RNA–Protein interactions for RNA: ENST00000636900.1

RBMS3-219, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 4,662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-219ENST00000636900 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
RBMS3-219ENST00000636900 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
RBMS3-219ENST00000636900 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
RBMS3-219ENST00000636900 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
RBMS3-219ENST00000636900 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
RBMS3-219ENST00000636900 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
RBMS3-219ENST00000636900 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
RBMS3-219ENST00000636900 NACADO15069 1562 aa11.75□□□□□ -0.53
RBMS3-219ENST00000636900 SUPT5HO00267 1087 aaKnown RBP11.74□□□□□ -0.53
RBMS3-219ENST00000636900 ABCC9O60706 1549 aa11.69□□□□□ -0.54
RBMS3-219ENST00000636900 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
RBMS3-219ENST00000636900 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
RBMS3-219ENST00000636900 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.61
RBMS3-219ENST00000636900 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
RBMS3-219ENST00000636900 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.62
RBMS3-219ENST00000636900 APLP2Q06481 763 aa11.11□□□□□ -0.63
RBMS3-219ENST00000636900 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
RBMS3-219ENST00000636900 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
RBMS3-219ENST00000636900 SMARCA2P51531 1590 aa11.05□□□□□ -0.64
RBMS3-219ENST00000636900 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
RBMS3-219ENST00000636900 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
RBMS3-219ENST00000636900 EEA1Q15075 1411 aa10.96□□□□□ -0.66
RBMS3-219ENST00000636900 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
RBMS3-219ENST00000636900 SMARCA4P51532 1647 aa10.88□□□□□ -0.67
RBMS3-219ENST00000636900 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
RBMS3-219ENST00000636900 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
RBMS3-219ENST00000636900 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
RBMS3-219ENST00000636900 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
RBMS3-219ENST00000636900 ATAD2BQ9ULI0 1458 aa10.75□□□□□ -0.69
RBMS3-219ENST00000636900 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
RBMS3-219ENST00000636900 NCAPD3P42695 1498 aa10.73□□□□□ -0.69
RBMS3-219ENST00000636900 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
RBMS3-219ENST00000636900 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
RBMS3-219ENST00000636900 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
RBMS3-219ENST00000636900 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
RBMS3-219ENST00000636900 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
RBMS3-219ENST00000636900 WIZO95785 1651 aa10.66□□□□□ -0.7
RBMS3-219ENST00000636900 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
RBMS3-219ENST00000636900 PDS5BQ9NTI5 1447 aa10.66□□□□□ -0.7
RBMS3-219ENST00000636900 EIF4G1Q04637 1599 aaKnown RBP10.64□□□□□ -0.71
RBMS3-219ENST00000636900 KIF27Q86VH2 1401 aa10.64□□□□□ -0.71
RBMS3-219ENST00000636900 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
RBMS3-219ENST00000636900 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
RBMS3-219ENST00000636900 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
RBMS3-219ENST00000636900 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
RBMS3-219ENST00000636900 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
RBMS3-219ENST00000636900 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
RBMS3-219ENST00000636900 TNIKQ9UKE5 1360 aa10.55□□□□□ -0.72
RBMS3-219ENST00000636900 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
RBMS3-219ENST00000636900 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.73
RBMS3-219ENST00000636900 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
RBMS3-219ENST00000636900 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
RBMS3-219ENST00000636900 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
RBMS3-219ENST00000636900 ERCC6Q03468 1493 aa10.46□□□□□ -0.73
RBMS3-219ENST00000636900 CFTRP13569 1480 aa10.46□□□□□ -0.73
RBMS3-219ENST00000636900 CCER1Q8TC90 406 aaPredicted RBP10.45□□□□□ -0.74
RBMS3-219ENST00000636900 CLIP1P30622 1438 aa10.44□□□□□ -0.74
RBMS3-219ENST00000636900 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
RBMS3-219ENST00000636900 FHAD1B1AJZ9 1412 aa10.42□□□□□ -0.74
RBMS3-219ENST00000636900 CC2D2AQ9P2K1 1620 aa10.42□□□□□ -0.74
RBMS3-219ENST00000636900 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
RBMS3-219ENST00000636900 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
RBMS3-219ENST00000636900 CUX2O14529 1486 aa10.39□□□□□ -0.75
RBMS3-219ENST00000636900 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
RBMS3-219ENST00000636900 SOGA1O94964 1423 aa10.37□□□□□ -0.75
RBMS3-219ENST00000636900 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
RBMS3-219ENST00000636900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
RBMS3-219ENST00000636900 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
RBMS3-219ENST00000636900 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
RBMS3-219ENST00000636900 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
RBMS3-219ENST00000636900 RAPGEF2Q9Y4G8 1499 aa10.34□□□□□ -0.75
RBMS3-219ENST00000636900 KIF21BO75037 1637 aa10.32□□□□□ -0.76
RBMS3-219ENST00000636900 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
RBMS3-219ENST00000636900 HRCP23327 699 aa10.31□□□□□ -0.76
RBMS3-219ENST00000636900 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
RBMS3-219ENST00000636900 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
RBMS3-219ENST00000636900 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
RBMS3-219ENST00000636900 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
RBMS3-219ENST00000636900 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
RBMS3-219ENST00000636900 VPS8Q8N3P4 1428 aa10.27□□□□□ -0.76
RBMS3-219ENST00000636900 IFT140Q96RY7 1462 aa10.26□□□□□ -0.77
RBMS3-219ENST00000636900 FBLN2P98095 1184 aa10.25□□□□□ -0.77
RBMS3-219ENST00000636900 FGD5Q6ZNL6 1462 aa10.25□□□□□ -0.77
RBMS3-219ENST00000636900 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
RBMS3-219ENST00000636900 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
RBMS3-219ENST00000636900 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
RBMS3-219ENST00000636900 AEBP2Q6ZN18 517 aaPredicted RBP10.22□□□□□ -0.77
RBMS3-219ENST00000636900 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
RBMS3-219ENST00000636900 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.78
RBMS3-219ENST00000636900 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.78
RBMS3-219ENST00000636900 EFCAB5A4FU69 1503 aa10.2□□□□□ -0.78
RBMS3-219ENST00000636900 GAPVD1Q14C86 1478 aa10.2□□□□□ -0.78
RBMS3-219ENST00000636900 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
RBMS3-219ENST00000636900 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
RBMS3-219ENST00000636900 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
RBMS3-219ENST00000636900 CUL7Q14999 1698 aa10.19□□□□□ -0.78
RBMS3-219ENST00000636900 GRIN2BQ13224 1484 aa10.19□□□□□ -0.78
RBMS3-219ENST00000636900 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
RBMS3-219ENST00000636900 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
RBMS3-219ENST00000636900 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms