RNA–Protein interactions for RNA: YGR169C-A

LSO2, Transcript of Putative protein of unknown function, yeastyeast

Gene LSO2, Length 279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSO2YGR169C-A MTC1P47018 478 aaKnown RBP7.27□□□□□ -1.25
LSO2YGR169C-A DRS1P32892 752 aaKnown RBP7.22□□□□□ -1.25
LSO2YGR169C-A BFR2Q06631 534 aaKnown RBP6.22□□□□□ -1.41
LSO2YGR169C-A DIP2Q12220 943 aaPredicted RBP6.19□□□□□ -1.42
LSO2YGR169C-A FAP1P53971 965 aa6.15□□□□□ -1.42
LSO2YGR169C-A AVT3P36062 692 aa6.12□□□□□ -1.43
LSO2YGR169C-A ISW2Q08773 1120 aa5.93□□□□□ -1.46
LSO2YGR169C-A TFA1P36100 482 aa5.91□□□□□ -1.46
LSO2YGR169C-A PRI1P10363 409 aa5.87□□□□□ -1.47
LSO2YGR169C-A RSE1Q04693 1361 aaKnown RBP5.86□□□□□ -1.47
LSO2YGR169C-A RPG1P38249 964 aaKnown RBP5.83□□□□□ -1.48
LSO2YGR169C-A PRY3P47033 881 aa5.82□□□□□ -1.48
LSO2YGR169C-A AAD16Q02895 342 aa5.79□□□□□ -1.48
LSO2YGR169C-A RPL17AP05740 184 aaKnown RBP5.61□□□□□ -1.51
LSO2YGR169C-A RPL17BP46990 184 aaKnown RBP5.61□□□□□ -1.51
LSO2YGR169C-A REB1P21538 810 aa5.54□□□□□ -1.52
LSO2YGR169C-A TSR3Q12094 313 aaKnown RBP5.53□□□□□ -1.52
LSO2YGR169C-A YCK3P39962 524 aa5.52□□□□□ -1.53
LSO2YGR169C-A HAA1Q12753 694 aaKnown RBP5.46□□□□□ -1.54
LSO2YGR169C-A SPT21P35209 758 aa5.43□□□□□ -1.54
LSO2YGR169C-A RIM101P33400 625 aa5.39□□□□□ -1.55
LSO2YGR169C-A MRPL32P25348 183 aa5.36□□□□□ -1.55
LSO2YGR169C-A YKR023WP36119 530 aaKnown RBP5.27□□□□□ -1.57
LSO2YGR169C-A OXP1P28273 1286 aa5.2□□□□□ -1.58
LSO2YGR169C-A TFC8Q12308 588 aa5.17□□□□□ -1.58
LSO2YGR169C-A CDC27P38042 758 aa5.14□□□□□ -1.59
LSO2YGR169C-A HOP09932 586 aa5.11□□□□□ -1.59
LSO2YGR169C-A SSP1P38871 571 aa5.11□□□□□ -1.59
LSO2YGR169C-A YIL055CP40523 627 aaKnown RBP5.11□□□□□ -1.59
LSO2YGR169C-A PTP3P40048 928 aa5.06□□□□□ -1.6
LSO2YGR169C-A RSM7P47150 247 aa5.06□□□□□ -1.6
LSO2YGR169C-A YGL015CP33199 130 aa5.05□□□□□ -1.6
LSO2YGR169C-A DCD1P06773 312 aa5.03□□□□□ -1.6
LSO2YGR169C-A YLR271WQ06152 274 aa5.03□□□□□ -1.6
LSO2YGR169C-A YAH1Q12184 172 aaKnown RBP5.03□□□□□ -1.6
LSO2YGR169C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
LSO2YGR169C-A BCH2P36122 765 aa5.01□□□□□ -1.61
LSO2YGR169C-A UBP10P53874 792 aaPredicted RBP4.99□□□□□ -1.61
LSO2YGR169C-A RQC2Q12532 1038 aaKnown RBP4.99□□□□□ -1.61
LSO2YGR169C-A MGA2P40578 1113 aa4.95□□□□□ -1.62
LSO2YGR169C-A AI2P03876 854 aa4.94□□□□□ -1.62
LSO2YGR169C-A BBC1P47068 1157 aa4.93□□□□□ -1.62
LSO2YGR169C-A MAP2P38174 421 aaKnown RBP4.92□□□□□ -1.62
LSO2YGR169C-A PSD2P53037 1138 aaKnown RBP4.92□□□□□ -1.62
LSO2YGR169C-A EPS1P40557 701 aa4.9□□□□□ -1.63
LSO2YGR169C-A SCY1P53009 804 aa4.9□□□□□ -1.63
LSO2YGR169C-A BDF1P35817 686 aa4.89□□□□□ -1.63
LSO2YGR169C-A SLX5P32828 619 aaKnown RBP4.84□□□□□ -1.63
LSO2YGR169C-A CST9Q06032 482 aa4.84□□□□□ -1.63
LSO2YGR169C-A BUD31P25337 157 aaPredicted RBP4.83□□□□□ -1.64
LSO2YGR169C-A DMA1P38823 416 aa4.79□□□□□ -1.64
LSO2YGR169C-A TGL3P40308 642 aa4.79□□□□□ -1.64
LSO2YGR169C-A TIF4632P39936 914 aaKnown RBP4.78□□□□□ -1.64
LSO2YGR169C-A MRM1P25270 412 aa4.77□□□□□ -1.65
LSO2YGR169C-A RTG3P38165 486 aa4.75□□□□□ -1.65
LSO2YGR169C-A NSR1P27476 414 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65 RIP-Chip
LSO2YGR169C-A RAM2P29703 316 aa4.71□□□□□ -1.66
LSO2YGR169C-A VPS29P38759 282 aa4.71□□□□□ -1.66
LSO2YGR169C-A RCR1P38212 213 aa4.67□□□□□ -1.66
LSO2YGR169C-A YMR1P47147 688 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
LSO2YGR169C-A MST1P07236 462 aa4.66□□□□□ -1.66
LSO2YGR169C-A YAP5P40574 245 aa4.66□□□□□ -1.66
LSO2YGR169C-A MAK11P20484 414 aaKnown RBP4.65□□□□□ -1.67
LSO2YGR169C-A NOP53Q12080 455 aaKnown RBP4.65□□□□□ -1.67
LSO2YGR169C-A SAS10Q12136 610 aaPredicted RBP4.64□□□□□ -1.67
LSO2YGR169C-A YOR238WQ08634 303 aa4.63□□□□□ -1.67
LSO2YGR169C-A DBP1P24784 617 aaKnown RBP4.62□□□□□ -1.67
LSO2YGR169C-A STS1P38637 319 aa4.6□□□□□ -1.67
LSO2YGR169C-A SET1P38827 1080 aaKnown RBP4.6□□□□□ -1.67
LSO2YGR169C-A IFH1P39520 1085 aa4.59□□□□□ -1.67
LSO2YGR169C-A COQ8P27697 501 aa4.58□□□□□ -1.68
LSO2YGR169C-A YPR148CQ06523 435 aa4.57□□□□□ -1.68
LSO2YGR169C-A YFR006WP43590 535 aa4.56□□□□□ -1.68
LSO2YGR169C-A SAM3Q08986 587 aa4.55□□□□□ -1.68
LSO2YGR169C-A VMA1P17255 1071 aaKnown RBP4.54□□□□□ -1.68
LSO2YGR169C-A CKB1P43639 278 aa4.54□□□□□ -1.68
LSO2YGR169C-A MIF2P35201 549 aa4.53□□□□□ -1.68
LSO2YGR169C-A EDS1P38073 919 aa4.53□□□□□ -1.68
LSO2YGR169C-A PTC3P34221 468 aaKnown RBP4.52□□□□□ -1.69
LSO2YGR169C-A PIB1Q06651 286 aa4.51□□□□□ -1.69
LSO2YGR169C-A SIS1P25294 352 aaKnown RBP4.5□□□□□ -1.69
LSO2YGR169C-A GTT3P39996 337 aa4.49□□□□□ -1.69
LSO2YGR169C-A VPS70P47161 811 aa4.49□□□□□ -1.69
LSO2YGR169C-A ABP1P15891 592 aaKnown RBP4.48□□□□□ -1.69
LSO2YGR169C-A GUT1P32190 709 aa4.48□□□□□ -1.69
LSO2YGR169C-A UBP9P39967 754 aa4.48□□□□□ -1.69
LSO2YGR169C-A MSB4Q12317 492 aa4.48□□□□□ -1.69
LSO2YGR169C-A GRE2Q12068 342 aaKnown RBP4.47□□□□□ -1.69
LSO2YGR169C-A GYP5Q12344 894 aa4.47□□□□□ -1.69
LSO2YGR169C-A LEU3P08638 886 aa4.46□□□□□ -1.7
LSO2YGR169C-A ATH1P48016 1211 aa4.46□□□□□ -1.7
LSO2YGR169C-A REF2P42073 533 aaPredicted RBP4.45□□□□□ -1.7
LSO2YGR169C-A EAP1P36041 632 aaKnown RBP4.44□□□□□ -1.7
LSO2YGR169C-A VNX1P42839 908 aa4.44□□□□□ -1.7
LSO2YGR169C-A YOL036WQ08206 761 aa4.44□□□□□ -1.7
LSO2YGR169C-A LEO1P38439 464 aa4.43□□□□□ -1.7
LSO2YGR169C-A MAK21Q12176 1025 aaKnown RBP4.43□□□□□ -1.7
LSO2YGR169C-A SPB4P25808 606 aaPredicted RBP4.42□□□□□ -1.7
LSO2YGR169C-A DSF2P38213 736 aa4.42□□□□□ -1.7
LSO2YGR169C-A UBP14P38237 781 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms