RNA–Protein interactions for RNA: ENST00000639777.1

GABRD-210, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 2,393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-210ENST00000639777 NISCHQ9Y2I1 1504 aa38.4■■■■□ 3.74
GABRD-210ENST00000639777 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
GABRD-210ENST00000639777 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
GABRD-210ENST00000639777 ABCC9O60706 1549 aa31.81■■■□□ 2.68
GABRD-210ENST00000639777 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
GABRD-210ENST00000639777 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
GABRD-210ENST00000639777 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
GABRD-210ENST00000639777 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
GABRD-210ENST00000639777 NACADO15069 1562 aa31.23■■■□□ 2.59
GABRD-210ENST00000639777 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
GABRD-210ENST00000639777 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
GABRD-210ENST00000639777 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
GABRD-210ENST00000639777 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
GABRD-210ENST00000639777 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
GABRD-210ENST00000639777 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
GABRD-210ENST00000639777 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
GABRD-210ENST00000639777 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
GABRD-210ENST00000639777 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
GABRD-210ENST00000639777 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
GABRD-210ENST00000639777 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
GABRD-210ENST00000639777 SMARCA4P51532 1647 aa29.51■■■□□ 2.32
GABRD-210ENST00000639777 WIZO95785 1651 aa29.39■■■□□ 2.3
GABRD-210ENST00000639777 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
GABRD-210ENST00000639777 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
GABRD-210ENST00000639777 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
GABRD-210ENST00000639777 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
GABRD-210ENST00000639777 HRCP23327 699 aa29.1■■■□□ 2.25
GABRD-210ENST00000639777 ATAD2BQ9ULI0 1458 aa29.09■■■□□ 2.25
GABRD-210ENST00000639777 PCGF6Q9BYE7 350 aa29.05■■■□□ 2.24
GABRD-210ENST00000639777 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
GABRD-210ENST00000639777 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
GABRD-210ENST00000639777 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
GABRD-210ENST00000639777 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
GABRD-210ENST00000639777 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
GABRD-210ENST00000639777 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
GABRD-210ENST00000639777 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
GABRD-210ENST00000639777 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
GABRD-210ENST00000639777 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
GABRD-210ENST00000639777 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
GABRD-210ENST00000639777 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
GABRD-210ENST00000639777 CFTRP13569 1480 aa28.19■■■□□ 2.1
GABRD-210ENST00000639777 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
GABRD-210ENST00000639777 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
GABRD-210ENST00000639777 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
GABRD-210ENST00000639777 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
GABRD-210ENST00000639777 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
GABRD-210ENST00000639777 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
GABRD-210ENST00000639777 NESP48681 1621 aa27.91■■■□□ 2.06
GABRD-210ENST00000639777 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
GABRD-210ENST00000639777 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
GABRD-210ENST00000639777 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
GABRD-210ENST00000639777 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
GABRD-210ENST00000639777 SOGA1O94964 1423 aa27.75■■■□□ 2.03
GABRD-210ENST00000639777 CUX1P39880 1505 aa27.75■■■□□ 2.03
GABRD-210ENST00000639777 EEA1Q15075 1411 aa27.72■■■□□ 2.03
GABRD-210ENST00000639777 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
GABRD-210ENST00000639777 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
GABRD-210ENST00000639777 CEP162Q5TB80 1403 aa27.65■■■□□ 2.02
GABRD-210ENST00000639777 TNIKQ9UKE5 1360 aa27.64■■■□□ 2.01
GABRD-210ENST00000639777 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
GABRD-210ENST00000639777 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
GABRD-210ENST00000639777 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
GABRD-210ENST00000639777 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
GABRD-210ENST00000639777 GOLGA3Q08378 1498 aa27.49■■□□□ 1.99
GABRD-210ENST00000639777 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
GABRD-210ENST00000639777 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
GABRD-210ENST00000639777 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
GABRD-210ENST00000639777 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
GABRD-210ENST00000639777 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
GABRD-210ENST00000639777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.98
GABRD-210ENST00000639777 CCER1Q8TC90 406 aaPredicted RBP27.36■■□□□ 1.97
GABRD-210ENST00000639777 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
GABRD-210ENST00000639777 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
GABRD-210ENST00000639777 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
GABRD-210ENST00000639777 KIF21BO75037 1637 aa27.32■■□□□ 1.96
GABRD-210ENST00000639777 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
GABRD-210ENST00000639777 CUX2O14529 1486 aa27.29■■□□□ 1.96
GABRD-210ENST00000639777 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
GABRD-210ENST00000639777 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
GABRD-210ENST00000639777 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
GABRD-210ENST00000639777 WDR62O43379 1518 aa27.16■■□□□ 1.94
GABRD-210ENST00000639777 CLIP1P30622 1438 aa27.15■■□□□ 1.94
GABRD-210ENST00000639777 PRXQ9BXM0 1461 aa27.12■■□□□ 1.93
GABRD-210ENST00000639777 IGF1RP08069 1367 aa27.12■■□□□ 1.93
GABRD-210ENST00000639777 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
GABRD-210ENST00000639777 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
GABRD-210ENST00000639777 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
GABRD-210ENST00000639777 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
GABRD-210ENST00000639777 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
GABRD-210ENST00000639777 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
GABRD-210ENST00000639777 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
GABRD-210ENST00000639777 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
GABRD-210ENST00000639777 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
GABRD-210ENST00000639777 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
GABRD-210ENST00000639777 GAPVD1Q14C86 1478 aa26.96■■□□□ 1.91
GABRD-210ENST00000639777 APLP2Q06481 763 aa26.89■■□□□ 1.9
GABRD-210ENST00000639777 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
GABRD-210ENST00000639777 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
GABRD-210ENST00000639777 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
GABRD-210ENST00000639777 CUL7Q14999 1698 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms