RNA–Protein interactions for RNA: YGL171W

ROK1, Transcript of RNA-dependent ATPase, yeastyeast

Gene ROK1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROK1YGL171W FAP1P53971 965 aa9.96□□□□□ -0.82
ROK1YGL171W PRY3P47033 881 aa9.4□□□□□ -0.9
ROK1YGL171W MTC1P47018 478 aaKnown RBP9.26□□□□□ -0.93
ROK1YGL171W YCK3P39962 524 aa8.79□□□□□ -1
ROK1YGL171W AAD16Q02895 342 aa8.72□□□□□ -1.01
ROK1YGL171W HAA1Q12753 694 aaKnown RBP8.71□□□□□ -1.02
ROK1YGL171W PRI1P10363 409 aa8.59□□□□□ -1.03
ROK1YGL171W DRS1P32892 752 aaKnown RBP8.57□□□□□ -1.04
ROK1YGL171W TSR3Q12094 313 aaKnown RBP8.08□□□□□ -1.12
ROK1YGL171W ISW2Q08773 1120 aa8□□□□□ -1.13
ROK1YGL171W RPG1P38249 964 aaKnown RBP7.98□□□□□ -1.13
ROK1YGL171W TFA1P36100 482 aa7.95□□□□□ -1.14
ROK1YGL171W YGL015CP33199 130 aa7.83□□□□□ -1.16
ROK1YGL171W BFR2Q06631 534 aaKnown RBP7.79□□□□□ -1.16
ROK1YGL171W MRPL32P25348 183 aa7.76□□□□□ -1.17
ROK1YGL171W BUD31P25337 157 aaPredicted RBP7.76□□□□□ -1.17
ROK1YGL171W RQC2Q12532 1038 aaKnown RBP7.6□□□□□ -1.19
ROK1YGL171W TAF7Q05021 590 aa7.35□□□□□ -1.23
ROK1YGL171W SIS1P25294 352 aaKnown RBP7.28□□□□□ -1.24
ROK1YGL171W AVT3P36062 692 aa7.16□□□□□ -1.26
ROK1YGL171W CDC27P38042 758 aa7.11□□□□□ -1.27
ROK1YGL171W MAP2P38174 421 aaKnown RBP7.06□□□□□ -1.28
ROK1YGL171W RSE1Q04693 1361 aaKnown RBP7.05□□□□□ -1.28
ROK1YGL171W UBP10P53874 792 aaPredicted RBP7.05□□□□□ -1.28
ROK1YGL171W REB1P21538 810 aa7.03□□□□□ -1.28
ROK1YGL171W UBP9P39967 754 aa7.03□□□□□ -1.28
ROK1YGL171W DIP2Q12220 943 aaPredicted RBP6.98□□□□□ -1.29
ROK1YGL171W RPL17AP05740 184 aaKnown RBP6.93□□□□□ -1.3
ROK1YGL171W RPL17BP46990 184 aaKnown RBP6.93□□□□□ -1.3
ROK1YGL171W DMA1P38823 416 aa6.91□□□□□ -1.3
ROK1YGL171W TIF4632P39936 914 aaKnown RBP6.81□□□□□ -1.32
ROK1YGL171W TGL3P40308 642 aa6.8□□□□□ -1.32
ROK1YGL171W YKR023WP36119 530 aaKnown RBP6.76□□□□□ -1.33
ROK1YGL171W LEO1P38439 464 aa6.74□□□□□ -1.33
ROK1YGL171W SCY1P53009 804 aa6.68□□□□□ -1.34
ROK1YGL171W DCD1P06773 312 aa6.67□□□□□ -1.34
ROK1YGL171W SLX5P32828 619 aaKnown RBP6.66□□□□□ -1.34
ROK1YGL171W HOP09932 586 aa6.65□□□□□ -1.35
ROK1YGL171W TFC8Q12308 588 aa6.61□□□□□ -1.35
ROK1YGL171W SPT21P35209 758 aa6.48□□□□□ -1.37
ROK1YGL171W YBL029C-AQ3E756 94 aa6.48□□□□□ -1.37
ROK1YGL171W PTP3P40048 928 aa6.39□□□□□ -1.39
ROK1YGL171W LEU3P08638 886 aa6.36□□□□□ -1.39
ROK1YGL171W BCH2P36122 765 aa6.36□□□□□ -1.39
ROK1YGL171W YJL171CP46992 396 aa6.35□□□□□ -1.39
ROK1YGL171W VNX1P42839 908 aa6.34□□□□□ -1.39
ROK1YGL171W MST1P07236 462 aa6.33□□□□□ -1.4
ROK1YGL171W AIR2Q12476 344 aaKnown RBP6.3□□□□□ -1.4
ROK1YGL171W SPP1Q03012 353 aa6.29□□□□□ -1.4
ROK1YGL171W YOR238WQ08634 303 aa6.26□□□□□ -1.41
ROK1YGL171W SAS10Q12136 610 aaPredicted RBP6.24□□□□□ -1.41
ROK1YGL171W DMA2P53924 522 aa6.23□□□□□ -1.41
ROK1YGL171W FKH1P40466 484 aa6.2□□□□□ -1.42
ROK1YGL171W WSC3Q12215 556 aa6.19□□□□□ -1.42
ROK1YGL171W ABP1P15891 592 aaKnown RBP6.18□□□□□ -1.42
ROK1YGL171W SSP1P38871 571 aa6.14□□□□□ -1.43
ROK1YGL171W BMT6Q12291 365 aa6.12□□□□□ -1.43
ROK1YGL171W BDF1P35817 686 aa6.11□□□□□ -1.43
ROK1YGL171W TIF11P38912 153 aaKnown RBP6.11□□□□□ -1.43
ROK1YGL171W RPN1P38764 993 aaKnown RBP6.1□□□□□ -1.43
ROK1YGL171W RLF2Q12495 606 aa6.1□□□□□ -1.43
ROK1YGL171W IFH1P39520 1085 aa6.09□□□□□ -1.43
ROK1YGL171W EPS1P40557 701 aa6.09□□□□□ -1.43
ROK1YGL171W LDB19Q12502 818 aa6.04□□□□□ -1.44
ROK1YGL171W NSR1P27476 414 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
ROK1YGL171W RIM101P33400 625 aa6.01□□□□□ -1.45
ROK1YGL171W YAP5P40574 245 aa6.01□□□□□ -1.45
ROK1YGL171W AIM44Q99299 758 aa6.01□□□□□ -1.45
ROK1YGL171W NAP1P25293 417 aaKnown RBP6□□□□□ -1.45
ROK1YGL171W IOC4Q04213 475 aa5.98□□□□□ -1.45
ROK1YGL171W ULI1P43604 169 aa5.97□□□□□ -1.45
ROK1YGL171W RGA2Q06407 1009 aa5.96□□□□□ -1.46
ROK1YGL171W IOC2Q12072 812 aa5.96□□□□□ -1.46
ROK1YGL171W GTT3P39996 337 aa5.94□□□□□ -1.46
ROK1YGL171W CKB1P43639 278 aa5.94□□□□□ -1.46
ROK1YGL171W ORC1P54784 914 aaPredicted RBP5.94□□□□□ -1.46
ROK1YGL171W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
ROK1YGL171W YAH1Q12184 172 aaKnown RBP5.91□□□□□ -1.46
ROK1YGL171W OXP1P28273 1286 aa5.88□□□□□ -1.47
ROK1YGL171W YLR271WQ06152 274 aa5.87□□□□□ -1.47
ROK1YGL171W SPB4P25808 606 aaPredicted RBP5.84□□□□□ -1.47
ROK1YGL171W YML020WQ03722 664 aa5.83□□□□□ -1.48
ROK1YGL171W MGA2P40578 1113 aa5.82□□□□□ -1.48
ROK1YGL171W NCR1Q12200 1170 aa5.82□□□□□ -1.48
ROK1YGL171W RTG1P32607 177 aa5.8□□□□□ -1.48
ROK1YGL171W NOP8Q08287 484 aaPredicted RBP5.79□□□□□ -1.48
ROK1YGL171W BCK2P33306 851 aa5.78□□□□□ -1.48
ROK1YGL171W KIN1P13185 1064 aa5.75□□□□□ -1.49
ROK1YGL171W CST9Q06032 482 aa5.75□□□□□ -1.49
ROK1YGL171W BBC1P47068 1157 aa5.75□□□□□ -1.49
ROK1YGL171W EAP1P36041 632 aaKnown RBP5.74□□□□□ -1.49
ROK1YGL171W YIL055CP40523 627 aaKnown RBP5.74□□□□□ -1.49
ROK1YGL171W VPS70P47161 811 aa5.74□□□□□ -1.49
ROK1YGL171W YPR148CQ06523 435 aa5.73□□□□□ -1.49
ROK1YGL171W PIB1Q06651 286 aa5.73□□□□□ -1.49
ROK1YGL171W MSB4Q12317 492 aa5.72□□□□□ -1.49
ROK1YGL171W SLX8P40072 274 aa5.71□□□□□ -1.5
ROK1YGL171W HGH1P48362 394 aaKnown RBP5.71□□□□□ -1.5
ROK1YGL171W SET1P38827 1080 aaKnown RBP5.7□□□□□ -1.5
ROK1YGL171W TRP5P00931 707 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms