RNA–Protein interactions for RNA: YHR191C

CTF8, Transcript of Subunit of a complex with Ctf18p, yeastyeast

Gene CTF8, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF8YHR191C MTC1P47018 478 aaKnown RBP10.59□□□□□ -0.71
CTF8YHR191C SPA2P23201 1466 aaKnown RBP10.36□□□□□ -0.75
CTF8YHR191C FAP1P53971 965 aa10.32□□□□□ -0.76
CTF8YHR191C SGS1P35187 1447 aa10.23□□□□□ -0.77
CTF8YHR191C SSN2P38931 1420 aa10.1□□□□□ -0.79
CTF8YHR191C INO80P53115 1489 aa9.92□□□□□ -0.82
CTF8YHR191C SKI3P17883 1432 aaKnown RBP9.9□□□□□ -0.83
CTF8YHR191C DRS1P32892 752 aaKnown RBP9.78□□□□□ -0.84
CTF8YHR191C PRY3P47033 881 aa9.72□□□□□ -0.85
CTF8YHR191C NOP2P40991 618 aaKnown RBP9.55□□□□□ -0.88
CTF8YHR191C CHD1P32657 1468 aa9.5□□□□□ -0.89
CTF8YHR191C TCB3Q03640 1545 aaKnown RBP9.5□□□□□ -0.89
CTF8YHR191C MMS22Q06164 1454 aa9.4□□□□□ -0.9
CTF8YHR191C AAD16Q02895 342 aa9.39□□□□□ -0.91
CTF8YHR191C BFR2Q06631 534 aaKnown RBP9.38□□□□□ -0.91
CTF8YHR191C NSR1P27476 414 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91 RIP-Chip
CTF8YHR191C PRI1P10363 409 aa9.35□□□□□ -0.91
CTF8YHR191C XRN1P22147 1528 aaKnown RBP9.32□□□□□ -0.92
CTF8YHR191C TY1B-DR4Q07793 1604 aa9.3□□□□□ -0.92
CTF8YHR191C HSL1P34244 1518 aa9.25□□□□□ -0.93
CTF8YHR191C UFD4P33202 1483 aa9.24□□□□□ -0.93
CTF8YHR191C SPT6P23615 1451 aaKnown RBP9.19□□□□□ -0.94
CTF8YHR191C HAA1Q12753 694 aaKnown RBP9.16□□□□□ -0.94
CTF8YHR191C THO2P53552 1597 aaKnown RBP9.16□□□□□ -0.94
CTF8YHR191C YCK3P39962 524 aa9.13□□□□□ -0.95
CTF8YHR191C SIN3P22579 1536 aa9.12□□□□□ -0.95
CTF8YHR191C HIR3P47171 1648 aa9.12□□□□□ -0.95
CTF8YHR191C SPP41P38904 1435 aa9.11□□□□□ -0.95
CTF8YHR191C REV3P14284 1504 aa9.1□□□□□ -0.95
CTF8YHR191C TRM732Q03496 1420 aa9.07□□□□□ -0.96
CTF8YHR191C ENP1P38333 483 aaKnown RBP9.07□□□□□ -0.96
CTF8YHR191C SSK2P53599 1579 aa9.07□□□□□ -0.96
CTF8YHR191C IKI3Q06706 1349 aaKnown RBP9.06□□□□□ -0.96
CTF8YHR191C STU1P38198 1513 aa9.05□□□□□ -0.96
CTF8YHR191C YTA7P40340 1379 aa9.04□□□□□ -0.96
CTF8YHR191C MYO2P19524 1574 aaKnown RBP9.02□□□□□ -0.97
CTF8YHR191C TAF2P23255 1407 aa8.99□□□□□ -0.97
CTF8YHR191C POL1P13382 1468 aa8.99□□□□□ -0.97
CTF8YHR191C MON2P48563 1636 aaPredicted RBP8.98□□□□□ -0.97
CTF8YHR191C ISW2Q08773 1120 aa8.97□□□□□ -0.97
CTF8YHR191C RSE1Q04693 1361 aaKnown RBP8.97□□□□□ -0.97
CTF8YHR191C NUP170P38181 1502 aa8.96□□□□□ -0.97
CTF8YHR191C ESP1Q03018 1630 aa8.94□□□□□ -0.98
CTF8YHR191C STH1P32597 1359 aa8.93□□□□□ -0.98
CTF8YHR191C POL5P39985 1022 aaKnown RBP8.92□□□□□ -0.98
CTF8YHR191C SEC3P33332 1336 aaKnown RBP8.9□□□□□ -0.98
CTF8YHR191C SAS10Q12136 610 aaPredicted RBP8.9□□□□□ -0.98
CTF8YHR191C CAB3P36076 571 aa8.88□□□□□ -0.99
CTF8YHR191C MYO4P32492 1471 aa8.88□□□□□ -0.99
CTF8YHR191C ECM5Q03214 1411 aa8.87□□□□□ -0.99
CTF8YHR191C BPT1P14772 1559 aa8.86□□□□□ -0.99
CTF8YHR191C SCC2Q04002 1493 aa8.86□□□□□ -0.99
CTF8YHR191C RPG1P38249 964 aaKnown RBP8.85□□□□□ -0.99
CTF8YHR191C TAF7Q05021 590 aa8.85□□□□□ -0.99
CTF8YHR191C SSM4P40318 1319 aa8.84□□□□□ -0.99
CTF8YHR191C EBP2P36049 427 aaKnown RBP8.83□□□□□ -1
CTF8YHR191C SMC4Q12267 1418 aa8.82□□□□□ -1
CTF8YHR191C DNA2P38859 1522 aa8.81□□□□□ -1
CTF8YHR191C YPK9Q12697 1472 aa8.8□□□□□ -1
CTF8YHR191C YOR1P53049 1477 aa8.79□□□□□ -1
CTF8YHR191C TFA1P36100 482 aa8.79□□□□□ -1
CTF8YHR191C SPT7P35177 1332 aa8.78□□□□□ -1
CTF8YHR191C MLP2P40457 1679 aa8.76□□□□□ -1.01
CTF8YHR191C SWR1Q05471 1514 aa8.75□□□□□ -1.01
CTF8YHR191C RKR1Q04781 1562 aa8.75□□□□□ -1.01
CTF8YHR191C PAN1P32521 1480 aa8.75□□□□□ -1.01
CTF8YHR191C TSR3Q12094 313 aaKnown RBP8.74□□□□□ -1.01
CTF8YHR191C SNQ2P32568 1501 aaKnown RBP8.74□□□□□ -1.01
CTF8YHR191C PRS1P32895 427 aaKnown RBP8.72□□□□□ -1.01
CTF8YHR191C BUD4P47136 1447 aa8.71□□□□□ -1.01
CTF8YHR191C PEP1P32319 1579 aa8.69□□□□□ -1.02
CTF8YHR191C PDR10P51533 1564 aa8.69□□□□□ -1.02
CTF8YHR191C RTT106P40161 455 aa8.67□□□□□ -1.02
CTF8YHR191C YPR148CQ06523 435 aa8.67□□□□□ -1.02
CTF8YHR191C GEA1P47102 1408 aaPredicted RBP8.66□□□□□ -1.02
CTF8YHR191C TSC11P40061 1430 aa8.65□□□□□ -1.02
CTF8YHR191C ATG2P53855 1592 aa8.65□□□□□ -1.03
CTF8YHR191C YCF1P39109 1515 aaKnown RBP8.63□□□□□ -1.03
CTF8YHR191C RQC2Q12532 1038 aaKnown RBP8.62□□□□□ -1.03
CTF8YHR191C PDR15Q04182 1529 aaKnown RBP8.62□□□□□ -1.03
CTF8YHR191C TOP2P06786 1428 aaKnown RBP8.62□□□□□ -1.03
CTF8YHR191C SRB8P25648 1427 aa8.62□□□□□ -1.03
CTF8YHR191C RPO31P04051 1460 aa8.61□□□□□ -1.03
CTF8YHR191C KOG1P38873 1557 aa8.61□□□□□ -1.03
CTF8YHR191C YLR419WQ06698 1435 aaKnown RBP8.6□□□□□ -1.03
CTF8YHR191C ULS1Q08562 1619 aa8.54□□□□□ -1.04
CTF8YHR191C NUP159P40477 1460 aa8.54□□□□□ -1.04
CTF8YHR191C IFH1P39520 1085 aa8.54□□□□□ -1.04
CTF8YHR191C MHP1P43638 1398 aa8.5□□□□□ -1.05
CTF8YHR191C TY3B-GQ99315 1547 aa8.5□□□□□ -1.05
CTF8YHR191C CLC1P17891 233 aa8.5□□□□□ -1.05
CTF8YHR191C IME2P32581 645 aa8.5□□□□□ -1.05
CTF8YHR191C TY1B-DR3Q99231 1755 aa8.5□□□□□ -1.05
CTF8YHR191C IRC20Q06554 1556 aa8.49□□□□□ -1.05
CTF8YHR191C VPS15P22219 1454 aa8.49□□□□□ -1.05
CTF8YHR191C MRPL32P25348 183 aa8.47□□□□□ -1.05
CTF8YHR191C TCB2P48231 1178 aa8.46□□□□□ -1.06
CTF8YHR191C DNF1P32660 1571 aa8.46□□□□□ -1.06
CTF8YHR191C ESC1Q03661 1658 aaKnown RBP8.46□□□□□ -1.06
CTF8YHR191C TY2B-LR1P0C2J3 1770 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms