RNA–Protein interactions for RNA: ENST00000637722.1

ARID1B-228, Transcript of AT-rich interaction domain 1B, humanhuman

Gene ARID1B, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-228ENST00000637722 NISCHQ9Y2I1 1504 aa13.52□□□□□ -0.24
ARID1B-228ENST00000637722 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
ARID1B-228ENST00000637722 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
ARID1B-228ENST00000637722 SHROOM4Q9ULL8 1493 aa11.72□□□□□ -0.53
ARID1B-228ENST00000637722 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
ARID1B-228ENST00000637722 ABCC9O60706 1549 aa11.37□□□□□ -0.59
ARID1B-228ENST00000637722 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
ARID1B-228ENST00000637722 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
ARID1B-228ENST00000637722 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
ARID1B-228ENST00000637722 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
ARID1B-228ENST00000637722 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
ARID1B-228ENST00000637722 NACADO15069 1562 aa10.93□□□□□ -0.66
ARID1B-228ENST00000637722 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
ARID1B-228ENST00000637722 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
ARID1B-228ENST00000637722 FAM9AQ8IZU1 332 aaPredicted RBP10.74□□□□□ -0.69
ARID1B-228ENST00000637722 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
ARID1B-228ENST00000637722 CHIC1Q5VXU3 224 aa10.71□□□□□ -0.69
ARID1B-228ENST00000637722 UNC13AQ9UPW8 1703 aa10.62□□□□□ -0.71
ARID1B-228ENST00000637722 RSF1Q96T23 1441 aaPredicted RBP10.61□□□□□ -0.71
ARID1B-228ENST00000637722 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
ARID1B-228ENST00000637722 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
ARID1B-228ENST00000637722 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
ARID1B-228ENST00000637722 MROH2BQ7Z745 1585 aa10.45□□□□□ -0.74
ARID1B-228ENST00000637722 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
ARID1B-228ENST00000637722 APLP2Q06481 763 aa10.42□□□□□ -0.74
ARID1B-228ENST00000637722 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.75
ARID1B-228ENST00000637722 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
ARID1B-228ENST00000637722 BAZ1BQ9UIG0 1483 aaKnown RBP10.38□□□□□ -0.75
ARID1B-228ENST00000637722 WIZO95785 1651 aa10.32□□□□□ -0.76
ARID1B-228ENST00000637722 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
ARID1B-228ENST00000637722 SMARCA4P51532 1647 aa10.31□□□□□ -0.76
ARID1B-228ENST00000637722 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
ARID1B-228ENST00000637722 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
ARID1B-228ENST00000637722 TTBK1Q5TCY1 1321 aaPredicted RBP10.29□□□□□ -0.76
ARID1B-228ENST00000637722 TOP2AP11388 1531 aaKnown RBP10.26□□□□□ -0.77
ARID1B-228ENST00000637722 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
ARID1B-228ENST00000637722 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
ARID1B-228ENST00000637722 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
ARID1B-228ENST00000637722 BICRAQ9NZM4 1560 aa10.22□□□□□ -0.77
ARID1B-228ENST00000637722 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
ARID1B-228ENST00000637722 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
ARID1B-228ENST00000637722 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.78
ARID1B-228ENST00000637722 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
ARID1B-228ENST00000637722 NCAPD3P42695 1498 aa10.11□□□□□ -0.79
ARID1B-228ENST00000637722 EEA1Q15075 1411 aa10.1□□□□□ -0.79
ARID1B-228ENST00000637722 ABCC8Q09428 1581 aa10.08□□□□□ -0.8
ARID1B-228ENST00000637722 PRDM2Q13029 1718 aa10.06□□□□□ -0.8
ARID1B-228ENST00000637722 CADPSQ9ULU8 1353 aa10.06□□□□□ -0.8
ARID1B-228ENST00000637722 CCER1Q8TC90 406 aaPredicted RBP10.02□□□□□ -0.81
ARID1B-228ENST00000637722 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
ARID1B-228ENST00000637722 FBLN2P98095 1184 aa10.01□□□□□ -0.81
ARID1B-228ENST00000637722 SOGA1O94964 1423 aa10.01□□□□□ -0.81
ARID1B-228ENST00000637722 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
ARID1B-228ENST00000637722 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
ARID1B-228ENST00000637722 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
ARID1B-228ENST00000637722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
ARID1B-228ENST00000637722 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
ARID1B-228ENST00000637722 GOLGA3Q08378 1498 aa9.99□□□□□ -0.81
ARID1B-228ENST00000637722 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
ARID1B-228ENST00000637722 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
ARID1B-228ENST00000637722 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.82
ARID1B-228ENST00000637722 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
ARID1B-228ENST00000637722 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
ARID1B-228ENST00000637722 CUX2O14529 1486 aa9.93□□□□□ -0.82
ARID1B-228ENST00000637722 CLIP1P30622 1438 aa9.93□□□□□ -0.82
ARID1B-228ENST00000637722 ITGAEP38570 1179 aa9.93□□□□□ -0.82
ARID1B-228ENST00000637722 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
ARID1B-228ENST00000637722 CEP162Q5TB80 1403 aa9.92□□□□□ -0.82
ARID1B-228ENST00000637722 CFTRP13569 1480 aa9.91□□□□□ -0.82
ARID1B-228ENST00000637722 HRCP23327 699 aa9.88□□□□□ -0.83
ARID1B-228ENST00000637722 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
ARID1B-228ENST00000637722 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
ARID1B-228ENST00000637722 RUSC2Q8N2Y8 1516 aa9.85□□□□□ -0.83
ARID1B-228ENST00000637722 FAM50AQ14320 339 aaKnown RBP9.84□□□□□ -0.83
ARID1B-228ENST00000637722 TDRD9Q8NDG6 1382 aaKnown RBP9.83□□□□□ -0.84
ARID1B-228ENST00000637722 NESP48681 1621 aa9.82□□□□□ -0.84
ARID1B-228ENST00000637722 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
ARID1B-228ENST00000637722 ARID3CA6NKF2 412 aa9.8□□□□□ -0.84
ARID1B-228ENST00000637722 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
ARID1B-228ENST00000637722 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
ARID1B-228ENST00000637722 CDK11AQ9UQ88 783 aaPredicted RBP9.77□□□□□ -0.84
ARID1B-228ENST00000637722 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.85
ARID1B-228ENST00000637722 TOP2BQ02880 1626 aa9.76□□□□□ -0.85
ARID1B-228ENST00000637722 CUX1P39880 1505 aa9.75□□□□□ -0.85
ARID1B-228ENST00000637722 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
ARID1B-228ENST00000637722 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
ARID1B-228ENST00000637722 IGF1RP08069 1367 aa9.74□□□□□ -0.85
ARID1B-228ENST00000637722 LAMC3Q9Y6N6 1575 aa9.73□□□□□ -0.85
ARID1B-228ENST00000637722 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.85
ARID1B-228ENST00000637722 TOPBP1Q92547 1522 aa9.71□□□□□ -0.85
ARID1B-228ENST00000637722 MTUS2Q5JR59 1369 aa9.71□□□□□ -0.86
ARID1B-228ENST00000637722 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.86
ARID1B-228ENST00000637722 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
ARID1B-228ENST00000637722 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
ARID1B-228ENST00000637722 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
ARID1B-228ENST00000637722 POLA1P09884 1462 aaPredicted RBP9.68□□□□□ -0.86
ARID1B-228ENST00000637722 MRC2Q9UBG0 1479 aa9.67□□□□□ -0.86
ARID1B-228ENST00000637722 KIF21BO75037 1637 aa9.65□□□□□ -0.86
ARID1B-228ENST00000637722 TRIM52Q96A61 297 aa9.65□□□□□ -0.86
ARID1B-228ENST00000637722 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms