RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeastyeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID28YIL017C DRS1P32892 752 aaKnown RBP7.91□□□□□ -1.14
VID28YIL017C MTC1P47018 478 aaKnown RBP7.54□□□□□ -1.2
VID28YIL017C BFR2Q06631 534 aaKnown RBP6.98□□□□□ -1.29
VID28YIL017C FAP1P53971 965 aa6.94□□□□□ -1.3
VID28YIL017C TFA1P36100 482 aa6.91□□□□□ -1.3
VID28YIL017C AVT3P36062 692 aa6.72□□□□□ -1.33
VID28YIL017C DIP2Q12220 943 aaPredicted RBP6.63□□□□□ -1.35
VID28YIL017C PRY3P47033 881 aa6.52□□□□□ -1.37
VID28YIL017C SPA2P23201 1466 aaKnown RBP6.37□□□□□ -1.39
VID28YIL017C SKI3P17883 1432 aaKnown RBP6.24□□□□□ -1.41
VID28YIL017C AAD16Q02895 342 aa6.21□□□□□ -1.42
VID28YIL017C PRI1P10363 409 aa6.12□□□□□ -1.43
VID28YIL017C HAA1Q12753 694 aaKnown RBP6.12□□□□□ -1.43
VID28YIL017C RSE1Q04693 1361 aaKnown RBP6.11□□□□□ -1.43
VID28YIL017C SSN2P38931 1420 aa6.08□□□□□ -1.44
VID28YIL017C RQC2Q12532 1038 aaKnown RBP6.08□□□□□ -1.44
VID28YIL017C SGS1P35187 1447 aa6.04□□□□□ -1.44
VID28YIL017C NOP2P40991 618 aaKnown RBP6□□□□□ -1.45
VID28YIL017C ISW2Q08773 1120 aa5.98□□□□□ -1.45
VID28YIL017C INO80P53115 1489 aa5.97□□□□□ -1.45
VID28YIL017C YCK3P39962 524 aa5.95□□□□□ -1.46
VID28YIL017C CHD1P32657 1468 aa5.94□□□□□ -1.46
VID28YIL017C RPG1P38249 964 aaKnown RBP5.93□□□□□ -1.46
VID28YIL017C RPL17AP05740 184 aaKnown RBP5.86□□□□□ -1.47
VID28YIL017C RPL17BP46990 184 aaKnown RBP5.86□□□□□ -1.47
VID28YIL017C DMA1P38823 416 aa5.82□□□□□ -1.48
VID28YIL017C TCB3Q03640 1545 aaKnown RBP5.8□□□□□ -1.48
VID28YIL017C NSR1P27476 414 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
VID28YIL017C SPT21P35209 758 aa5.78□□□□□ -1.48
VID28YIL017C RIM101P33400 625 aa5.77□□□□□ -1.49
VID28YIL017C TSR3Q12094 313 aaKnown RBP5.75□□□□□ -1.49
VID28YIL017C MMS22Q06164 1454 aa5.73□□□□□ -1.49
VID28YIL017C PTP3P40048 928 aa5.72□□□□□ -1.49
VID28YIL017C REB1P21538 810 aa5.71□□□□□ -1.5
VID28YIL017C EBP2P36049 427 aaKnown RBP5.71□□□□□ -1.5
VID28YIL017C UFD4P33202 1483 aa5.71□□□□□ -1.5
VID28YIL017C XRN1P22147 1528 aaKnown RBP5.7□□□□□ -1.5
VID28YIL017C CAB3P36076 571 aa5.68□□□□□ -1.5
VID28YIL017C SPP41P38904 1435 aa5.64□□□□□ -1.51
VID28YIL017C SSP1P38871 571 aa5.63□□□□□ -1.51
VID28YIL017C MRPL32P25348 183 aa5.62□□□□□ -1.51
VID28YIL017C OXP1P28273 1286 aa5.62□□□□□ -1.51
VID28YIL017C ENP1P38333 483 aaKnown RBP5.61□□□□□ -1.51
VID28YIL017C NUP170P38181 1502 aa5.6□□□□□ -1.51
VID28YIL017C STH1P32597 1359 aa5.6□□□□□ -1.51
VID28YIL017C TAF7Q05021 590 aa5.58□□□□□ -1.52
VID28YIL017C ECM5Q03214 1411 aa5.56□□□□□ -1.52
VID28YIL017C MON2P48563 1636 aaPredicted RBP5.56□□□□□ -1.52
VID28YIL017C YGL015CP33199 130 aa5.55□□□□□ -1.52
VID28YIL017C YLR271WQ06152 274 aa5.52□□□□□ -1.53
VID28YIL017C SIN3P22579 1536 aa5.52□□□□□ -1.53
VID28YIL017C PEP1P32319 1579 aa5.51□□□□□ -1.53
VID28YIL017C YKR023WP36119 530 aaKnown RBP5.51□□□□□ -1.53
VID28YIL017C URN1Q06525 465 aaKnown RBP5.51□□□□□ -1.53
VID28YIL017C TY1B-DR4Q07793 1604 aa5.5□□□□□ -1.53
VID28YIL017C SEC3P33332 1336 aaKnown RBP5.5□□□□□ -1.53
VID28YIL017C LEO1P38439 464 aa5.5□□□□□ -1.53
VID28YIL017C IKI3Q06706 1349 aaKnown RBP5.5□□□□□ -1.53
VID28YIL017C SIS2P36024 562 aa5.49□□□□□ -1.53
VID28YIL017C TRM732Q03496 1420 aa5.49□□□□□ -1.53
VID28YIL017C THO2P53552 1597 aaKnown RBP5.49□□□□□ -1.53
VID28YIL017C SPT6P23615 1451 aaKnown RBP5.48□□□□□ -1.53
VID28YIL017C YAH1Q12184 172 aaKnown RBP5.47□□□□□ -1.53
VID28YIL017C STU1P38198 1513 aa5.47□□□□□ -1.53
VID28YIL017C SAS10Q12136 610 aaPredicted RBP5.46□□□□□ -1.54
VID28YIL017C TCB2P48231 1178 aa5.44□□□□□ -1.54
VID28YIL017C SSK2P53599 1579 aa5.43□□□□□ -1.54
VID28YIL017C YPR148CQ06523 435 aa5.43□□□□□ -1.54
VID28YIL017C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
VID28YIL017C MLP2P40457 1679 aa5.42□□□□□ -1.54
VID28YIL017C HSL1P34244 1518 aa5.42□□□□□ -1.54
VID28YIL017C YTA7P40340 1379 aa5.42□□□□□ -1.54
VID28YIL017C POL1P13382 1468 aa5.41□□□□□ -1.54
VID28YIL017C YIL055CP40523 627 aaKnown RBP5.4□□□□□ -1.54
VID28YIL017C MGA2P40578 1113 aa5.4□□□□□ -1.55
VID28YIL017C IRC20Q06554 1556 aa5.4□□□□□ -1.55
VID28YIL017C MYO2P19524 1574 aaKnown RBP5.39□□□□□ -1.55
VID28YIL017C YLR419WQ06698 1435 aaKnown RBP5.38□□□□□ -1.55
VID28YIL017C RSM7P47150 247 aa5.38□□□□□ -1.55
VID28YIL017C MYO4P32492 1471 aa5.37□□□□□ -1.55
VID28YIL017C LEU3P08638 886 aa5.37□□□□□ -1.55
VID28YIL017C POL5P39985 1022 aaKnown RBP5.37□□□□□ -1.55
VID28YIL017C CST9Q06032 482 aa5.37□□□□□ -1.55
VID28YIL017C TFC8Q12308 588 aa5.37□□□□□ -1.55
VID28YIL017C REV3P14284 1504 aa5.36□□□□□ -1.55
VID28YIL017C PRS1P32895 427 aaKnown RBP5.36□□□□□ -1.55
VID28YIL017C SRB8P25648 1427 aa5.36□□□□□ -1.55
VID28YIL017C HIR3P47171 1648 aa5.36□□□□□ -1.55
VID28YIL017C HOP09932 586 aa5.34□□□□□ -1.55
VID28YIL017C PSD2P53037 1138 aaKnown RBP5.33□□□□□ -1.56
VID28YIL017C SMC4Q12267 1418 aa5.33□□□□□ -1.56
VID28YIL017C PDR10P51533 1564 aa5.33□□□□□ -1.56
VID28YIL017C RLF2Q12495 606 aa5.33□□□□□ -1.56
VID28YIL017C ESP1Q03018 1630 aa5.32□□□□□ -1.56
VID28YIL017C DCD1P06773 312 aa5.32□□□□□ -1.56
VID28YIL017C BUD4P47136 1447 aa5.32□□□□□ -1.56
VID28YIL017C CLC1P17891 233 aa5.31□□□□□ -1.56
VID28YIL017C TOP2P06786 1428 aaKnown RBP5.31□□□□□ -1.56
VID28YIL017C QCR6P00127 147 aa5.31□□□□□ -1.56
VID28YIL017C BUD31P25337 157 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms