RNA–Protein interactions for RNA: ENST00000641536.1

CCDC196-209, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,483 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-209ENST00000641536 AEBP2Q6ZN18 517 aaPredicted RBP18.89■□□□□ 0.61
CCDC196-209ENST00000641536 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
CCDC196-209ENST00000641536 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
CCDC196-209ENST00000641536 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
CCDC196-209ENST00000641536 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
CCDC196-209ENST00000641536 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
CCDC196-209ENST00000641536 ABCC9O60706 1549 aa15.77■□□□□ 0.11
CCDC196-209ENST00000641536 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
CCDC196-209ENST00000641536 FOXD1Q16676 465 aa15.35■□□□□ 0.05
CCDC196-209ENST00000641536 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
CCDC196-209ENST00000641536 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
CCDC196-209ENST00000641536 MSH5O43196 834 aa14.92□□□□□ -0.02
CCDC196-209ENST00000641536 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
CCDC196-209ENST00000641536 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
CCDC196-209ENST00000641536 NACADO15069 1562 aa14.79□□□□□ -0.04
CCDC196-209ENST00000641536 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
CCDC196-209ENST00000641536 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC196-209ENST00000641536 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
CCDC196-209ENST00000641536 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.09
CCDC196-209ENST00000641536 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
CCDC196-209ENST00000641536 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
CCDC196-209ENST00000641536 DCAF1Q9Y4B6 1507 aa14.37□□□□□ -0.11
CCDC196-209ENST00000641536 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
CCDC196-209ENST00000641536 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
CCDC196-209ENST00000641536 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
CCDC196-209ENST00000641536 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
CCDC196-209ENST00000641536 ADRA2BP18089 450 aa14.13□□□□□ -0.15
CCDC196-209ENST00000641536 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
CCDC196-209ENST00000641536 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
CCDC196-209ENST00000641536 SMARCA4P51532 1647 aa13.71□□□□□ -0.21
CCDC196-209ENST00000641536 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
CCDC196-209ENST00000641536 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
CCDC196-209ENST00000641536 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
CCDC196-209ENST00000641536 NESP48681 1621 aa13.58□□□□□ -0.23
CCDC196-209ENST00000641536 HMGXB3Q12766 1538 aa13.58□□□□□ -0.24
CCDC196-209ENST00000641536 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
CCDC196-209ENST00000641536 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
CCDC196-209ENST00000641536 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
CCDC196-209ENST00000641536 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
CCDC196-209ENST00000641536 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
CCDC196-209ENST00000641536 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
CCDC196-209ENST00000641536 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
CCDC196-209ENST00000641536 CUX2O14529 1486 aa13.46□□□□□ -0.25
CCDC196-209ENST00000641536 WIZO95785 1651 aa13.46□□□□□ -0.26
CCDC196-209ENST00000641536 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
CCDC196-209ENST00000641536 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
CCDC196-209ENST00000641536 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
CCDC196-209ENST00000641536 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
CCDC196-209ENST00000641536 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
CCDC196-209ENST00000641536 RSF1Q96T23 1441 aaPredicted RBP13.2□□□□□ -0.3
CCDC196-209ENST00000641536 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
CCDC196-209ENST00000641536 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
CCDC196-209ENST00000641536 WDR62O43379 1518 aa13.18□□□□□ -0.3
CCDC196-209ENST00000641536 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
CCDC196-209ENST00000641536 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
CCDC196-209ENST00000641536 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
CCDC196-209ENST00000641536 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
CCDC196-209ENST00000641536 CFTRP13569 1480 aa13.1□□□□□ -0.31
CCDC196-209ENST00000641536 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
CCDC196-209ENST00000641536 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
CCDC196-209ENST00000641536 KCNA4P22459 653 aa13.03□□□□□ -0.32
CCDC196-209ENST00000641536 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
CCDC196-209ENST00000641536 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
CCDC196-209ENST00000641536 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
CCDC196-209ENST00000641536 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
CCDC196-209ENST00000641536 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
CCDC196-209ENST00000641536 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
CCDC196-209ENST00000641536 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
CCDC196-209ENST00000641536 CHD1O14646 1710 aa12.85□□□□□ -0.35
CCDC196-209ENST00000641536 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
CCDC196-209ENST00000641536 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.36
CCDC196-209ENST00000641536 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.36
CCDC196-209ENST00000641536 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
CCDC196-209ENST00000641536 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.36
CCDC196-209ENST00000641536 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
CCDC196-209ENST00000641536 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
CCDC196-209ENST00000641536 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
CCDC196-209ENST00000641536 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC196-209ENST00000641536 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
CCDC196-209ENST00000641536 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
CCDC196-209ENST00000641536 POTEHQ6S545 545 aa12.77□□□□□ -0.37
CCDC196-209ENST00000641536 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
CCDC196-209ENST00000641536 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
CCDC196-209ENST00000641536 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
CCDC196-209ENST00000641536 CUX1P39880 1505 aa12.73□□□□□ -0.37
CCDC196-209ENST00000641536 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
CCDC196-209ENST00000641536 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
CCDC196-209ENST00000641536 SUPT5HO00267 1087 aaKnown RBP12.69□□□□□ -0.38
CCDC196-209ENST00000641536 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
CCDC196-209ENST00000641536 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CCDC196-209ENST00000641536 FBLN2P98095 1184 aa12.68□□□□□ -0.38
CCDC196-209ENST00000641536 PBRM1Q86U86 1689 aa12.68□□□□□ -0.38
CCDC196-209ENST00000641536 SOGA1O94964 1423 aa12.67□□□□□ -0.38
CCDC196-209ENST00000641536 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
CCDC196-209ENST00000641536 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
CCDC196-209ENST00000641536 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
CCDC196-209ENST00000641536 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
CCDC196-209ENST00000641536 CLASP1Q7Z460 1538 aa12.59□□□□□ -0.39
CCDC196-209ENST00000641536 ABCA5Q8WWZ7 1642 aa12.58□□□□□ -0.4
CCDC196-209ENST00000641536 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms