBP9.15□□□□□ -0.94
NHP6AYPR052C SPA2P23201 1466 aaKnown RBP9.13□□□□□ -0.95
NHP6AYPR052C HSL1P34244 1518 aa9.12□□□□□ -0.95
NHP6AYPR052C ECM5Q03214 1411 aa9.03□□□□□ -0.96
NHP6AYPR052C MTC1P47018 478 aaKnown RBP9.02□□□□□ -0.97
NHP6AYPR052C BUD4P47136 1447 aa8.98□□□□□ -0.97
NHP6AYPR052C THO2P53552 1597 aaKnown RBP8.96□□□□□ -0.97
NHP6AYPR052C HIR3P47171 1648 aa8.91□□□□□ -0.98
NHP6AYPR052C MDS3P53094 1487 aa8.88□□□□□ -0.99
NHP6AYPR052C REV3P14284 1504 aa8.76□□□□□ -1.01
NHP6AYPR052C XRN1P22147 1528 aaKnown RBP8.74□□□□□ -1.01
NHP6AYPR052C PEP1P32319 1579 aa8.71□□□□□ -1.02
NHP6AYPR052C BPT1P14772 1559 aa8.67□□□□□ -1.02
NHP6AYPR052C ATG2P53855 1592 aa8.62□□□□□ -1.03
NHP6AYPR052C YCF1P39109 1515 aaKnown RBP8.53□□□□□ -1.04
NHP6AYPR052C SKI3P17883 1432 aaKnown RBP8.52□□□□□ -1.05
NHP6AYPR052C SSK2P53599 1579 aa8.52□□□□□ -1.05
NHP6AYPR052C MIF2P35201 549 aa8.47□□□□□ -1.05
NHP6AYPR052C SIN3P22579 1536 aa8.46□□□□□ -1.05
NHP6AYPR052C TAF2P23255 1407 aa8.44□□□□□ -1.06
NHP6AYPR052C SSN2P38931 1420 aa8.39□□□□□ -1.07
NHP6AYPR052C UFD4P33202 1483 aa8.37□□□□□ -1.07
NHP6AYPR052C MET5P47169 1442 aa8.36□□□□□ -1.07
NHP6AYPR052C LTE1P07866 1435 aa8.33□□□□□ -1.08
NHP6AYPR052C ESP1Q03018 1630 aa8.31□□□□□ -1.08
NHP6AYPR052C MYO2P19524 1574 aaKnown RBP8.3□□□□□ -1.08
NHP6AYPR052C YPK9Q12697 1472 aa8.28□□□□□ -1.08
NHP6AYPR052C CHD1P32657 1468 aa8.27□□□□□ -1.09
NHP6AYPR052C CDC25P04821 1589 aa8.26□□□□□ -1.09
NHP6AYPR052C SCC2Q04002 1493 aa8.26□□□□□ -1.09
NHP6AYPR052C RQC2Q12532 1038 aaKnown RBP8.23□□□□□ -1.09
NHP6AYPR052C RPO31P04051 1460 aa8.22□□□□□ -1.09
NHP6AYPR052C GEA2P39993 1459 aaKnown RBP8.22□□□□□ -1.09
NHP6AYPR052C RKR1Q04781 1562 aa8.21□□□□□ -1.1
NHP6AYPR052C RPA190P10964 1664 aaKnown RBP8.2□□□□□ -1.1
NHP6AYPR052C ESC1Q03661 1658 aaKnown RBP8.2□□□□□ -1.1
NHP6AYPR052C PAN1P32521 1480 aa8.19□□□□□ -1.1
NHP6AYPR052C DNF1P32660 1571 aa8.18□□□□□ -1.1
NHP6AYPR052C DRS1P32892 752 aaKnown RBP8.18□□□□□ -1.1
NHP6AYPR052C ABP1P15891 592 aaKnown RBP8.16□□□□□ -1.1
NHP6AYPR052C YFR006WP43590 535 aa8.13□□□□□ -1.11
NHP6AYPR052C TRM732Q03496 1420 aa8.11□□□□□ -1.11
NHP6AYPR052C ITT1Q04638 464 aa8.1□□□□□ -1.11
NHP6AYPR052C TOP2P06786 1428 aaKnown RBP8.1□□□□□ -1.11
NHP6AYPR052C BNI1P41832 1953 aa8.1□□□□□ -1.11
NHP6AYPR052C MMS1Q06211 1407 aa8.08□□□□□ -1.12
NHP6AYPR052C DRS2P39524 1355 aa8.08□□□□□ -1.12
NHP6AYPR052C TY2B-LR1P0C2J3 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-FP0CX63 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-GR2P0CX64 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-CP25384 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-DR2Q03494 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY1B-DR1Q03855 1755 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-DR3Q07791 1770 aaKnown RBP8.07□□□□□ -1.12
NHP6AYPR052C TY2B-OR1Q12113 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-DR1Q12472 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C TY2B-OR2Q12501 1770 aa8.07□□□□□ -1.12
NHP6AYPR052C MMS22Q06164 1454 aa8.06□□□□□ -1.12
NHP6AYPR052C TY1B-BRQ12193 1756 aa8.06□□□□□ -1.12
NHP6AYPR052C TY1B-GR3Q12316 1755 aa8.06□□□□□ -1.12
NHP6AYPR052C TY1B-ORQ92393 1755 aa8.06□□□□□ -1.12
NHP6AYPR052C VPS15P22219 1454 aa8□□□□□ -1.13
NHP6AYPR052C NUP159P40477 1460 aa7.99□□□□□ -1.13
NHP6AYPR052C TY1B-HO13535 1793 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-DR5P0C2I2 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-DR6P0C2I3 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-LR2P0C2I5 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-LR3P0C2I6 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY1B-PR1P0C2I9 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY1B-PR2P0C2J0 1756 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-PR3P0C2J1 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY1B-JR1P47098 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-ML2Q03434 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY1B-ER1Q03612 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-ML1Q04711 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY1B-GR2Q12269 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-OLQ12273 1755 aa7.97□□□□□ -1.13
NHP6AYPR052C TY1B-PLQ12414 1755 aaKnown RBP7.97□□□□□ -1.13
NHP6AYPR052C TY2B-BQ12491 1770 aa7.97□□□□□ -1.13
NHP6AYPR052C IRC20Q06554 1556 aa7.95□□□□□ -1.14
NHP6AYPR052C SPP41P38904 1435 aa7.95□□□□□ -1.14
NHP6AYPR052C SMC4Q12267 1418 aa7.95□□□□□ -1.14
NHP6AYPR052C POL1P13382 1468 aa7.94□□□□□ -1.14
NHP6AYPR052C TY1B-DR3Q99231 1755 aa7.92□□□□□ -1.14
NHP6AYPR052C YOR1P53049 1477 aa7.89□□□□□ -1.15
NHP6AYPR052C TSC11P40061 1430 aa7.89□□□□□ -1.15
NHP6AYPR052C NTE1Q04958 1679 aa7.89□□□□□ -1.15
NHP6AYPR052C YRF1-1P0CX20 1796 aa7.88□□□□□ -1.15
NHP6AYPR052C YRF1-5P0CX21 1796 aa7.88□□□□□ -1.15
NHP6AYPR052C YRF1-8P0CX22 1796 aa7.88□□□□□ -1.15
NHP6AYPR052C DNF2Q12675 1612 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms