RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeastyeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL040WYFL040W DRS1P32892 752 aaKnown RBP12.87□□□□□ -0.35
YFL040WYFL040W MTC1P47018 478 aaKnown RBP12.75□□□□□ -0.37
YFL040WYFL040W BFR2Q06631 534 aaKnown RBP11.14□□□□□ -0.63
YFL040WYFL040W DIP2Q12220 943 aaPredicted RBP10.95□□□□□ -0.66
YFL040WYFL040W AVT3P36062 692 aa10.81□□□□□ -0.68
YFL040WYFL040W TFA1P36100 482 aa10.52□□□□□ -0.73
YFL040WYFL040W FAP1P53971 965 aa10.42□□□□□ -0.74
YFL040WYFL040W ISW2Q08773 1120 aa10.37□□□□□ -0.75
YFL040WYFL040W RSE1Q04693 1361 aaKnown RBP10.3□□□□□ -0.76
YFL040WYFL040W RPG1P38249 964 aaKnown RBP10.24□□□□□ -0.77
YFL040WYFL040W PRI1P10363 409 aa10.23□□□□□ -0.77
YFL040WYFL040W AAD16Q02895 342 aa10.04□□□□□ -0.8
YFL040WYFL040W RPL17AP05740 184 aaKnown RBP9.91□□□□□ -0.82
YFL040WYFL040W RPL17BP46990 184 aaKnown RBP9.91□□□□□ -0.82
YFL040WYFL040W REB1P21538 810 aa9.79□□□□□ -0.84
YFL040WYFL040W PRY3P47033 881 aa9.74□□□□□ -0.85
YFL040WYFL040W TSR3Q12094 313 aaKnown RBP9.71□□□□□ -0.85
YFL040WYFL040W SPT21P35209 758 aa9.55□□□□□ -0.88
YFL040WYFL040W RIM101P33400 625 aa9.44□□□□□ -0.9
YFL040WYFL040W MRPL32P25348 183 aa9.33□□□□□ -0.92
YFL040WYFL040W YKR023WP36119 530 aaKnown RBP9.24□□□□□ -0.93
YFL040WYFL040W YCK3P39962 524 aa9.22□□□□□ -0.93
YFL040WYFL040W HAA1Q12753 694 aaKnown RBP9.2□□□□□ -0.94
YFL040WYFL040W OXP1P28273 1286 aa9.16□□□□□ -0.94
YFL040WYFL040W PTP3P40048 928 aa9.15□□□□□ -0.94
YFL040WYFL040W HOP09932 586 aa9.05□□□□□ -0.96
YFL040WYFL040W TFC8Q12308 588 aa9.05□□□□□ -0.96
YFL040WYFL040W SSP1P38871 571 aa9.04□□□□□ -0.96
YFL040WYFL040W CDC27P38042 758 aa9.03□□□□□ -0.96
YFL040WYFL040W YIL055CP40523 627 aaKnown RBP9.03□□□□□ -0.96
YFL040WYFL040W YAH1Q12184 172 aaKnown RBP9.02□□□□□ -0.97
YFL040WYFL040W DCD1P06773 312 aa8.99□□□□□ -0.97
YFL040WYFL040W RQC2Q12532 1038 aaKnown RBP8.95□□□□□ -0.98
YFL040WYFL040W YLR271WQ06152 274 aa8.91□□□□□ -0.98
YFL040WYFL040W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
YFL040WYFL040W RSM7P47150 247 aa8.88□□□□□ -0.99
YFL040WYFL040W BCH2P36122 765 aa8.8□□□□□ -1
YFL040WYFL040W AI2P03876 854 aa8.72□□□□□ -1.01
YFL040WYFL040W MGA2P40578 1113 aa8.72□□□□□ -1.01
YFL040WYFL040W YGL015CP33199 130 aa8.69□□□□□ -1.02
YFL040WYFL040W DMA1P38823 416 aa8.69□□□□□ -1.02
YFL040WYFL040W BBC1P47068 1157 aa8.67□□□□□ -1.02
YFL040WYFL040W PSD2P53037 1138 aaKnown RBP8.66□□□□□ -1.02
YFL040WYFL040W UBP10P53874 792 aaPredicted RBP8.65□□□□□ -1.03
YFL040WYFL040W MAP2P38174 421 aaKnown RBP8.64□□□□□ -1.03
YFL040WYFL040W EPS1P40557 701 aa8.64□□□□□ -1.03
YFL040WYFL040W SCY1P53009 804 aa8.64□□□□□ -1.03
YFL040WYFL040W CST9Q06032 482 aa8.64□□□□□ -1.03
YFL040WYFL040W BDF1P35817 686 aa8.58□□□□□ -1.04
YFL040WYFL040W SLX5P32828 619 aaKnown RBP8.47□□□□□ -1.05
YFL040WYFL040W MRM1P25270 412 aa8.46□□□□□ -1.06
YFL040WYFL040W RTG3P38165 486 aa8.36□□□□□ -1.07
YFL040WYFL040W RCR1P38212 213 aa8.34□□□□□ -1.07
YFL040WYFL040W RAM2P29703 316 aa8.32□□□□□ -1.08
YFL040WYFL040W TIF4632P39936 914 aaKnown RBP8.3□□□□□ -1.08
YFL040WYFL040W VPS29P38759 282 aa8.25□□□□□ -1.09
YFL040WYFL040W TGL3P40308 642 aa8.25□□□□□ -1.09
YFL040WYFL040W SAS10Q12136 610 aaPredicted RBP8.21□□□□□ -1.1
YFL040WYFL040W MAK11P20484 414 aaKnown RBP8.2□□□□□ -1.1
YFL040WYFL040W YMR1P47147 688 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
YFL040WYFL040W SET1P38827 1080 aaKnown RBP8.17□□□□□ -1.1
YFL040WYFL040W NSR1P27476 414 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
YFL040WYFL040W STS1P38637 319 aa8.14□□□□□ -1.11
YFL040WYFL040W DBP1P24784 617 aaKnown RBP8.13□□□□□ -1.11
YFL040WYFL040W YOR238WQ08634 303 aa8.13□□□□□ -1.11
YFL040WYFL040W YAP5P40574 245 aa8.12□□□□□ -1.11
YFL040WYFL040W YFR006WP43590 535 aa8.11□□□□□ -1.11
YFL040WYFL040W COQ8P27697 501 aa8.08□□□□□ -1.12
YFL040WYFL040W PIB1Q06651 286 aa8.06□□□□□ -1.12
YFL040WYFL040W MIF2P35201 549 aa8.05□□□□□ -1.12
YFL040WYFL040W IFH1P39520 1085 aa8.04□□□□□ -1.12
YFL040WYFL040W YPR148CQ06523 435 aa8.03□□□□□ -1.12
YFL040WYFL040W EDS1P38073 919 aa8.01□□□□□ -1.13
YFL040WYFL040W VPS70P47161 811 aa8.01□□□□□ -1.13
YFL040WYFL040W NOP53Q12080 455 aaKnown RBP8.01□□□□□ -1.13
YFL040WYFL040W MST1P07236 462 aa8□□□□□ -1.13
YFL040WYFL040W VMA1P17255 1071 aaKnown RBP7.96□□□□□ -1.13
YFL040WYFL040W CKB1P43639 278 aa7.96□□□□□ -1.13
YFL040WYFL040W PTC3P34221 468 aaKnown RBP7.95□□□□□ -1.14
YFL040WYFL040W LEU3P08638 886 aa7.93□□□□□ -1.14
YFL040WYFL040W SPB4P25808 606 aaPredicted RBP7.9□□□□□ -1.14
YFL040WYFL040W GTT3P39996 337 aa7.9□□□□□ -1.14
YFL040WYFL040W LEO1P38439 464 aa7.89□□□□□ -1.15
YFL040WYFL040W SAM3Q08986 587 aa7.88□□□□□ -1.15
YFL040WYFL040W GRE2Q12068 342 aaKnown RBP7.85□□□□□ -1.15
YFL040WYFL040W ATH1P48016 1211 aa7.85□□□□□ -1.15
YFL040WYFL040W PBS2P08018 668 aa7.83□□□□□ -1.16
YFL040WYFL040W GUT1P32190 709 aa7.82□□□□□ -1.16
YFL040WYFL040W GYP5Q12344 894 aa7.82□□□□□ -1.16
YFL040WYFL040W REF2P42073 533 aaPredicted RBP7.81□□□□□ -1.16
YFL040WYFL040W DSF2P38213 736 aa7.8□□□□□ -1.16
YFL040WYFL040W YOL036WQ08206 761 aa7.79□□□□□ -1.16
YFL040WYFL040W SET4P42948 560 aa7.78□□□□□ -1.16
YFL040WYFL040W WSC3Q12215 556 aa7.77□□□□□ -1.17
YFL040WYFL040W ABP1P15891 592 aaKnown RBP7.74□□□□□ -1.17
YFL040WYFL040W DCW1P36091 449 aa7.74□□□□□ -1.17
YFL040WYFL040W MSB4Q12317 492 aa7.74□□□□□ -1.17
YFL040WYFL040W YGR273CP53329 174 aa7.74□□□□□ -1.17
YFL040WYFL040W RPN1P38764 993 aaKnown RBP7.73□□□□□ -1.17
YFL040WYFL040W SOL3P38858 249 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms