RNA–Protein interactions for RNA: ENST00000641271.1

AL662907.3-201, humanhuman

BASIC

Gene AL662907.3, Length 1,932 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662907.3-201ENST00000641271 NISCHQ9Y2I1 1504 aa19.8■□□□□ 0.76
AL662907.3-201ENST00000641271 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.74
AL662907.3-201ENST00000641271 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
AL662907.3-201ENST00000641271 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.39
AL662907.3-201ENST00000641271 ABCC9O60706 1549 aa17.13■□□□□ 0.33
AL662907.3-201ENST00000641271 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
AL662907.3-201ENST00000641271 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
AL662907.3-201ENST00000641271 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.23
AL662907.3-201ENST00000641271 DCAF8L2P0C7V8 631 aa16.51■□□□□ 0.23
AL662907.3-201ENST00000641271 NACADO15069 1562 aa16.45■□□□□ 0.22
AL662907.3-201ENST00000641271 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
AL662907.3-201ENST00000641271 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
AL662907.3-201ENST00000641271 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
AL662907.3-201ENST00000641271 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
AL662907.3-201ENST00000641271 MYT1Q01538 1121 aa16.2■□□□□ 0.18
AL662907.3-201ENST00000641271 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
AL662907.3-201ENST00000641271 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
AL662907.3-201ENST00000641271 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
AL662907.3-201ENST00000641271 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
AL662907.3-201ENST00000641271 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
AL662907.3-201ENST00000641271 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
AL662907.3-201ENST00000641271 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
AL662907.3-201ENST00000641271 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
AL662907.3-201ENST00000641271 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
AL662907.3-201ENST00000641271 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
AL662907.3-201ENST00000641271 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
AL662907.3-201ENST00000641271 FOXD1Q16676 465 aa15.41■□□□□ 0.06
AL662907.3-201ENST00000641271 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
AL662907.3-201ENST00000641271 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
AL662907.3-201ENST00000641271 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
AL662907.3-201ENST00000641271 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
AL662907.3-201ENST00000641271 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
AL662907.3-201ENST00000641271 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
AL662907.3-201ENST00000641271 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
AL662907.3-201ENST00000641271 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
AL662907.3-201ENST00000641271 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
AL662907.3-201ENST00000641271 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
AL662907.3-201ENST00000641271 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
AL662907.3-201ENST00000641271 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
AL662907.3-201ENST00000641271 WIZO95785 1651 aa15.14■□□□□ 0.01
AL662907.3-201ENST00000641271 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
AL662907.3-201ENST00000641271 APLP2Q06481 763 aa15.11■□□□□ 0.01
AL662907.3-201ENST00000641271 BAZ1BQ9UIG0 1483 aaKnown RBP15.1■□□□□ 0.01
AL662907.3-201ENST00000641271 ERICH6Q7L0X2 663 aa15.02□□□□□ -0.01
AL662907.3-201ENST00000641271 HRCP23327 699 aa15□□□□□ -0.01
AL662907.3-201ENST00000641271 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
AL662907.3-201ENST00000641271 ADRA2BP18089 450 aa14.98□□□□□ -0.01
AL662907.3-201ENST00000641271 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
AL662907.3-201ENST00000641271 NESP48681 1621 aa14.88□□□□□ -0.03
AL662907.3-201ENST00000641271 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
AL662907.3-201ENST00000641271 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
AL662907.3-201ENST00000641271 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
AL662907.3-201ENST00000641271 CFTRP13569 1480 aa14.71□□□□□ -0.05
AL662907.3-201ENST00000641271 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
AL662907.3-201ENST00000641271 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
AL662907.3-201ENST00000641271 DAXXQ9UER7 740 aaPredicted RBP14.68□□□□□ -0.06
AL662907.3-201ENST00000641271 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
AL662907.3-201ENST00000641271 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
AL662907.3-201ENST00000641271 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
AL662907.3-201ENST00000641271 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
AL662907.3-201ENST00000641271 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
AL662907.3-201ENST00000641271 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
AL662907.3-201ENST00000641271 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
AL662907.3-201ENST00000641271 BCL11AQ9H165 835 aa14.54□□□□□ -0.08
AL662907.3-201ENST00000641271 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
AL662907.3-201ENST00000641271 CUX2O14529 1486 aa14.51□□□□□ -0.09
AL662907.3-201ENST00000641271 WDR62O43379 1518 aa14.49□□□□□ -0.09
AL662907.3-201ENST00000641271 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
AL662907.3-201ENST00000641271 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
AL662907.3-201ENST00000641271 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.09
AL662907.3-201ENST00000641271 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
AL662907.3-201ENST00000641271 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
AL662907.3-201ENST00000641271 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
AL662907.3-201ENST00000641271 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
AL662907.3-201ENST00000641271 CUX1P39880 1505 aa14.34□□□□□ -0.11
AL662907.3-201ENST00000641271 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.11
AL662907.3-201ENST00000641271 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
AL662907.3-201ENST00000641271 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
AL662907.3-201ENST00000641271 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
AL662907.3-201ENST00000641271 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
AL662907.3-201ENST00000641271 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
AL662907.3-201ENST00000641271 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
AL662907.3-201ENST00000641271 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
AL662907.3-201ENST00000641271 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
AL662907.3-201ENST00000641271 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
AL662907.3-201ENST00000641271 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
AL662907.3-201ENST00000641271 SOGA1O94964 1423 aa14.21□□□□□ -0.14
AL662907.3-201ENST00000641271 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
AL662907.3-201ENST00000641271 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
AL662907.3-201ENST00000641271 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
AL662907.3-201ENST00000641271 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.14
AL662907.3-201ENST00000641271 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
AL662907.3-201ENST00000641271 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
AL662907.3-201ENST00000641271 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
AL662907.3-201ENST00000641271 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
AL662907.3-201ENST00000641271 MSH5O43196 834 aa14.07□□□□□ -0.16
AL662907.3-201ENST00000641271 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
AL662907.3-201ENST00000641271 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
AL662907.3-201ENST00000641271 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
AL662907.3-201ENST00000641271 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms