RNA–Protein interactions for RNA: YGR169C-A

LSO2, Transcript of Putative protein of unknown function, yeast

Gene LSO2, Length 279 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO2	YGR169C-A	MTC1	P47018	478 aa	Known RBP	7.27	□□□□□ -1.25
LSO2	YGR169C-A	DRS1	P32892	752 aa	Known RBP	7.22	□□□□□ -1.25
LSO2	YGR169C-A	BFR2	Q06631	534 aa	Known RBP	6.22	□□□□□ -1.41
LSO2	YGR169C-A	DIP2	Q12220	943 aa	Predicted RBP	6.19	□□□□□ -1.42
LSO2	YGR169C-A	FAP1	P53971	965 aa		6.15	□□□□□ -1.42
LSO2	YGR169C-A	AVT3	P36062	692 aa		6.12	□□□□□ -1.43
LSO2	YGR169C-A	ISW2	Q08773	1120 aa		5.93	□□□□□ -1.46
LSO2	YGR169C-A	TFA1	P36100	482 aa		5.91	□□□□□ -1.46
LSO2	YGR169C-A	PRI1	P10363	409 aa		5.87	□□□□□ -1.47
LSO2	YGR169C-A	RSE1	Q04693	1361 aa	Known RBP	5.86	□□□□□ -1.47
LSO2	YGR169C-A	RPG1	P38249	964 aa	Known RBP	5.83	□□□□□ -1.48
LSO2	YGR169C-A	PRY3	P47033	881 aa		5.82	□□□□□ -1.48
LSO2	YGR169C-A	AAD16	Q02895	342 aa		5.79	□□□□□ -1.48
LSO2	YGR169C-A	RPL17A	P05740	184 aa	Known RBP	5.61	□□□□□ -1.51
LSO2	YGR169C-A	RPL17B	P46990	184 aa	Known RBP	5.61	□□□□□ -1.51
LSO2	YGR169C-A	REB1	P21538	810 aa		5.54	□□□□□ -1.52
LSO2	YGR169C-A	TSR3	Q12094	313 aa	Known RBP	5.53	□□□□□ -1.52
LSO2	YGR169C-A	YCK3	P39962	524 aa		5.52	□□□□□ -1.53
LSO2	YGR169C-A	HAA1	Q12753	694 aa	Known RBP	5.46	□□□□□ -1.54
LSO2	YGR169C-A	SPT21	P35209	758 aa		5.43	□□□□□ -1.54
LSO2	YGR169C-A	RIM101	P33400	625 aa		5.39	□□□□□ -1.55
LSO2	YGR169C-A	MRPL32	P25348	183 aa		5.36	□□□□□ -1.55
LSO2	YGR169C-A	YKR023W	P36119	530 aa	Known RBP	5.27	□□□□□ -1.57
LSO2	YGR169C-A	OXP1	P28273	1286 aa		5.2	□□□□□ -1.58
LSO2	YGR169C-A	TFC8	Q12308	588 aa		5.17	□□□□□ -1.58
LSO2	YGR169C-A	CDC27	P38042	758 aa		5.14	□□□□□ -1.59
LSO2	YGR169C-A	HO	P09932	586 aa		5.11	□□□□□ -1.59
LSO2	YGR169C-A	SSP1	P38871	571 aa		5.11	□□□□□ -1.59
LSO2	YGR169C-A	YIL055C	P40523	627 aa	Known RBP	5.11	□□□□□ -1.59
LSO2	YGR169C-A	PTP3	P40048	928 aa		5.06	□□□□□ -1.6
LSO2	YGR169C-A	RSM7	P47150	247 aa		5.06	□□□□□ -1.6
LSO2	YGR169C-A	YGL015C	P33199	130 aa		5.05	□□□□□ -1.6
LSO2	YGR169C-A	DCD1	P06773	312 aa		5.03	□□□□□ -1.6
LSO2	YGR169C-A	YLR271W	Q06152	274 aa		5.03	□□□□□ -1.6
LSO2	YGR169C-A	YAH1	Q12184	172 aa	Known RBP	5.03	□□□□□ -1.6
LSO2	YGR169C-A	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
LSO2	YGR169C-A	BCH2	P36122	765 aa		5.01	□□□□□ -1.61
LSO2	YGR169C-A	UBP10	P53874	792 aa	Predicted RBP	4.99	□□□□□ -1.61
LSO2	YGR169C-A	RQC2	Q12532	1038 aa	Known RBP	4.99	□□□□□ -1.61
LSO2	YGR169C-A	MGA2	P40578	1113 aa		4.95	□□□□□ -1.62
LSO2	YGR169C-A	AI2	P03876	854 aa		4.94	□□□□□ -1.62
LSO2	YGR169C-A	BBC1	P47068	1157 aa		4.93	□□□□□ -1.62
LSO2	YGR169C-A	MAP2	P38174	421 aa	Known RBP	4.92	□□□□□ -1.62
LSO2	YGR169C-A	PSD2	P53037	1138 aa	Known RBP	4.92	□□□□□ -1.62
LSO2	YGR169C-A	EPS1	P40557	701 aa		4.9	□□□□□ -1.63
LSO2	YGR169C-A	SCY1	P53009	804 aa		4.9	□□□□□ -1.63
LSO2	YGR169C-A	BDF1	P35817	686 aa		4.89	□□□□□ -1.63
LSO2	YGR169C-A	SLX5	P32828	619 aa	Known RBP	4.84	□□□□□ -1.63
LSO2	YGR169C-A	CST9	Q06032	482 aa		4.84	□□□□□ -1.63
LSO2	YGR169C-A	BUD31	P25337	157 aa	Predicted RBP	4.83	□□□□□ -1.64
LSO2	YGR169C-A	DMA1	P38823	416 aa		4.79	□□□□□ -1.64
LSO2	YGR169C-A	TGL3	P40308	642 aa		4.79	□□□□□ -1.64
LSO2	YGR169C-A	TIF4632	P39936	914 aa	Known RBP	4.78	□□□□□ -1.64
LSO2	YGR169C-A	MRM1	P25270	412 aa		4.77	□□□□□ -1.65
LSO2	YGR169C-A	RTG3	P38165	486 aa		4.75	□□□□□ -1.65
LSO2	YGR169C-A	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	RIP-Chip
LSO2	YGR169C-A	RAM2	P29703	316 aa		4.71	□□□□□ -1.66
LSO2	YGR169C-A	VPS29	P38759	282 aa		4.71	□□□□□ -1.66
LSO2	YGR169C-A	RCR1	P38212	213 aa		4.67	□□□□□ -1.66
LSO2	YGR169C-A	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
LSO2	YGR169C-A	MST1	P07236	462 aa		4.66	□□□□□ -1.66
LSO2	YGR169C-A	YAP5	P40574	245 aa		4.66	□□□□□ -1.66
LSO2	YGR169C-A	MAK11	P20484	414 aa	Known RBP	4.65	□□□□□ -1.67
LSO2	YGR169C-A	NOP53	Q12080	455 aa	Known RBP	4.65	□□□□□ -1.67
LSO2	YGR169C-A	SAS10	Q12136	610 aa	Predicted RBP	4.64	□□□□□ -1.67
LSO2	YGR169C-A	YOR238W	Q08634	303 aa		4.63	□□□□□ -1.67
LSO2	YGR169C-A	DBP1	P24784	617 aa	Known RBP	4.62	□□□□□ -1.67
LSO2	YGR169C-A	STS1	P38637	319 aa		4.6	□□□□□ -1.67
LSO2	YGR169C-A	SET1	P38827	1080 aa	Known RBP	4.6	□□□□□ -1.67
LSO2	YGR169C-A	IFH1	P39520	1085 aa		4.59	□□□□□ -1.67
LSO2	YGR169C-A	COQ8	P27697	501 aa		4.58	□□□□□ -1.68
LSO2	YGR169C-A	YPR148C	Q06523	435 aa		4.57	□□□□□ -1.68
LSO2	YGR169C-A	YFR006W	P43590	535 aa		4.56	□□□□□ -1.68
LSO2	YGR169C-A	SAM3	Q08986	587 aa		4.55	□□□□□ -1.68
LSO2	YGR169C-A	VMA1	P17255	1071 aa	Known RBP	4.54	□□□□□ -1.68
LSO2	YGR169C-A	CKB1	P43639	278 aa		4.54	□□□□□ -1.68
LSO2	YGR169C-A	MIF2	P35201	549 aa		4.53	□□□□□ -1.68
LSO2	YGR169C-A	EDS1	P38073	919 aa		4.53	□□□□□ -1.68
LSO2	YGR169C-A	PTC3	P34221	468 aa	Known RBP	4.52	□□□□□ -1.69
LSO2	YGR169C-A	PIB1	Q06651	286 aa		4.51	□□□□□ -1.69
LSO2	YGR169C-A	SIS1	P25294	352 aa	Known RBP	4.5	□□□□□ -1.69
LSO2	YGR169C-A	GTT3	P39996	337 aa		4.49	□□□□□ -1.69
LSO2	YGR169C-A	VPS70	P47161	811 aa		4.49	□□□□□ -1.69
LSO2	YGR169C-A	ABP1	P15891	592 aa	Known RBP	4.48	□□□□□ -1.69
LSO2	YGR169C-A	GUT1	P32190	709 aa		4.48	□□□□□ -1.69
LSO2	YGR169C-A	UBP9	P39967	754 aa		4.48	□□□□□ -1.69
LSO2	YGR169C-A	MSB4	Q12317	492 aa		4.48	□□□□□ -1.69
LSO2	YGR169C-A	GRE2	Q12068	342 aa	Known RBP	4.47	□□□□□ -1.69
LSO2	YGR169C-A	GYP5	Q12344	894 aa		4.47	□□□□□ -1.69
LSO2	YGR169C-A	LEU3	P08638	886 aa		4.46	□□□□□ -1.7
LSO2	YGR169C-A	ATH1	P48016	1211 aa		4.46	□□□□□ -1.7
LSO2	YGR169C-A	REF2	P42073	533 aa	Predicted RBP	4.45	□□□□□ -1.7
LSO2	YGR169C-A	EAP1	P36041	632 aa	Known RBP	4.44	□□□□□ -1.7
LSO2	YGR169C-A	VNX1	P42839	908 aa		4.44	□□□□□ -1.7
LSO2	YGR169C-A	YOL036W	Q08206	761 aa		4.44	□□□□□ -1.7
LSO2	YGR169C-A	LEO1	P38439	464 aa		4.43	□□□□□ -1.7
LSO2	YGR169C-A	MAK21	Q12176	1025 aa	Known RBP	4.43	□□□□□ -1.7
LSO2	YGR169C-A	SPB4	P25808	606 aa	Predicted RBP	4.42	□□□□□ -1.7
LSO2	YGR169C-A	DSF2	P38213	736 aa		4.42	□□□□□ -1.7
LSO2	YGR169C-A	UBP14	P38237	781 aa	Known RBP	4.41	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms