RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W MON2P48563 1636 aaPredicted RBP3.08□□□□□ -1.92
UTP20YBL004W KOG1P38873 1557 aa2.81□□□□□ -1.96
UTP20YBL004W INO80P53115 1489 aa2.8□□□□□ -1.96
UTP20YBL004W SPA2P23201 1466 aaKnown RBP2.72□□□□□ -1.97
UTP20YBL004W SWR1Q05471 1514 aa2.72□□□□□ -1.97
UTP20YBL004W DNA2P38859 1522 aa2.69□□□□□ -1.98
UTP20YBL004W RSE1Q04693 1361 aaKnown RBP2.66□□□□□ -1.98
UTP20YBL004W MIF2P35201 549 aa2.63□□□□□ -1.99
UTP20YBL004W TCB3Q03640 1545 aaKnown RBP2.6□□□□□ -1.99
UTP20YBL004W TY1B-DR4Q07793 1604 aa2.57□□□□□ -2
UTP20YBL004W THO2P53552 1597 aaKnown RBP2.54□□□□□ -2
UTP20YBL004W SSK2P53599 1579 aa2.5□□□□□ -2.01
UTP20YBL004W REV3P14284 1504 aa2.5□□□□□ -2.01
UTP20YBL004W PEP1P32319 1579 aa2.48□□□□□ -2.01
UTP20YBL004W MYO2P19524 1574 aaKnown RBP2.48□□□□□ -2.01
UTP20YBL004W IRC20Q06554 1556 aa2.48□□□□□ -2.01
UTP20YBL004W DNF1P32660 1571 aa2.47□□□□□ -2.01
UTP20YBL004W MDS3P53094 1487 aa2.47□□□□□ -2.01
UTP20YBL004W LTE1P07866 1435 aa2.45□□□□□ -2.02
UTP20YBL004W MET5P47169 1442 aa2.43□□□□□ -2.02
UTP20YBL004W BUD4P47136 1447 aa2.36□□□□□ -2.03
UTP20YBL004W ESC1Q03661 1658 aaKnown RBP2.36□□□□□ -2.03
UTP20YBL004W YFR006WP43590 535 aa2.32□□□□□ -2.04
UTP20YBL004W YCF1P39109 1515 aaKnown RBP2.32□□□□□ -2.04
UTP20YBL004W SPT6P23615 1451 aaKnown RBP2.31□□□□□ -2.04
UTP20YBL004W BPT1P14772 1559 aa2.31□□□□□ -2.04
UTP20YBL004W YOR093CQ12275 1648 aa2.3□□□□□ -2.04
UTP20YBL004W HSL1P34244 1518 aa2.29□□□□□ -2.04
UTP20YBL004W SGS1P35187 1447 aa2.29□□□□□ -2.04
UTP20YBL004W CDC25P04821 1589 aa2.29□□□□□ -2.04
UTP20YBL004W RPO31P04051 1460 aa2.29□□□□□ -2.04
UTP20YBL004W GEA2P39993 1459 aaKnown RBP2.29□□□□□ -2.04
UTP20YBL004W BNI1P41832 1953 aa2.28□□□□□ -2.04
UTP20YBL004W RPA190P10964 1664 aaKnown RBP2.28□□□□□ -2.04
UTP20YBL004W SIN3P22579 1536 aa2.28□□□□□ -2.05
UTP20YBL004W MTC1P47018 478 aaKnown RBP2.27□□□□□ -2.05
UTP20YBL004W HIR3P47171 1648 aa2.27□□□□□ -2.05
UTP20YBL004W ECM5Q03214 1411 aa2.26□□□□□ -2.05
UTP20YBL004W RKR1Q04781 1562 aa2.24□□□□□ -2.05
UTP20YBL004W HAP1P0CE41 1502 aa2.23□□□□□ -2.05
UTP20YBL004W PDR15Q04182 1529 aaKnown RBP2.23□□□□□ -2.05
UTP20YBL004W ATG2P53855 1592 aa2.21□□□□□ -2.06
UTP20YBL004W DNF2Q12675 1612 aa2.2□□□□□ -2.06
UTP20YBL004W TRM3Q07527 1436 aa2.2□□□□□ -2.06
UTP20YBL004W MMS1Q06211 1407 aa2.17□□□□□ -2.06
UTP20YBL004W NTE1Q04958 1679 aa2.17□□□□□ -2.06
UTP20YBL004W TAF2P23255 1407 aa2.16□□□□□ -2.06
UTP20YBL004W EDE1P34216 1381 aa2.15□□□□□ -2.06
UTP20YBL004W ESP1Q03018 1630 aa2.15□□□□□ -2.06
UTP20YBL004W TRM732Q03496 1420 aa2.14□□□□□ -2.07
UTP20YBL004W DRS2P39524 1355 aa2.13□□□□□ -2.07
UTP20YBL004W YPK9Q12697 1472 aa2.13□□□□□ -2.07
UTP20YBL004W VPS15P22219 1454 aa2.12□□□□□ -2.07
UTP20YBL004W CHD1P32657 1468 aa2.11□□□□□ -2.07
UTP20YBL004W PAN1P32521 1480 aa2.1□□□□□ -2.07
UTP20YBL004W SNT2P53127 1403 aa2.08□□□□□ -2.08
UTP20YBL004W DOP1Q03921 1698 aa2.07□□□□□ -2.08
UTP20YBL004W BUD3P25558 1636 aa2.07□□□□□ -2.08
UTP20YBL004W UFD4P33202 1483 aa2.06□□□□□ -2.08
UTP20YBL004W ABP1P15891 592 aaKnown RBP2.06□□□□□ -2.08
UTP20YBL004W TY1B-NL2Q99337 1749 aaKnown RBP2.06□□□□□ -2.08
UTP20YBL004W TOP2P06786 1428 aaKnown RBP2.05□□□□□ -2.08
UTP20YBL004W GDB1Q06625 1536 aa2.05□□□□□ -2.08
UTP20YBL004W SCC2Q04002 1493 aa2.05□□□□□ -2.08
UTP20YBL004W NUP170P38181 1502 aa2.04□□□□□ -2.08
UTP20YBL004W MMS22Q06164 1454 aa2.03□□□□□ -2.08
UTP20YBL004W SPO14P36126 1683 aa2.03□□□□□ -2.08
UTP20YBL004W PDR12Q02785 1511 aa2.03□□□□□ -2.08
UTP20YBL004W SSN2P38931 1420 aa2.03□□□□□ -2.08
UTP20YBL004W TY1B-BRQ12193 1756 aa2.02□□□□□ -2.09
UTP20YBL004W TY1B-GR3Q12316 1755 aa2.02□□□□□ -2.09
UTP20YBL004W TY1B-ORQ92393 1755 aa2.02□□□□□ -2.09
UTP20YBL004W DNF3Q12674 1656 aa2.02□□□□□ -2.09
UTP20YBL004W ITT1Q04638 464 aa2.01□□□□□ -2.09
UTP20YBL004W TY3B-GQ99315 1547 aa2□□□□□ -2.09
UTP20YBL004W XRN1P22147 1528 aaKnown RBP2□□□□□ -2.09
UTP20YBL004W NUP159P40477 1460 aa1.99□□□□□ -2.09
UTP20YBL004W IML1P47170 1584 aa1.99□□□□□ -2.09
UTP20YBL004W MYO4P32492 1471 aa1.99□□□□□ -2.09
UTP20YBL004W STU1P38198 1513 aa1.98□□□□□ -2.09
UTP20YBL004W RPO21P04050 1733 aaKnown RBP1.98□□□□□ -2.09
UTP20YBL004W GTT3P39996 337 aa1.98□□□□□ -2.09
UTP20YBL004W BCK1Q01389 1478 aa1.97□□□□□ -2.09
UTP20YBL004W YAH1Q12184 172 aaKnown RBP1.97□□□□□ -2.09
UTP20YBL004W YRF1-1P0CX20 1796 aa1.97□□□□□ -2.09
UTP20YBL004W YRF1-5P0CX21 1796 aa1.97□□□□□ -2.09
UTP20YBL004W YRF1-8P0CX22 1796 aa1.97□□□□□ -2.09
UTP20YBL004W TY1B-HO13535 1793 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-DR5P0C2I2 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-DR6P0C2I3 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-LR2P0C2I5 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-LR3P0C2I6 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W TY1B-PR1P0C2I9 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W TY1B-PR2P0C2J0 1756 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-PR3P0C2J1 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W TY1B-JR1P47098 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-ML2Q03434 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W TY1B-ER1Q03612 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-ML1Q04711 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W TY1B-GR2Q12269 1755 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms