RNA–Protein interactions for RNA: YGR245C

SDA1, Transcript of Protein required for actin organization and passage through Start, yeastyeast

Gene SDA1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDA1YGR245C DRS1P32892 752 aaKnown RBP11.88□□□□□ -0.51
SDA1YGR245C MTC1P47018 478 aaKnown RBP10.83□□□□□ -0.68
SDA1YGR245C TFA1P36100 482 aa10.79□□□□□ -0.68
SDA1YGR245C BFR2Q06631 534 aaKnown RBP10.69□□□□□ -0.7
SDA1YGR245C AVT3P36062 692 aa9.99□□□□□ -0.81
SDA1YGR245C RQC2Q12532 1038 aaKnown RBP9.98□□□□□ -0.81
SDA1YGR245C DIP2Q12220 943 aaPredicted RBP9.79□□□□□ -0.84
SDA1YGR245C TAF7Q05021 590 aa9.52□□□□□ -0.89
SDA1YGR245C DMA1P38823 416 aa9.3□□□□□ -0.92
SDA1YGR245C LEO1P38439 464 aa8.95□□□□□ -0.98
SDA1YGR245C RSE1Q04693 1361 aaKnown RBP8.91□□□□□ -0.98
SDA1YGR245C MON2P48563 1636 aaPredicted RBP8.81□□□□□ -1
SDA1YGR245C PTP3P40048 928 aa8.79□□□□□ -1
SDA1YGR245C INO80P53115 1489 aa8.76□□□□□ -1.01
SDA1YGR245C TCB3Q03640 1545 aaKnown RBP8.7□□□□□ -1.02
SDA1YGR245C SGS1P35187 1447 aa8.61□□□□□ -1.03
SDA1YGR245C TY1B-DR4Q07793 1604 aa8.57□□□□□ -1.04
SDA1YGR245C RPL17AP05740 184 aaKnown RBP8.54□□□□□ -1.04
SDA1YGR245C RPL17BP46990 184 aaKnown RBP8.54□□□□□ -1.04
SDA1YGR245C LEU3P08638 886 aa8.52□□□□□ -1.05
SDA1YGR245C ISW2Q08773 1120 aa8.51□□□□□ -1.05
SDA1YGR245C SSP1P38871 571 aa8.48□□□□□ -1.05
SDA1YGR245C SAS10Q12136 610 aaPredicted RBP8.48□□□□□ -1.05
SDA1YGR245C RIM101P33400 625 aa8.46□□□□□ -1.06
SDA1YGR245C SWR1Q05471 1514 aa8.45□□□□□ -1.06
SDA1YGR245C RPG1P38249 964 aaKnown RBP8.45□□□□□ -1.06
SDA1YGR245C SPT21P35209 758 aa8.38□□□□□ -1.07
SDA1YGR245C DMA2P53924 522 aa8.34□□□□□ -1.07
SDA1YGR245C KOG1P38873 1557 aa8.33□□□□□ -1.08
SDA1YGR245C REB1P21538 810 aa8.29□□□□□ -1.08
SDA1YGR245C ABP1P15891 592 aaKnown RBP8.28□□□□□ -1.08
SDA1YGR245C OXP1P28273 1286 aa8.28□□□□□ -1.08
SDA1YGR245C HSL1P34244 1518 aa8.27□□□□□ -1.09
SDA1YGR245C DNA2P38859 1522 aa8.26□□□□□ -1.09
SDA1YGR245C SPT6P23615 1451 aaKnown RBP8.25□□□□□ -1.09
SDA1YGR245C YAH1Q12184 172 aaKnown RBP8.22□□□□□ -1.09
SDA1YGR245C YLR271WQ06152 274 aa8.2□□□□□ -1.1
SDA1YGR245C RPN1P38764 993 aaKnown RBP8.18□□□□□ -1.1
SDA1YGR245C SPA2P23201 1466 aaKnown RBP8.17□□□□□ -1.1
SDA1YGR245C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
SDA1YGR245C PRI1P10363 409 aa8.15□□□□□ -1.1
SDA1YGR245C HIR3P47171 1648 aa8.1□□□□□ -1.11
SDA1YGR245C THO2P53552 1597 aaKnown RBP8.08□□□□□ -1.12
SDA1YGR245C RLF2Q12495 606 aa8.08□□□□□ -1.12
SDA1YGR245C SSN2P38931 1420 aa8.08□□□□□ -1.12
SDA1YGR245C MGA2P40578 1113 aa8.07□□□□□ -1.12
SDA1YGR245C CST9Q06032 482 aa8.03□□□□□ -1.12
SDA1YGR245C YIL055CP40523 627 aaKnown RBP8.01□□□□□ -1.13
SDA1YGR245C CKB1P43639 278 aa7.97□□□□□ -1.13
SDA1YGR245C BUD4P47136 1447 aa7.97□□□□□ -1.13
SDA1YGR245C SIN3P22579 1536 aa7.94□□□□□ -1.14
SDA1YGR245C XRN1P22147 1528 aaKnown RBP7.94□□□□□ -1.14
SDA1YGR245C IFH1P39520 1085 aa7.94□□□□□ -1.14
SDA1YGR245C SPB4P25808 606 aaPredicted RBP7.93□□□□□ -1.14
SDA1YGR245C RSM7P47150 247 aa7.93□□□□□ -1.14
SDA1YGR245C YKR023WP36119 530 aaKnown RBP7.9□□□□□ -1.14
SDA1YGR245C REV3P14284 1504 aa7.88□□□□□ -1.15
SDA1YGR245C ECM5Q03214 1411 aa7.88□□□□□ -1.15
SDA1YGR245C PSD2P53037 1138 aaKnown RBP7.86□□□□□ -1.15
SDA1YGR245C VPS70P47161 811 aa7.86□□□□□ -1.15
SDA1YGR245C YPR148CQ06523 435 aa7.86□□□□□ -1.15
SDA1YGR245C RAM2P29703 316 aa7.85□□□□□ -1.15
SDA1YGR245C SET1P38827 1080 aaKnown RBP7.85□□□□□ -1.15
SDA1YGR245C MDS3P53094 1487 aa7.84□□□□□ -1.15
SDA1YGR245C PEP1P32319 1579 aa7.82□□□□□ -1.16
SDA1YGR245C AAD16Q02895 342 aa7.82□□□□□ -1.16
SDA1YGR245C TSR3Q12094 313 aaKnown RBP7.81□□□□□ -1.16
SDA1YGR245C SSK2P53599 1579 aa7.81□□□□□ -1.16
SDA1YGR245C ATG2P53855 1592 aa7.81□□□□□ -1.16
SDA1YGR245C KIN1P13185 1064 aa7.78□□□□□ -1.16
SDA1YGR245C DSF2P38213 736 aa7.77□□□□□ -1.17
SDA1YGR245C AI2P03876 854 aa7.74□□□□□ -1.17
SDA1YGR245C MYO2P19524 1574 aaKnown RBP7.73□□□□□ -1.17
SDA1YGR245C HOP09932 586 aa7.72□□□□□ -1.17
SDA1YGR245C ESP1Q03018 1630 aa7.72□□□□□ -1.17
SDA1YGR245C YNR021WP53723 404 aaKnown RBP7.7□□□□□ -1.18
SDA1YGR245C RCR1P38212 213 aa7.7□□□□□ -1.18
SDA1YGR245C TFC8Q12308 588 aa7.7□□□□□ -1.18
SDA1YGR245C FAP1P53971 965 aa7.69□□□□□ -1.18
SDA1YGR245C PBS2P08018 668 aa7.69□□□□□ -1.18
SDA1YGR245C DCD1P06773 312 aa7.68□□□□□ -1.18
SDA1YGR245C YML020WQ03722 664 aa7.68□□□□□ -1.18
SDA1YGR245C YPK9Q12697 1472 aa7.67□□□□□ -1.18
SDA1YGR245C GLC3P32775 704 aa7.67□□□□□ -1.18
SDA1YGR245C ORC1P54784 914 aaPredicted RBP7.66□□□□□ -1.18
SDA1YGR245C GUA1P38625 525 aaKnown RBP7.66□□□□□ -1.18
SDA1YGR245C NOP8Q08287 484 aaPredicted RBP7.64□□□□□ -1.19
SDA1YGR245C BPT1P14772 1559 aa7.62□□□□□ -1.19
SDA1YGR245C AIM7Q12156 149 aa7.62□□□□□ -1.19
SDA1YGR245C TAF2P23255 1407 aa7.62□□□□□ -1.19
SDA1YGR245C DIT2P21595 489 aa7.6□□□□□ -1.19
SDA1YGR245C SKI3P17883 1432 aaKnown RBP7.6□□□□□ -1.19
SDA1YGR245C AIM44Q99299 758 aa7.59□□□□□ -1.19
SDA1YGR245C IOC4Q04213 475 aa7.58□□□□□ -1.2
SDA1YGR245C RPO31P04051 1460 aa7.58□□□□□ -1.2
SDA1YGR245C NUP42P49686 430 aaKnown RBP7.58□□□□□ -1.2
SDA1YGR245C NAP1P25293 417 aaKnown RBP7.57□□□□□ -1.2
SDA1YGR245C HGH1P48362 394 aaKnown RBP7.57□□□□□ -1.2
SDA1YGR245C SCC2Q04002 1493 aa7.57□□□□□ -1.2
SDA1YGR245C MRM1P25270 412 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms