RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W DRS1P32892 752 aaKnown RBP13.57□□□□□ -0.24
SLX5YDL013W MTC1P47018 478 aaKnown RBP12.95□□□□□ -0.34
SLX5YDL013W BFR2Q06631 534 aaKnown RBP11.96□□□□□ -0.49
SLX5YDL013W TFA1P36100 482 aa11.61□□□□□ -0.55
SLX5YDL013W DIP2Q12220 943 aaPredicted RBP11.37□□□□□ -0.59
SLX5YDL013W AVT3P36062 692 aa11.36□□□□□ -0.59
SLX5YDL013W RQC2Q12532 1038 aaKnown RBP10.66□□□□□ -0.7
SLX5YDL013W RSE1Q04693 1361 aaKnown RBP10.57□□□□□ -0.72
SLX5YDL013W ISW2Q08773 1120 aa10.42□□□□□ -0.74
SLX5YDL013W RPG1P38249 964 aaKnown RBP10.28□□□□□ -0.76
SLX5YDL013W RPL17AP05740 184 aaKnown RBP10.15□□□□□ -0.79
SLX5YDL013W RPL17BP46990 184 aaKnown RBP10.15□□□□□ -0.79
SLX5YDL013W PRI1P10363 409 aa10.11□□□□□ -0.79
SLX5YDL013W FAP1P53971 965 aa10.04□□□□□ -0.8
SLX5YDL013W REB1P21538 810 aa9.98□□□□□ -0.81
SLX5YDL013W AAD16Q02895 342 aa9.85□□□□□ -0.83
SLX5YDL013W TAF7Q05021 590 aa9.83□□□□□ -0.84
SLX5YDL013W PTP3P40048 928 aa9.82□□□□□ -0.84
SLX5YDL013W SPT21P35209 758 aa9.81□□□□□ -0.84
SLX5YDL013W DMA1P38823 416 aa9.8□□□□□ -0.84
SLX5YDL013W RIM101P33400 625 aa9.79□□□□□ -0.84
SLX5YDL013W TSR3Q12094 313 aaKnown RBP9.65□□□□□ -0.86
SLX5YDL013W SSP1P38871 571 aa9.6□□□□□ -0.87
SLX5YDL013W OXP1P28273 1286 aa9.52□□□□□ -0.89
SLX5YDL013W YAH1Q12184 172 aaKnown RBP9.46□□□□□ -0.9
SLX5YDL013W URN1Q06525 465 aaKnown RBP9.41□□□□□ -0.9
SLX5YDL013W YKR023WP36119 530 aaKnown RBP9.38□□□□□ -0.91
SLX5YDL013W YIL055CP40523 627 aaKnown RBP9.38□□□□□ -0.91
SLX5YDL013W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
SLX5YDL013W PRY3P47033 881 aa9.36□□□□□ -0.91
SLX5YDL013W YLR271WQ06152 274 aa9.36□□□□□ -0.91
SLX5YDL013W MON2P48563 1636 aaPredicted RBP9.31□□□□□ -0.92
SLX5YDL013W INO80P53115 1489 aa9.27□□□□□ -0.93
SLX5YDL013W MRPL32P25348 183 aa9.25□□□□□ -0.93
SLX5YDL013W RSM7P47150 247 aa9.22□□□□□ -0.93
SLX5YDL013W HOP09932 586 aa9.21□□□□□ -0.94
SLX5YDL013W MGA2P40578 1113 aa9.21□□□□□ -0.94
SLX5YDL013W TFC8Q12308 588 aa9.19□□□□□ -0.94
SLX5YDL013W LEO1P38439 464 aa9.16□□□□□ -0.94
SLX5YDL013W SGS1P35187 1447 aa9.14□□□□□ -0.95
SLX5YDL013W DCD1P06773 312 aa9.13□□□□□ -0.95
SLX5YDL013W CST9Q06032 482 aa9.11□□□□□ -0.95
SLX5YDL013W SAS10Q12136 610 aaPredicted RBP9.08□□□□□ -0.96
SLX5YDL013W TCB3Q03640 1545 aaKnown RBP9.06□□□□□ -0.96
SLX5YDL013W CDC27P38042 758 aa9.06□□□□□ -0.96
SLX5YDL013W AI2P03876 854 aa9.04□□□□□ -0.96
SLX5YDL013W PSD2P53037 1138 aaKnown RBP9.04□□□□□ -0.96
SLX5YDL013W TY1B-DR4Q07793 1604 aa9.03□□□□□ -0.96
SLX5YDL013W SWR1Q05471 1514 aa8.98□□□□□ -0.97
SLX5YDL013W LEU3P08638 886 aa8.97□□□□□ -0.97
SLX5YDL013W BCH2P36122 765 aa8.96□□□□□ -0.97
SLX5YDL013W SIS2P36024 562 aa8.93□□□□□ -0.98
SLX5YDL013W BBC1P47068 1157 aa8.93□□□□□ -0.98
SLX5YDL013W EBP2P36049 427 aaKnown RBP8.88□□□□□ -0.99
SLX5YDL013W YCK3P39962 524 aa8.88□□□□□ -0.99
SLX5YDL013W DNA2P38859 1522 aa8.86□□□□□ -0.99
SLX5YDL013W HAA1Q12753 694 aaKnown RBP8.85□□□□□ -0.99
SLX5YDL013W RAM2P29703 316 aa8.83□□□□□ -1
SLX5YDL013W EPS1P40557 701 aa8.83□□□□□ -1
SLX5YDL013W CAB3P36076 571 aa8.82□□□□□ -1
SLX5YDL013W HSL1P34244 1518 aa8.8□□□□□ -1
SLX5YDL013W MRM1P25270 412 aa8.79□□□□□ -1
SLX5YDL013W BDF1P35817 686 aa8.77□□□□□ -1.01
SLX5YDL013W SET1P38827 1080 aaKnown RBP8.77□□□□□ -1.01
SLX5YDL013W SPT6P23615 1451 aaKnown RBP8.76□□□□□ -1.01
SLX5YDL013W KOG1P38873 1557 aa8.76□□□□□ -1.01
SLX5YDL013W RCR1P38212 213 aa8.75□□□□□ -1.01
SLX5YDL013W YFR016CP43597 1233 aaKnown RBP8.72□□□□□ -1.01
SLX5YDL013W YRB30P53107 440 aaPredicted RBP8.7□□□□□ -1.02
SLX5YDL013W RTG3P38165 486 aa8.7□□□□□ -1.02
SLX5YDL013W SCY1P53009 804 aa8.7□□□□□ -1.02
SLX5YDL013W RPN1P38764 993 aaKnown RBP8.69□□□□□ -1.02
SLX5YDL013W SPA2P23201 1466 aaKnown RBP8.69□□□□□ -1.02
SLX5YDL013W VPS70P47161 811 aa8.68□□□□□ -1.02
SLX5YDL013W SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
SLX5YDL013W YPR148CQ06523 435 aa8.67□□□□□ -1.02
SLX5YDL013W CKB1P43639 278 aa8.66□□□□□ -1.02
SLX5YDL013W NAP1P25293 417 aaKnown RBP8.65□□□□□ -1.02
SLX5YDL013W IFH1P39520 1085 aa8.64□□□□□ -1.03
SLX5YDL013W NOP2P40991 618 aaKnown RBP8.64□□□□□ -1.03
SLX5YDL013W MAK11P20484 414 aaKnown RBP8.64□□□□□ -1.03
SLX5YDL013W HIR3P47171 1648 aa8.61□□□□□ -1.03
SLX5YDL013W MAP2P38174 421 aaKnown RBP8.6□□□□□ -1.03
SLX5YDL013W UBP10P53874 792 aaPredicted RBP8.58□□□□□ -1.04
SLX5YDL013W RPS0BP46654 252 aaKnown RBP8.57□□□□□ -1.04
SLX5YDL013W DMA2P53924 522 aa8.57□□□□□ -1.04
SLX5YDL013W IOC4Q04213 475 aa8.57□□□□□ -1.04
SLX5YDL013W SSN2P38931 1420 aa8.56□□□□□ -1.04
SLX5YDL013W VPS29P38759 282 aa8.55□□□□□ -1.04
SLX5YDL013W COQ8P27697 501 aa8.52□□□□□ -1.05
SLX5YDL013W KRI1P42846 591 aaKnown RBP8.51□□□□□ -1.05
SLX5YDL013W DSF2P38213 736 aa8.5□□□□□ -1.05
SLX5YDL013W XRN1P22147 1528 aaKnown RBP8.5□□□□□ -1.05
SLX5YDL013W PBS2P08018 668 aa8.49□□□□□ -1.05
SLX5YDL013W SLX5P32828 619 aaKnown RBP8.49□□□□□ -1.05
SLX5YDL013W YGL015CP33199 130 aa8.46□□□□□ -1.06
SLX5YDL013W YMR1P47147 688 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
SLX5YDL013W AIM44Q99299 758 aa8.45□□□□□ -1.06
SLX5YDL013W ECM5Q03214 1411 aa8.44□□□□□ -1.06
SLX5YDL013W MIF2P35201 549 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms