RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeastyeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMA1YGL008C DRS1P32892 752 aaKnown RBP10.37□□□□□ -0.75
PMA1YGL008C TFA1P36100 482 aa9.93□□□□□ -0.82
PMA1YGL008C BFR2Q06631 534 aaKnown RBP9.45□□□□□ -0.9
PMA1YGL008C RQC2Q12532 1038 aaKnown RBP9.38□□□□□ -0.91
PMA1YGL008C TAF7Q05021 590 aa9.32□□□□□ -0.92
PMA1YGL008C MTC1P47018 478 aaKnown RBP9.19□□□□□ -0.94
PMA1YGL008C AVT3P36062 692 aa8.87□□□□□ -0.99
PMA1YGL008C DMA1P38823 416 aa8.61□□□□□ -1.03
PMA1YGL008C LEO1P38439 464 aa8.51□□□□□ -1.05
PMA1YGL008C DIP2Q12220 943 aaPredicted RBP8.46□□□□□ -1.05
PMA1YGL008C ABP1P15891 592 aaKnown RBP8.1□□□□□ -1.11
PMA1YGL008C IFH1P39520 1085 aa7.99□□□□□ -1.13
PMA1YGL008C LEU3P08638 886 aa7.99□□□□□ -1.13
PMA1YGL008C IOC4Q04213 475 aa7.92□□□□□ -1.14
PMA1YGL008C SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
PMA1YGL008C DMA2P53924 522 aa7.86□□□□□ -1.15
PMA1YGL008C NAP1P25293 417 aaKnown RBP7.86□□□□□ -1.15
PMA1YGL008C ORC1P54784 914 aaPredicted RBP7.85□□□□□ -1.15
PMA1YGL008C PTP3P40048 928 aa7.75□□□□□ -1.17
PMA1YGL008C URN1Q06525 465 aaKnown RBP7.72□□□□□ -1.17
PMA1YGL008C RLF2Q12495 606 aa7.64□□□□□ -1.19
PMA1YGL008C RPN1P38764 993 aaKnown RBP7.54□□□□□ -1.2
PMA1YGL008C RSE1Q04693 1361 aaKnown RBP7.53□□□□□ -1.2
PMA1YGL008C AIM44Q99299 758 aa7.5□□□□□ -1.21
PMA1YGL008C SSP1P38871 571 aa7.48□□□□□ -1.21
PMA1YGL008C NOP8Q08287 484 aaPredicted RBP7.47□□□□□ -1.21
PMA1YGL008C CKB1P43639 278 aa7.42□□□□□ -1.22
PMA1YGL008C RIM101P33400 625 aa7.4□□□□□ -1.22
PMA1YGL008C YML020WQ03722 664 aa7.39□□□□□ -1.23
PMA1YGL008C SPT21P35209 758 aa7.31□□□□□ -1.24
PMA1YGL008C ATG36P46983 293 aa7.31□□□□□ -1.24
PMA1YGL008C TOP1P04786 769 aa7.28□□□□□ -1.24
PMA1YGL008C SNU71P53207 620 aaKnown RBP7.28□□□□□ -1.24
PMA1YGL008C OXP1P28273 1286 aa7.27□□□□□ -1.25
PMA1YGL008C MON2P48563 1636 aaPredicted RBP7.26□□□□□ -1.25
PMA1YGL008C YLR271WQ06152 274 aa7.25□□□□□ -1.25
PMA1YGL008C YRB30P53107 440 aaPredicted RBP7.2□□□□□ -1.26
PMA1YGL008C RPL17AP05740 184 aaKnown RBP7.2□□□□□ -1.26
PMA1YGL008C RPL17BP46990 184 aaKnown RBP7.2□□□□□ -1.26
PMA1YGL008C SLX8P40072 274 aa7.2□□□□□ -1.26
PMA1YGL008C MAM3Q12296 706 aa7.2□□□□□ -1.26
PMA1YGL008C MRX12P47084 519 aa7.19□□□□□ -1.26
PMA1YGL008C SWE1P32944 819 aa7.18□□□□□ -1.26
PMA1YGL008C YPR148CQ06523 435 aa7.17□□□□□ -1.26
PMA1YGL008C LAM6Q08001 693 aa7.17□□□□□ -1.26
PMA1YGL008C PAM1P37304 830 aaKnown RBP7.14□□□□□ -1.27
PMA1YGL008C KIN1P13185 1064 aa7.14□□□□□ -1.27
PMA1YGL008C CST9Q06032 482 aa7.12□□□□□ -1.27
PMA1YGL008C SUB2Q07478 446 aaKnown RBP7.11□□□□□ -1.27
PMA1YGL008C MGA2P40578 1113 aa7.1□□□□□ -1.27
PMA1YGL008C GEF1P37020 779 aa7.1□□□□□ -1.27
PMA1YGL008C DSF2P38213 736 aa7.1□□□□□ -1.27
PMA1YGL008C FAR11P53917 953 aa7.1□□□□□ -1.27
PMA1YGL008C SPB4P25808 606 aaPredicted RBP7.08□□□□□ -1.28
PMA1YGL008C GUA1P38625 525 aaKnown RBP7.08□□□□□ -1.28
PMA1YGL008C YAH1Q12184 172 aaKnown RBP7.07□□□□□ -1.28
PMA1YGL008C SSA1P10591 642 aaKnown RBP7.06□□□□□ -1.28
PMA1YGL008C SPC42P36094 363 aa7.06□□□□□ -1.28
PMA1YGL008C BRL1P38770 471 aa7.05□□□□□ -1.28
PMA1YGL008C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PMA1YGL008C TPO2P53283 614 aa7.03□□□□□ -1.28
PMA1YGL008C DOS2P54858 310 aa7.03□□□□□ -1.28
PMA1YGL008C NUG1P40010 520 aaKnown RBP7.03□□□□□ -1.28
PMA1YGL008C YNR021WP53723 404 aaKnown RBP7.03□□□□□ -1.28
PMA1YGL008C INO80P53115 1489 aa7.01□□□□□ -1.29
PMA1YGL008C OCA5P38738 679 aa7.01□□□□□ -1.29
PMA1YGL008C VPS70P47161 811 aa7.01□□□□□ -1.29
PMA1YGL008C YTA7P40340 1379 aa7□□□□□ -1.29
PMA1YGL008C RAM2P29703 316 aa7□□□□□ -1.29
PMA1YGL008C RPG1P38249 964 aaKnown RBP7□□□□□ -1.29
PMA1YGL008C SEN54Q02825 467 aaPredicted RBP7□□□□□ -1.29
PMA1YGL008C SET1P38827 1080 aaKnown RBP7□□□□□ -1.29
PMA1YGL008C ISW2Q08773 1120 aa7□□□□□ -1.29
PMA1YGL008C AIM7Q12156 149 aa6.99□□□□□ -1.29
PMA1YGL008C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29 RIP-Chip
PMA1YGL008C SGS1P35187 1447 aa6.98□□□□□ -1.29
PMA1YGL008C NOP7P53261 605 aaKnown RBP6.98□□□□□ -1.29
PMA1YGL008C GLC3P32775 704 aa6.97□□□□□ -1.29
PMA1YGL008C KRI1P42846 591 aaKnown RBP6.97□□□□□ -1.29
PMA1YGL008C TY1B-DR4Q07793 1604 aa6.96□□□□□ -1.3
PMA1YGL008C MDG1P53885 366 aa6.96□□□□□ -1.3
PMA1YGL008C TCB3Q03640 1545 aaKnown RBP6.96□□□□□ -1.3
PMA1YGL008C RRN6P32786 894 aa6.95□□□□□ -1.3
PMA1YGL008C NUP42P49686 430 aaKnown RBP6.94□□□□□ -1.3
PMA1YGL008C GLN1P32288 370 aaKnown RBP6.93□□□□□ -1.3
PMA1YGL008C BRN1P38170 754 aa6.93□□□□□ -1.3
PMA1YGL008C YFR016CP43597 1233 aaKnown RBP6.93□□□□□ -1.3
PMA1YGL008C PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
PMA1YGL008C SSF1P38789 453 aaPredicted RBP6.93□□□□□ -1.3
PMA1YGL008C GIN4Q12263 1142 aa6.93□□□□□ -1.3
PMA1YGL008C PBS2P08018 668 aa6.91□□□□□ -1.3
PMA1YGL008C DIT2P21595 489 aa6.91□□□□□ -1.3
PMA1YGL008C HPC2Q01448 625 aa6.91□□□□□ -1.3
PMA1YGL008C TFB3Q03290 321 aa6.9□□□□□ -1.3
PMA1YGL008C PKC1P24583 1151 aa6.9□□□□□ -1.31
PMA1YGL008C YJR008WP47085 338 aa6.9□□□□□ -1.31
PMA1YGL008C MET10P39692 1035 aa6.89□□□□□ -1.31
PMA1YGL008C REB1P21538 810 aa6.88□□□□□ -1.31
PMA1YGL008C SWR1Q05471 1514 aa6.87□□□□□ -1.31
PMA1YGL008C SSN2P38931 1420 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms