RNA–Protein interactions for RNA: ENST00000637020.1

CNTNAP2-217, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,873 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-217ENST00000637020 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
CNTNAP2-217ENST00000637020 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
CNTNAP2-217ENST00000637020 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
CNTNAP2-217ENST00000637020 ABCC9O60706 1549 aa17.15■□□□□ 0.34
CNTNAP2-217ENST00000637020 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
CNTNAP2-217ENST00000637020 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
CNTNAP2-217ENST00000637020 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
CNTNAP2-217ENST00000637020 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
CNTNAP2-217ENST00000637020 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.21
CNTNAP2-217ENST00000637020 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
CNTNAP2-217ENST00000637020 NACADO15069 1562 aa16.33■□□□□ 0.2
CNTNAP2-217ENST00000637020 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
CNTNAP2-217ENST00000637020 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
CNTNAP2-217ENST00000637020 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
CNTNAP2-217ENST00000637020 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
CNTNAP2-217ENST00000637020 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
CNTNAP2-217ENST00000637020 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
CNTNAP2-217ENST00000637020 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
CNTNAP2-217ENST00000637020 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
CNTNAP2-217ENST00000637020 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
CNTNAP2-217ENST00000637020 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
CNTNAP2-217ENST00000637020 WIZO95785 1651 aa15.69■□□□□ 0.1
CNTNAP2-217ENST00000637020 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
CNTNAP2-217ENST00000637020 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
CNTNAP2-217ENST00000637020 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
CNTNAP2-217ENST00000637020 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
CNTNAP2-217ENST00000637020 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
CNTNAP2-217ENST00000637020 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
CNTNAP2-217ENST00000637020 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
CNTNAP2-217ENST00000637020 HRCP23327 699 aa15.48■□□□□ 0.07
CNTNAP2-217ENST00000637020 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
CNTNAP2-217ENST00000637020 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
CNTNAP2-217ENST00000637020 MYT1Q01538 1121 aa15.41■□□□□ 0.06
CNTNAP2-217ENST00000637020 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
CNTNAP2-217ENST00000637020 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
CNTNAP2-217ENST00000637020 TRIM26Q12899 539 aaPredicted RBP15.37■□□□□ 0.05
CNTNAP2-217ENST00000637020 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
CNTNAP2-217ENST00000637020 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
CNTNAP2-217ENST00000637020 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
CNTNAP2-217ENST00000637020 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
CNTNAP2-217ENST00000637020 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
CNTNAP2-217ENST00000637020 EEA1Q15075 1411 aa15.12■□□□□ 0.01
CNTNAP2-217ENST00000637020 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
CNTNAP2-217ENST00000637020 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
CNTNAP2-217ENST00000637020 SOGA1O94964 1423 aa15.07■□□□□ 0
CNTNAP2-217ENST00000637020 PPARGC1BQ86YN6 1023 aaKnown RBP15.07■□□□□ 0
CNTNAP2-217ENST00000637020 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
CNTNAP2-217ENST00000637020 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
CNTNAP2-217ENST00000637020 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
CNTNAP2-217ENST00000637020 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
CNTNAP2-217ENST00000637020 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
CNTNAP2-217ENST00000637020 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
CNTNAP2-217ENST00000637020 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
CNTNAP2-217ENST00000637020 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
CNTNAP2-217ENST00000637020 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
CNTNAP2-217ENST00000637020 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
CNTNAP2-217ENST00000637020 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
CNTNAP2-217ENST00000637020 NESP48681 1621 aa14.89□□□□□ -0.03
CNTNAP2-217ENST00000637020 KIF21BO75037 1637 aa14.89□□□□□ -0.03
CNTNAP2-217ENST00000637020 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
CNTNAP2-217ENST00000637020 BIVM-ERCC5R4GMW8 1640 aa14.83□□□□□ -0.04
CNTNAP2-217ENST00000637020 CFTRP13569 1480 aa14.76□□□□□ -0.05
CNTNAP2-217ENST00000637020 CLIP1P30622 1438 aa14.75□□□□□ -0.05
CNTNAP2-217ENST00000637020 RAPGEF2Q9Y4G8 1499 aa14.74□□□□□ -0.05
CNTNAP2-217ENST00000637020 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
CNTNAP2-217ENST00000637020 TTBK1Q5TCY1 1321 aaPredicted RBP14.73□□□□□ -0.05
CNTNAP2-217ENST00000637020 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
CNTNAP2-217ENST00000637020 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
CNTNAP2-217ENST00000637020 CUX1P39880 1505 aa14.71□□□□□ -0.05
CNTNAP2-217ENST00000637020 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
CNTNAP2-217ENST00000637020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
CNTNAP2-217ENST00000637020 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
CNTNAP2-217ENST00000637020 VPS8Q8N3P4 1428 aa14.69□□□□□ -0.06
CNTNAP2-217ENST00000637020 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
CNTNAP2-217ENST00000637020 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
CNTNAP2-217ENST00000637020 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
CNTNAP2-217ENST00000637020 APLP2Q06481 763 aa14.64□□□□□ -0.07
CNTNAP2-217ENST00000637020 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
CNTNAP2-217ENST00000637020 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
CNTNAP2-217ENST00000637020 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
CNTNAP2-217ENST00000637020 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
CNTNAP2-217ENST00000637020 CUX2O14529 1486 aa14.51□□□□□ -0.09
CNTNAP2-217ENST00000637020 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
CNTNAP2-217ENST00000637020 FGD5Q6ZNL6 1462 aa14.48□□□□□ -0.09
CNTNAP2-217ENST00000637020 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CNTNAP2-217ENST00000637020 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
CNTNAP2-217ENST00000637020 IGF1RP08069 1367 aa14.46□□□□□ -0.09
CNTNAP2-217ENST00000637020 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
CNTNAP2-217ENST00000637020 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
CNTNAP2-217ENST00000637020 ARHGAP35Q9NRY4 1499 aa14.42□□□□□ -0.1
CNTNAP2-217ENST00000637020 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
CNTNAP2-217ENST00000637020 DNMBPQ6XZF7 1577 aa14.41□□□□□ -0.1
CNTNAP2-217ENST00000637020 BCL11AQ9H165 835 aa14.37□□□□□ -0.11
CNTNAP2-217ENST00000637020 WDR62O43379 1518 aa14.37□□□□□ -0.11
CNTNAP2-217ENST00000637020 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
CNTNAP2-217ENST00000637020 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
CNTNAP2-217ENST00000637020 KANK4Q5T7N3 995 aaPredicted RBP14.36□□□□□ -0.11
CNTNAP2-217ENST00000637020 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
CNTNAP2-217ENST00000637020 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.11
CNTNAP2-217ENST00000637020 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms