RNA–Protein interactions for RNA: YJL158C

CIS3, Transcript of Mannose-containing glycoprotein constituent of the cell wall, yeastyeast

Gene CIS3, Length 684 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIS3YJL158C INO80P53115 1489 aa11.21□□□□□ -0.61
CIS3YJL158C MON2P48563 1636 aaPredicted RBP11.19□□□□□ -0.62
CIS3YJL158C DNA2P38859 1522 aa10.69□□□□□ -0.7
CIS3YJL158C SWR1Q05471 1514 aa10.62□□□□□ -0.71
CIS3YJL158C KOG1P38873 1557 aa10.47□□□□□ -0.73
CIS3YJL158C TY1B-DR4Q07793 1604 aa10.44□□□□□ -0.74
CIS3YJL158C TCB3Q03640 1545 aaKnown RBP10.43□□□□□ -0.74
CIS3YJL158C RSE1Q04693 1361 aaKnown RBP10.37□□□□□ -0.75
CIS3YJL158C SGS1P35187 1447 aa10.24□□□□□ -0.77
CIS3YJL158C HSL1P34244 1518 aa10.06□□□□□ -0.8
CIS3YJL158C SPT6P23615 1451 aaKnown RBP10.05□□□□□ -0.8
CIS3YJL158C SPA2P23201 1466 aaKnown RBP9.94□□□□□ -0.82
CIS3YJL158C ECM5Q03214 1411 aa9.92□□□□□ -0.82
CIS3YJL158C DRS1P32892 752 aaKnown RBP9.86□□□□□ -0.83
CIS3YJL158C MTC1P47018 478 aaKnown RBP9.84□□□□□ -0.83
CIS3YJL158C HIR3P47171 1648 aa9.84□□□□□ -0.83
CIS3YJL158C BUD4P47136 1447 aa9.8□□□□□ -0.84
CIS3YJL158C THO2P53552 1597 aaKnown RBP9.76□□□□□ -0.85
CIS3YJL158C MDS3P53094 1487 aa9.72□□□□□ -0.85
CIS3YJL158C XRN1P22147 1528 aaKnown RBP9.65□□□□□ -0.86
CIS3YJL158C SSN2P38931 1420 aa9.62□□□□□ -0.87
CIS3YJL158C PEP1P32319 1579 aa9.6□□□□□ -0.87
CIS3YJL158C REV3P14284 1504 aa9.56□□□□□ -0.88
CIS3YJL158C ATG2P53855 1592 aa9.51□□□□□ -0.89
CIS3YJL158C BPT1P14772 1559 aa9.47□□□□□ -0.89
CIS3YJL158C TAF2P23255 1407 aa9.39□□□□□ -0.91
CIS3YJL158C SKI3P17883 1432 aaKnown RBP9.38□□□□□ -0.91
CIS3YJL158C YCF1P39109 1515 aaKnown RBP9.3□□□□□ -0.92
CIS3YJL158C SIN3P22579 1536 aa9.27□□□□□ -0.93
CIS3YJL158C SSK2P53599 1579 aa9.26□□□□□ -0.93
CIS3YJL158C UFD4P33202 1483 aa9.21□□□□□ -0.94
CIS3YJL158C ESP1Q03018 1630 aa9.18□□□□□ -0.94
CIS3YJL158C SCC2Q04002 1493 aa9.1□□□□□ -0.95
CIS3YJL158C MIF2P35201 549 aa9.08□□□□□ -0.96
CIS3YJL158C NOP2P40991 618 aaKnown RBP9.07□□□□□ -0.96
CIS3YJL158C YPK9Q12697 1472 aa9.07□□□□□ -0.96
CIS3YJL158C DNF1P32660 1571 aa9.07□□□□□ -0.96
CIS3YJL158C CHD1P32657 1468 aa9.06□□□□□ -0.96
CIS3YJL158C CDC25P04821 1589 aa9.05□□□□□ -0.96
CIS3YJL158C RQC2Q12532 1038 aaKnown RBP9.05□□□□□ -0.96
CIS3YJL158C MET5P47169 1442 aa9.05□□□□□ -0.96
CIS3YJL158C RPO31P04051 1460 aa9.03□□□□□ -0.96
CIS3YJL158C ESC1Q03661 1658 aaKnown RBP9□□□□□ -0.97
CIS3YJL158C MYO2P19524 1574 aaKnown RBP9□□□□□ -0.97
CIS3YJL158C TY2B-LR1P0C2J3 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-FP0CX63 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-GR2P0CX64 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-CP25384 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-DR2Q03494 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY1B-DR1Q03855 1755 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-DR3Q07791 1770 aaKnown RBP8.99□□□□□ -0.97
CIS3YJL158C TY2B-OR1Q12113 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-DR1Q12472 1770 aa8.99□□□□□ -0.97
CIS3YJL158C TY2B-OR2Q12501 1770 aa8.99□□□□□ -0.97
CIS3YJL158C LTE1P07866 1435 aa8.97□□□□□ -0.97
CIS3YJL158C TY1B-BRQ12193 1756 aa8.97□□□□□ -0.97
CIS3YJL158C TY1B-GR3Q12316 1755 aa8.97□□□□□ -0.97
CIS3YJL158C TY1B-ORQ92393 1755 aa8.97□□□□□ -0.97
CIS3YJL158C NSR1P27476 414 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
CIS3YJL158C PAN1P32521 1480 aa8.96□□□□□ -0.98
CIS3YJL158C RKR1Q04781 1562 aa8.95□□□□□ -0.98
CIS3YJL158C BFR2Q06631 534 aaKnown RBP8.94□□□□□ -0.98
CIS3YJL158C MMS22Q06164 1454 aa8.94□□□□□ -0.98
CIS3YJL158C BNI1P41832 1953 aa8.93□□□□□ -0.98
CIS3YJL158C RPA190P10964 1664 aaKnown RBP8.92□□□□□ -0.98
CIS3YJL158C ITT1Q04638 464 aa8.91□□□□□ -0.98
CIS3YJL158C TOP2P06786 1428 aaKnown RBP8.87□□□□□ -0.99
CIS3YJL158C TY2B-BQ12491 1770 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-HO13535 1793 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-DR5P0C2I2 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-DR6P0C2I3 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-LR2P0C2I5 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-LR3P0C2I6 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C TY1B-PR1P0C2I9 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C TY1B-PR2P0C2J0 1756 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-PR3P0C2J1 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C TY1B-JR1P47098 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-ML2Q03434 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C TY1B-ER1Q03612 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-ML1Q04711 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C TY1B-GR2Q12269 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-OLQ12273 1755 aa8.86□□□□□ -0.99
CIS3YJL158C TY1B-PLQ12414 1755 aaKnown RBP8.86□□□□□ -0.99
CIS3YJL158C GEA2P39993 1459 aaKnown RBP8.85□□□□□ -0.99
CIS3YJL158C ABP1P15891 592 aaKnown RBP8.85□□□□□ -0.99
CIS3YJL158C TY1B-DR3Q99231 1755 aa8.83□□□□□ -1
CIS3YJL158C TRM732Q03496 1420 aa8.81□□□□□ -1
CIS3YJL158C YFR006WP43590 535 aa8.8□□□□□ -1
CIS3YJL158C MMS1Q06211 1407 aa8.79□□□□□ -1
CIS3YJL158C YRF1-1P0CX20 1796 aa8.76□□□□□ -1.01
CIS3YJL158C YRF1-5P0CX21 1796 aa8.76□□□□□ -1.01
CIS3YJL158C YRF1-8P0CX22 1796 aa8.76□□□□□ -1.01
CIS3YJL158C NUP159P40477 1460 aa8.74□□□□□ -1.01
CIS3YJL158C POL1P13382 1468 aa8.72□□□□□ -1.01
CIS3YJL158C DRS2P39524 1355 aa8.72□□□□□ -1.01
CIS3YJL158C SPP41P38904 1435 aa8.71□□□□□ -1.01
CIS3YJL158C VPS15P22219 1454 aa8.71□□□□□ -1.01
CIS3YJL158C SMC4Q12267 1418 aa8.69□□□□□ -1.02
CIS3YJL158C YOR1P53049 1477 aa8.68□□□□□ -1.02
CIS3YJL158C STU1P38198 1513 aa8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms