RNA–Protein interactions for RNA: YOR033C

EXO1, Transcript of 5'-3' exonuclease and flap-endonuclease, yeast

Gene EXO1, Length 2,109 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO1	YOR033C	DRS1	P32892	752 aa	Known RBP	9.24	□□□□□ -0.93
EXO1	YOR033C	MTC1	P47018	478 aa	Known RBP	9.01	□□□□□ -0.97
EXO1	YOR033C	RQC2	Q12532	1038 aa	Known RBP	8.44	□□□□□ -1.06
EXO1	YOR033C	BFR2	Q06631	534 aa	Known RBP	8.26	□□□□□ -1.09
EXO1	YOR033C	DIP2	Q12220	943 aa	Predicted RBP	7.81	□□□□□ -1.16
EXO1	YOR033C	AVT3	P36062	692 aa		7.74	□□□□□ -1.17
EXO1	YOR033C	TFA1	P36100	482 aa		7.68	□□□□□ -1.18
EXO1	YOR033C	URN1	Q06525	465 aa	Known RBP	7.51	□□□□□ -1.21
EXO1	YOR033C	TAF7	Q05021	590 aa		7.48	□□□□□ -1.21
EXO1	YOR033C	NOP2	P40991	618 aa	Known RBP	7.47	□□□□□ -1.21
EXO1	YOR033C	EBP2	P36049	427 aa	Known RBP	7.42	□□□□□ -1.22
EXO1	YOR033C	CAB3	P36076	571 aa		7.42	□□□□□ -1.22
EXO1	YOR033C	SIS2	P36024	562 aa		7.32	□□□□□ -1.24
EXO1	YOR033C	RSE1	Q04693	1361 aa	Known RBP	7.31	□□□□□ -1.24
EXO1	YOR033C	ISW2	Q08773	1120 aa		7.28	□□□□□ -1.24
EXO1	YOR033C	FAP1	P53971	965 aa		7.22	□□□□□ -1.25
EXO1	YOR033C	RPG1	P38249	964 aa	Known RBP	7.21	□□□□□ -1.26
EXO1	YOR033C	PRI1	P10363	409 aa		7.15	□□□□□ -1.27
EXO1	YOR033C	YFR016C	P43597	1233 aa	Known RBP	7.1	□□□□□ -1.27
EXO1	YOR033C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.07	□□□□□ -1.28	not detected
EXO1	YOR033C	RPL17A	P05740	184 aa	Known RBP	7.04	□□□□□ -1.28
EXO1	YOR033C	RPL17B	P46990	184 aa	Known RBP	7.04	□□□□□ -1.28
EXO1	YOR033C	YPR148C	Q06523	435 aa		7	□□□□□ -1.29
EXO1	YOR033C	AAD16	Q02895	342 aa		6.99	□□□□□ -1.29
EXO1	YOR033C	RPS0B	P46654	252 aa	Known RBP	6.98	□□□□□ -1.29
EXO1	YOR033C	REB1	P21538	810 aa		6.93	□□□□□ -1.3
EXO1	YOR033C	YRB30	P53107	440 aa	Predicted RBP	6.89	□□□□□ -1.31
EXO1	YOR033C	KRI1	P42846	591 aa	Known RBP	6.86	□□□□□ -1.31
EXO1	YOR033C	CWC22	P53333	577 aa	Known RBP	6.83	□□□□□ -1.32
EXO1	YOR033C	TSR3	Q12094	313 aa	Known RBP	6.82	□□□□□ -1.32
EXO1	YOR033C	SPT21	P35209	758 aa		6.79	□□□□□ -1.32
EXO1	YOR033C	PRY3	P47033	881 aa		6.76	□□□□□ -1.33
EXO1	YOR033C	MNN4	P36044	1178 aa		6.74	□□□□□ -1.33
EXO1	YOR033C	TCB2	P48231	1178 aa		6.73	□□□□□ -1.33
EXO1	YOR033C	NAP1	P25293	417 aa	Known RBP	6.72	□□□□□ -1.33
EXO1	YOR033C	RIM101	P33400	625 aa		6.72	□□□□□ -1.33
EXO1	YOR033C	DEF1	P35732	738 aa	Known RBP	6.7	□□□□□ -1.34
EXO1	YOR033C	AIM44	Q99299	758 aa		6.7	□□□□□ -1.34
EXO1	YOR033C	SKI3	P17883	1432 aa	Known RBP	6.67	□□□□□ -1.34
EXO1	YOR033C	LEO1	P38439	464 aa		6.67	□□□□□ -1.34
EXO1	YOR033C	ENV11	P53246	860 aa		6.65	□□□□□ -1.35
EXO1	YOR033C	IOC4	Q04213	475 aa		6.65	□□□□□ -1.35
EXO1	YOR033C	PTP3	P40048	928 aa		6.63	□□□□□ -1.35
EXO1	YOR033C	PSH1	Q12161	406 aa		6.63	□□□□□ -1.35
EXO1	YOR033C	NUG1	P40010	520 aa	Known RBP	6.61	□□□□□ -1.35
EXO1	YOR033C	QCR6	P00127	147 aa		6.59	□□□□□ -1.35
EXO1	YOR033C	NOP53	Q12080	455 aa	Known RBP	6.58	□□□□□ -1.36
EXO1	YOR033C	RLF2	Q12495	606 aa		6.58	□□□□□ -1.36
EXO1	YOR033C	FPR3	P38911	411 aa	Known RBP	6.56	□□□□□ -1.36
EXO1	YOR033C	SPT7	P35177	1332 aa		6.55	□□□□□ -1.36
EXO1	YOR033C	ENP1	P38333	483 aa	Known RBP	6.55	□□□□□ -1.36
EXO1	YOR033C	SPT2	P06843	333 aa	Predicted RBP	6.54	□□□□□ -1.36
EXO1	YOR033C	RNA1	P11745	407 aa	Known RBP	6.54	□□□□□ -1.36
EXO1	YOR033C	OXP1	P28273	1286 aa		6.53	□□□□□ -1.36
EXO1	YOR033C	YKR023W	P36119	530 aa	Known RBP	6.53	□□□□□ -1.36
EXO1	YOR033C	YGR130C	P53278	816 aa		6.53	□□□□□ -1.36
EXO1	YOR033C	MRPL32	P25348	183 aa		6.53	□□□□□ -1.36
EXO1	YOR033C	CLC1	P17891	233 aa		6.52	□□□□□ -1.37
EXO1	YOR033C	RLP24	Q07915	199 aa	Known RBP	6.52	□□□□□ -1.37
EXO1	YOR033C	SEC3	P33332	1336 aa	Known RBP	6.52	□□□□□ -1.37
EXO1	YOR033C	FPR4	Q06205	392 aa	Predicted RBP	6.51	□□□□□ -1.37
EXO1	YOR033C	SSP1	P38871	571 aa		6.5	□□□□□ -1.37
EXO1	YOR033C	FUN12	P39730	1002 aa	Known RBP	6.49	□□□□□ -1.37
EXO1	YOR033C	TCB3	Q03640	1545 aa	Known RBP	6.48	□□□□□ -1.37
EXO1	YOR033C	HSP82	P02829	709 aa	Known RBP	6.47	□□□□□ -1.37
EXO1	YOR033C	YAH1	Q12184	172 aa	Known RBP	6.47	□□□□□ -1.37
EXO1	YOR033C	RIX1	P38883	763 aa	Predicted RBP	6.47	□□□□□ -1.37
EXO1	YOR033C	SPA2	P23201	1466 aa	Known RBP	6.46	□□□□□ -1.37
EXO1	YOR033C	SNU71	P53207	620 aa	Known RBP	6.44	□□□□□ -1.38
EXO1	YOR033C	IFH1	P39520	1085 aa		6.43	□□□□□ -1.38
EXO1	YOR033C	YIL055C	P40523	627 aa	Known RBP	6.43	□□□□□ -1.38
EXO1	YOR033C	PLP2	Q12017	286 aa		6.43	□□□□□ -1.38
EXO1	YOR033C	TOP1	P04786	769 aa		6.41	□□□□□ -1.38
EXO1	YOR033C	HO	P09932	586 aa		6.41	□□□□□ -1.38
EXO1	YOR033C	IME2	P32581	645 aa		6.41	□□□□□ -1.38
EXO1	YOR033C	RPN1	P38764	993 aa	Known RBP	6.41	□□□□□ -1.38
EXO1	YOR033C	DMA1	P38823	416 aa		6.41	□□□□□ -1.38
EXO1	YOR033C	YCK3	P39962	524 aa		6.41	□□□□□ -1.38
EXO1	YOR033C	SGS1	P35187	1447 aa		6.4	□□□□□ -1.38
EXO1	YOR033C	SPC110	P32380	944 aa		6.4	□□□□□ -1.38
EXO1	YOR033C	NMD2	P38798	1089 aa	Known RBP	6.4	□□□□□ -1.39
EXO1	YOR033C	TFC8	Q12308	588 aa		6.4	□□□□□ -1.39
EXO1	YOR033C	YTA7	P40340	1379 aa		6.39	□□□□□ -1.39
EXO1	YOR033C	INO80	P53115	1489 aa		6.38	□□□□□ -1.39
EXO1	YOR033C	DCD1	P06773	312 aa		6.38	□□□□□ -1.39
EXO1	YOR033C	YLR271W	Q06152	274 aa		6.38	□□□□□ -1.39
EXO1	YOR033C	YNL011C	P53980	444 aa		6.37	□□□□□ -1.39
EXO1	YOR033C	SAS10	Q12136	610 aa	Predicted RBP	6.37	□□□□□ -1.39
EXO1	YOR033C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
EXO1	YOR033C	MDG1	P53885	366 aa		6.37	□□□□□ -1.39
EXO1	YOR033C	CDC27	P38042	758 aa		6.36	□□□□□ -1.39
EXO1	YOR033C	GRX3	Q03835	250 aa		6.35	□□□□□ -1.39
EXO1	YOR033C	PIL1	P53252	339 aa	Known RBP	6.35	□□□□□ -1.39
EXO1	YOR033C	EAF7	P53911	425 aa	Known RBP	6.35	□□□□□ -1.39
EXO1	YOR033C	HAA1	Q12753	694 aa	Known RBP	6.35	□□□□□ -1.39
EXO1	YOR033C	RPS0A	P32905	252 aa	Known RBP	6.34	□□□□□ -1.4
EXO1	YOR033C	STH1	P32597	1359 aa		6.33	□□□□□ -1.4
EXO1	YOR033C	RSM7	P47150	247 aa		6.32	□□□□□ -1.4
EXO1	YOR033C	DOS2	P54858	310 aa		6.31	□□□□□ -1.4
EXO1	YOR033C	VPS4	P52917	437 aa		6.3	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms