RNA–Protein interactions for RNA: ENST00000639369.1

GFAP-234, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-234ENST00000639369 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
GFAP-234ENST00000639369 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
GFAP-234ENST00000639369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
GFAP-234ENST00000639369 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
GFAP-234ENST00000639369 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
GFAP-234ENST00000639369 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
GFAP-234ENST00000639369 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
GFAP-234ENST00000639369 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
GFAP-234ENST00000639369 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
GFAP-234ENST00000639369 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
GFAP-234ENST00000639369 ABCC9O60706 1549 aa19.81■□□□□ 0.76
GFAP-234ENST00000639369 NACADO15069 1562 aa19.7■□□□□ 0.74
GFAP-234ENST00000639369 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
GFAP-234ENST00000639369 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
GFAP-234ENST00000639369 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
GFAP-234ENST00000639369 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
GFAP-234ENST00000639369 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
GFAP-234ENST00000639369 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
GFAP-234ENST00000639369 WIZO95785 1651 aa18.94■□□□□ 0.62
GFAP-234ENST00000639369 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
GFAP-234ENST00000639369 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
GFAP-234ENST00000639369 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
GFAP-234ENST00000639369 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
GFAP-234ENST00000639369 HRCP23327 699 aa18.81■□□□□ 0.6
GFAP-234ENST00000639369 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
GFAP-234ENST00000639369 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
GFAP-234ENST00000639369 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
GFAP-234ENST00000639369 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
GFAP-234ENST00000639369 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
GFAP-234ENST00000639369 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
GFAP-234ENST00000639369 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
GFAP-234ENST00000639369 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
GFAP-234ENST00000639369 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
GFAP-234ENST00000639369 EEA1Q15075 1411 aa18.51■□□□□ 0.55
GFAP-234ENST00000639369 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
GFAP-234ENST00000639369 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
GFAP-234ENST00000639369 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
GFAP-234ENST00000639369 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
GFAP-234ENST00000639369 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
GFAP-234ENST00000639369 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
GFAP-234ENST00000639369 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
GFAP-234ENST00000639369 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
GFAP-234ENST00000639369 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
GFAP-234ENST00000639369 KIF21BO75037 1637 aa18.2■□□□□ 0.5
GFAP-234ENST00000639369 GOLGA3Q08378 1498 aa18.19■□□□□ 0.5
GFAP-234ENST00000639369 SOGA1O94964 1423 aa18.15■□□□□ 0.5
GFAP-234ENST00000639369 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
GFAP-234ENST00000639369 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
GFAP-234ENST00000639369 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
GFAP-234ENST00000639369 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
GFAP-234ENST00000639369 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
GFAP-234ENST00000639369 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
GFAP-234ENST00000639369 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
GFAP-234ENST00000639369 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
GFAP-234ENST00000639369 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
GFAP-234ENST00000639369 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
GFAP-234ENST00000639369 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
GFAP-234ENST00000639369 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
GFAP-234ENST00000639369 CFTRP13569 1480 aa17.9■□□□□ 0.46
GFAP-234ENST00000639369 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
GFAP-234ENST00000639369 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
GFAP-234ENST00000639369 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
GFAP-234ENST00000639369 CLIP1P30622 1438 aa17.85■□□□□ 0.45
GFAP-234ENST00000639369 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
GFAP-234ENST00000639369 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
GFAP-234ENST00000639369 CUX1P39880 1505 aa17.81■□□□□ 0.44
GFAP-234ENST00000639369 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
GFAP-234ENST00000639369 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
GFAP-234ENST00000639369 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
GFAP-234ENST00000639369 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
GFAP-234ENST00000639369 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
GFAP-234ENST00000639369 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
GFAP-234ENST00000639369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
GFAP-234ENST00000639369 APLP2Q06481 763 aa17.57■□□□□ 0.4
GFAP-234ENST00000639369 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
GFAP-234ENST00000639369 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
GFAP-234ENST00000639369 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
GFAP-234ENST00000639369 CUX2O14529 1486 aa17.49■□□□□ 0.39
GFAP-234ENST00000639369 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
GFAP-234ENST00000639369 ARHGAP35Q9NRY4 1499 aa17.47■□□□□ 0.39
GFAP-234ENST00000639369 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
GFAP-234ENST00000639369 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
GFAP-234ENST00000639369 IGF1RP08069 1367 aa17.45■□□□□ 0.38
GFAP-234ENST00000639369 CUL7Q14999 1698 aa17.44■□□□□ 0.38
GFAP-234ENST00000639369 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
GFAP-234ENST00000639369 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
GFAP-234ENST00000639369 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
GFAP-234ENST00000639369 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
GFAP-234ENST00000639369 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
GFAP-234ENST00000639369 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
GFAP-234ENST00000639369 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
GFAP-234ENST00000639369 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
GFAP-234ENST00000639369 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
GFAP-234ENST00000639369 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
GFAP-234ENST00000639369 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
GFAP-234ENST00000639369 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
GFAP-234ENST00000639369 CTTNBP2Q8WZ74 1663 aa17.3■□□□□ 0.36
GFAP-234ENST00000639369 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
GFAP-234ENST00000639369 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
GFAP-234ENST00000639369 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms