RNA–Protein interactions for RNA: ENST00000639109.1

PAX6-253, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-253ENST00000639109 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
PAX6-253ENST00000639109 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
PAX6-253ENST00000639109 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
PAX6-253ENST00000639109 DCAF8L2P0C7V8 631 aa19.74■□□□□ 0.75
PAX6-253ENST00000639109 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
PAX6-253ENST00000639109 ABCC9O60706 1549 aa19.27■□□□□ 0.68
PAX6-253ENST00000639109 DCAF1Q9Y4B6 1507 aa19.13■□□□□ 0.65
PAX6-253ENST00000639109 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
PAX6-253ENST00000639109 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
PAX6-253ENST00000639109 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
PAX6-253ENST00000639109 NACADO15069 1562 aa18.72■□□□□ 0.59
PAX6-253ENST00000639109 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
PAX6-253ENST00000639109 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
PAX6-253ENST00000639109 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
PAX6-253ENST00000639109 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
PAX6-253ENST00000639109 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
PAX6-253ENST00000639109 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
PAX6-253ENST00000639109 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
PAX6-253ENST00000639109 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
PAX6-253ENST00000639109 WIZO95785 1651 aa18.13■□□□□ 0.49
PAX6-253ENST00000639109 HRCP23327 699 aa18.01■□□□□ 0.47
PAX6-253ENST00000639109 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
PAX6-253ENST00000639109 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PAX6-253ENST00000639109 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
PAX6-253ENST00000639109 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
PAX6-253ENST00000639109 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
PAX6-253ENST00000639109 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PAX6-253ENST00000639109 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
PAX6-253ENST00000639109 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
PAX6-253ENST00000639109 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
PAX6-253ENST00000639109 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
PAX6-253ENST00000639109 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
PAX6-253ENST00000639109 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
PAX6-253ENST00000639109 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
PAX6-253ENST00000639109 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
PAX6-253ENST00000639109 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
PAX6-253ENST00000639109 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
PAX6-253ENST00000639109 PPARGC1BQ86YN6 1023 aaKnown RBP17.43■□□□□ 0.38
PAX6-253ENST00000639109 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
PAX6-253ENST00000639109 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
PAX6-253ENST00000639109 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
PAX6-253ENST00000639109 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
PAX6-253ENST00000639109 SOGA1O94964 1423 aa17.29■□□□□ 0.36
PAX6-253ENST00000639109 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.35
PAX6-253ENST00000639109 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
PAX6-253ENST00000639109 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
PAX6-253ENST00000639109 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
PAX6-253ENST00000639109 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
PAX6-253ENST00000639109 CFTRP13569 1480 aa17.1■□□□□ 0.33
PAX6-253ENST00000639109 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
PAX6-253ENST00000639109 EEA1Q15075 1411 aa17.03■□□□□ 0.32
PAX6-253ENST00000639109 NESP48681 1621 aa17.03■□□□□ 0.32
PAX6-253ENST00000639109 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
PAX6-253ENST00000639109 CUX1P39880 1505 aa17.02■□□□□ 0.31
PAX6-253ENST00000639109 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PAX6-253ENST00000639109 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
PAX6-253ENST00000639109 TNIKQ9UKE5 1360 aa16.95■□□□□ 0.3
PAX6-253ENST00000639109 RANGAP1P46060 587 aaPredicted RBP16.93■□□□□ 0.3
PAX6-253ENST00000639109 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
PAX6-253ENST00000639109 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
PAX6-253ENST00000639109 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
PAX6-253ENST00000639109 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
PAX6-253ENST00000639109 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
PAX6-253ENST00000639109 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
PAX6-253ENST00000639109 MYT1Q01538 1121 aa16.84■□□□□ 0.29
PAX6-253ENST00000639109 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
PAX6-253ENST00000639109 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PAX6-253ENST00000639109 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
PAX6-253ENST00000639109 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
PAX6-253ENST00000639109 CUX2O14529 1486 aa16.75■□□□□ 0.27
PAX6-253ENST00000639109 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
PAX6-253ENST00000639109 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PAX6-253ENST00000639109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
PAX6-253ENST00000639109 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
PAX6-253ENST00000639109 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
PAX6-253ENST00000639109 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
PAX6-253ENST00000639109 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
PAX6-253ENST00000639109 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
PAX6-253ENST00000639109 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
PAX6-253ENST00000639109 CLIP1P30622 1438 aa16.67■□□□□ 0.26
PAX6-253ENST00000639109 IGF1RP08069 1367 aa16.67■□□□□ 0.26
PAX6-253ENST00000639109 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
PAX6-253ENST00000639109 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
PAX6-253ENST00000639109 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
PAX6-253ENST00000639109 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
PAX6-253ENST00000639109 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
PAX6-253ENST00000639109 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
PAX6-253ENST00000639109 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
PAX6-253ENST00000639109 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
PAX6-253ENST00000639109 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
PAX6-253ENST00000639109 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
PAX6-253ENST00000639109 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
PAX6-253ENST00000639109 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
PAX6-253ENST00000639109 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
PAX6-253ENST00000639109 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
PAX6-253ENST00000639109 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
PAX6-253ENST00000639109 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
PAX6-253ENST00000639109 KANK4Q5T7N3 995 aaPredicted RBP16.41■□□□□ 0.22
PAX6-253ENST00000639109 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
PAX6-253ENST00000639109 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms