RNA–Protein interactions for RNA: YBR065C

ECM2, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene ECM2, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM2YBR065C DRS1P32892 752 aaKnown RBP16.31■□□□□ 0.2
ECM2YBR065C MTC1P47018 478 aaKnown RBP16.25■□□□□ 0.19
ECM2YBR065C BFR2Q06631 534 aaKnown RBP14.13□□□□□ -0.15
ECM2YBR065C DIP2Q12220 943 aaPredicted RBP13.91□□□□□ -0.18
ECM2YBR065C AVT3P36062 692 aa13.78□□□□□ -0.2
ECM2YBR065C TFA1P36100 482 aa13.39□□□□□ -0.27
ECM2YBR065C FAP1P53971 965 aa13.21□□□□□ -0.29
ECM2YBR065C ISW2Q08773 1120 aa13.2□□□□□ -0.3
ECM2YBR065C RSE1Q04693 1361 aaKnown RBP13.11□□□□□ -0.31
ECM2YBR065C PRI1P10363 409 aa13.05□□□□□ -0.32
ECM2YBR065C RPG1P38249 964 aaKnown RBP13.01□□□□□ -0.33
ECM2YBR065C AAD16Q02895 342 aa12.81□□□□□ -0.36
ECM2YBR065C RPL17AP05740 184 aaKnown RBP12.6□□□□□ -0.39
ECM2YBR065C RPL17BP46990 184 aaKnown RBP12.6□□□□□ -0.39
ECM2YBR065C REB1P21538 810 aa12.42□□□□□ -0.42
ECM2YBR065C PRY3P47033 881 aa12.37□□□□□ -0.43
ECM2YBR065C TSR3Q12094 313 aaKnown RBP12.36□□□□□ -0.43
ECM2YBR065C SPT21P35209 758 aa12.2□□□□□ -0.46
ECM2YBR065C RQC2Q12532 1038 aaKnown RBP12.12□□□□□ -0.47
ECM2YBR065C RIM101P33400 625 aa12.06□□□□□ -0.48
ECM2YBR065C MRPL32P25348 183 aa11.88□□□□□ -0.51
ECM2YBR065C YCK3P39962 524 aa11.81□□□□□ -0.52
ECM2YBR065C YKR023WP36119 530 aaKnown RBP11.79□□□□□ -0.52
ECM2YBR065C HAA1Q12753 694 aaKnown RBP11.75□□□□□ -0.53
ECM2YBR065C OXP1P28273 1286 aa11.67□□□□□ -0.54
ECM2YBR065C PTP3P40048 928 aa11.56□□□□□ -0.56
ECM2YBR065C TFC8Q12308 588 aa11.55□□□□□ -0.56
ECM2YBR065C CDC27P38042 758 aa11.51□□□□□ -0.57
ECM2YBR065C HOP09932 586 aa11.5□□□□□ -0.57
ECM2YBR065C SSP1P38871 571 aa11.5□□□□□ -0.57
ECM2YBR065C YIL055CP40523 627 aaKnown RBP11.46□□□□□ -0.57
ECM2YBR065C YAH1Q12184 172 aaKnown RBP11.41□□□□□ -0.58
ECM2YBR065C DCD1P06773 312 aa11.39□□□□□ -0.59
ECM2YBR065C YLR271WQ06152 274 aa11.34□□□□□ -0.59
ECM2YBR065C RSM7P47150 247 aa11.31□□□□□ -0.6
ECM2YBR065C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
ECM2YBR065C BCH2P36122 765 aa11.21□□□□□ -0.61
ECM2YBR065C DMA1P38823 416 aa11.18□□□□□ -0.62
ECM2YBR065C AI2P03876 854 aa11.1□□□□□ -0.63
ECM2YBR065C MGA2P40578 1113 aa11.1□□□□□ -0.63
ECM2YBR065C YGL015CP33199 130 aa11.09□□□□□ -0.63
ECM2YBR065C PSD2P53037 1138 aaKnown RBP11.06□□□□□ -0.64
ECM2YBR065C UBP10P53874 792 aaPredicted RBP11.05□□□□□ -0.64
ECM2YBR065C TAF7Q05021 590 aa11.03□□□□□ -0.64
ECM2YBR065C BBC1P47068 1157 aa11.02□□□□□ -0.65
ECM2YBR065C MAP2P38174 421 aaKnown RBP11□□□□□ -0.65
ECM2YBR065C EPS1P40557 701 aa11□□□□□ -0.65
ECM2YBR065C SCY1P53009 804 aa10.99□□□□□ -0.65
ECM2YBR065C CST9Q06032 482 aa10.98□□□□□ -0.65
ECM2YBR065C BDF1P35817 686 aa10.94□□□□□ -0.66
ECM2YBR065C SLX5P32828 619 aaKnown RBP10.79□□□□□ -0.68
ECM2YBR065C MRM1P25270 412 aa10.74□□□□□ -0.69
ECM2YBR065C RTG3P38165 486 aa10.63□□□□□ -0.71
ECM2YBR065C RAM2P29703 316 aa10.62□□□□□ -0.71
ECM2YBR065C RCR1P38212 213 aa10.6□□□□□ -0.71
ECM2YBR065C LEO1P38439 464 aa10.58□□□□□ -0.72
ECM2YBR065C TIF4632P39936 914 aaKnown RBP10.57□□□□□ -0.72
ECM2YBR065C TGL3P40308 642 aa10.55□□□□□ -0.72
ECM2YBR065C VPS29P38759 282 aa10.53□□□□□ -0.72
ECM2YBR065C SAS10Q12136 610 aaPredicted RBP10.48□□□□□ -0.73
ECM2YBR065C NSR1P27476 414 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
ECM2YBR065C MAK11P20484 414 aaKnown RBP10.45□□□□□ -0.74
ECM2YBR065C YMR1P47147 688 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74not detected
ECM2YBR065C SET1P38827 1080 aaKnown RBP10.39□□□□□ -0.75
ECM2YBR065C STS1P38637 319 aa10.37□□□□□ -0.75
ECM2YBR065C YAP5P40574 245 aa10.35□□□□□ -0.75
ECM2YBR065C YOR238WQ08634 303 aa10.35□□□□□ -0.75
ECM2YBR065C DBP1P24784 617 aaKnown RBP10.34□□□□□ -0.75
ECM2YBR065C COQ8P27697 501 aa10.29□□□□□ -0.76
ECM2YBR065C YFR006WP43590 535 aa10.29□□□□□ -0.76
ECM2YBR065C YPR148CQ06523 435 aa10.28□□□□□ -0.76
ECM2YBR065C NOP53Q12080 455 aaKnown RBP10.28□□□□□ -0.76
ECM2YBR065C MST1P07236 462 aa10.27□□□□□ -0.77
ECM2YBR065C IFH1P39520 1085 aa10.26□□□□□ -0.77
ECM2YBR065C MIF2P35201 549 aa10.21□□□□□ -0.77
ECM2YBR065C EDS1P38073 919 aa10.21□□□□□ -0.77
ECM2YBR065C PIB1Q06651 286 aa10.2□□□□□ -0.78
ECM2YBR065C VMA1P17255 1071 aaKnown RBP10.16□□□□□ -0.78
ECM2YBR065C CKB1P43639 278 aa10.16□□□□□ -0.78
ECM2YBR065C VPS70P47161 811 aa10.16□□□□□ -0.78
ECM2YBR065C LEU3P08638 886 aa10.14□□□□□ -0.79
ECM2YBR065C PTC3P34221 468 aaKnown RBP10.13□□□□□ -0.79
ECM2YBR065C SAM3Q08986 587 aa10.1□□□□□ -0.79
ECM2YBR065C GTT3P39996 337 aa10.03□□□□□ -0.8
ECM2YBR065C GRE2Q12068 342 aaKnown RBP10□□□□□ -0.81
ECM2YBR065C SPB4P25808 606 aaPredicted RBP9.99□□□□□ -0.81
ECM2YBR065C GUT1P32190 709 aa9.99□□□□□ -0.81
ECM2YBR065C REF2P42073 533 aaPredicted RBP9.97□□□□□ -0.81
ECM2YBR065C ATH1P48016 1211 aa9.97□□□□□ -0.81
ECM2YBR065C GYP5Q12344 894 aa9.97□□□□□ -0.81
ECM2YBR065C DSF2P38213 736 aa9.95□□□□□ -0.82
ECM2YBR065C PBS2P08018 668 aa9.94□□□□□ -0.82
ECM2YBR065C YOL036WQ08206 761 aa9.94□□□□□ -0.82
ECM2YBR065C ABP1P15891 592 aaKnown RBP9.91□□□□□ -0.82
ECM2YBR065C DMA2P53924 522 aa9.9□□□□□ -0.82
ECM2YBR065C MSB4Q12317 492 aa9.9□□□□□ -0.82
ECM2YBR065C SET4P42948 560 aa9.89□□□□□ -0.83
ECM2YBR065C SOL3P38858 249 aa9.87□□□□□ -0.83
ECM2YBR065C YGR273CP53329 174 aa9.87□□□□□ -0.83
ECM2YBR065C RPN1P38764 993 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms