RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 DNAJC5BQ9UF47 199 aa4.8□□□□□ -1.64
SYNGAP1-215ENST00000636443 ABCC9O60706 1549 aa4.8□□□□□ -1.64
SYNGAP1-215ENST00000636443 DNAJC5Q9H3Z4 198 aa4.76□□□□□ -1.65
SYNGAP1-215ENST00000636443 NISCHQ9Y2I1 1504 aa4.63□□□□□ -1.67
SYNGAP1-215ENST00000636443 TRIM41Q8WV44 630 aa4.49□□□□□ -1.69
SYNGAP1-215ENST00000636443 AEBP2Q6ZN18 517 aaPredicted RBP4.39□□□□□ -1.71
SYNGAP1-215ENST00000636443 PABPN1Q86U42 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
SYNGAP1-215ENST00000636443 RB1CC1Q8TDY2 1594 aa4.37□□□□□ -1.71
SYNGAP1-215ENST00000636443 CECR2Q9BXF3 1484 aa4.36□□□□□ -1.71
SYNGAP1-215ENST00000636443 CCDC180Q9P1Z9 1646 aa4.35□□□□□ -1.71
SYNGAP1-215ENST00000636443 CC2D2AQ9P2K1 1620 aa4.3□□□□□ -1.72
SYNGAP1-215ENST00000636443 CUX2O14529 1486 aa4.29□□□□□ -1.72
SYNGAP1-215ENST00000636443 UNC13AQ9UPW8 1703 aa4.27□□□□□ -1.73
SYNGAP1-215ENST00000636443 ERCC6Q03468 1493 aa4.23□□□□□ -1.73
SYNGAP1-215ENST00000636443 ILDR1Q86SU0 546 aaPredicted RBP4.22□□□□□ -1.73
SYNGAP1-215ENST00000636443 NACADO15069 1562 aa4.19□□□□□ -1.74
SYNGAP1-215ENST00000636443 BICRAQ9NZM4 1560 aa4.19□□□□□ -1.74
SYNGAP1-215ENST00000636443 DCAF8L2P0C7V8 631 aa4.19□□□□□ -1.74
SYNGAP1-215ENST00000636443 EIF4G1Q04637 1599 aaKnown RBP4.17□□□□□ -1.74
SYNGAP1-215ENST00000636443 TRHP20396 242 aaPredicted RBP4.16□□□□□ -1.74
SYNGAP1-215ENST00000636443 SHROOM4Q9ULL8 1493 aa4.09□□□□□ -1.75
SYNGAP1-215ENST00000636443 RIMBP3CA6NJZ7 1639 aa4.06□□□□□ -1.76
SYNGAP1-215ENST00000636443 RIMBP3BA6NNM3 1639 aa4.06□□□□□ -1.76
SYNGAP1-215ENST00000636443 RIMBP3Q9UFD9 1639 aa4.06□□□□□ -1.76
SYNGAP1-215ENST00000636443 BAZ1AQ9NRL2 1556 aaPredicted RBP4.06□□□□□ -1.76
SYNGAP1-215ENST00000636443 OSCARQ8IYS5 282 aa4.03□□□□□ -1.76
SYNGAP1-215ENST00000636443 SMARCA2P51531 1590 aa4.02□□□□□ -1.77
SYNGAP1-215ENST00000636443 THOC2Q8NI27 1593 aaKnown RBP4.02□□□□□ -1.77
SYNGAP1-215ENST00000636443 LMTK3Q96Q04 1460 aa4.01□□□□□ -1.77
SYNGAP1-215ENST00000636443 CYB5RLQ6IPT4 315 aa3.99□□□□□ -1.77
SYNGAP1-215ENST00000636443 SCRIBQ14160 1630 aa3.99□□□□□ -1.77
SYNGAP1-215ENST00000636443 NESP48681 1621 aa3.98□□□□□ -1.77
SYNGAP1-215ENST00000636443 ARHGEF11O15085 1522 aa3.97□□□□□ -1.77
SYNGAP1-215ENST00000636443 SOCS7O14512 581 aa3.96□□□□□ -1.78
SYNGAP1-215ENST00000636443 KIF21AQ7Z4S6 1674 aa3.95□□□□□ -1.78
SYNGAP1-215ENST00000636443 MYO15BQ96JP2 1530 aa3.92□□□□□ -1.78
SYNGAP1-215ENST00000636443 FBXO41Q8TF61 875 aa3.92□□□□□ -1.78
SYNGAP1-215ENST00000636443 ERCC6L2Q5T890 1561 aa3.91□□□□□ -1.78
SYNGAP1-215ENST00000636443 DISP3Q9P2K9 1392 aa3.9□□□□□ -1.78
SYNGAP1-215ENST00000636443 ILDR2Q71H61 639 aa3.89□□□□□ -1.79
SYNGAP1-215ENST00000636443 ARAP1Q96P48 1450 aa3.89□□□□□ -1.79
SYNGAP1-215ENST00000636443 LAMC3Q9Y6N6 1575 aa3.88□□□□□ -1.79
SYNGAP1-215ENST00000636443 PDS5BQ9NTI5 1447 aa3.87□□□□□ -1.79
SYNGAP1-215ENST00000636443 MRC2Q9UBG0 1479 aa3.87□□□□□ -1.79
SYNGAP1-215ENST00000636443 HECW2Q9P2P5 1572 aa3.86□□□□□ -1.79
SYNGAP1-215ENST00000636443 WDR62O43379 1518 aa3.85□□□□□ -1.79
SYNGAP1-215ENST00000636443 KDM4FA0A1W2PPD8 638 aa3.84□□□□□ -1.79
SYNGAP1-215ENST00000636443 NCAPD3P42695 1498 aa3.83□□□□□ -1.8
SYNGAP1-215ENST00000636443 SPATA31D1Q6ZQQ2 1576 aa3.82□□□□□ -1.8
SYNGAP1-215ENST00000636443 CHD1O14646 1710 aa3.81□□□□□ -1.8
SYNGAP1-215ENST00000636443 HMGXB3Q12766 1538 aa3.8□□□□□ -1.8
SYNGAP1-215ENST00000636443 SYNJ2O15056 1496 aa3.79□□□□□ -1.8
SYNGAP1-215ENST00000636443 FBLN2P98095 1184 aa3.79□□□□□ -1.8
SYNGAP1-215ENST00000636443 CEP164Q9UPV0 1460 aa3.79□□□□□ -1.8
SYNGAP1-215ENST00000636443 RSF1Q96T23 1441 aaPredicted RBP3.78□□□□□ -1.8
SYNGAP1-215ENST00000636443 BAZ1BQ9UIG0 1483 aaKnown RBP3.78□□□□□ -1.8
SYNGAP1-215ENST00000636443 ATAD2BQ9ULI0 1458 aa3.78□□□□□ -1.8
SYNGAP1-215ENST00000636443 KDM6BO15054 1643 aa3.77□□□□□ -1.81
SYNGAP1-215ENST00000636443 ADGRL1O94910 1474 aa3.76□□□□□ -1.81
SYNGAP1-215ENST00000636443 KIF13AQ9H1H9 1805 aa3.74□□□□□ -1.81
SYNGAP1-215ENST00000636443 ZNF608Q9ULD9 1512 aaPredicted RBP3.73□□□□□ -1.81
SYNGAP1-215ENST00000636443 SMARCA4P51532 1647 aa3.73□□□□□ -1.81
SYNGAP1-215ENST00000636443 EIF4G3O43432 1585 aaKnown RBP3.72□□□□□ -1.81
SYNGAP1-215ENST00000636443 DCAF1Q9Y4B6 1507 aa3.72□□□□□ -1.81
SYNGAP1-215ENST00000636443 CADPSQ9ULU8 1353 aa3.72□□□□□ -1.81
SYNGAP1-215ENST00000636443 FANCD2Q9BXW9 1451 aa3.72□□□□□ -1.81
SYNGAP1-215ENST00000636443 GAPVD1Q14C86 1478 aa3.71□□□□□ -1.82
SYNGAP1-215ENST00000636443 TSPOAP1O95153 1857 aa3.71□□□□□ -1.82
SYNGAP1-215ENST00000636443 ZCCHC6Q5VYS8 1495 aaKnown RBP3.7□□□□□ -1.82
SYNGAP1-215ENST00000636443 IFT140Q96RY7 1462 aa3.7□□□□□ -1.82
SYNGAP1-215ENST00000636443 SYNJ1O43426 1573 aa3.7□□□□□ -1.82
SYNGAP1-215ENST00000636443 URB2Q14146 1524 aaKnown RBP3.7□□□□□ -1.82
SYNGAP1-215ENST00000636443 FAM69CQ0P6D2 419 aa3.69□□□□□ -1.82
SYNGAP1-215ENST00000636443 CLASP1Q7Z460 1538 aa3.68□□□□□ -1.82
SYNGAP1-215ENST00000636443 CERKQ8TCT0 537 aa3.67□□□□□ -1.82
SYNGAP1-215ENST00000636443 TOP2BQ02880 1626 aa3.66□□□□□ -1.82
SYNGAP1-215ENST00000636443 CHMP7Q8WUX9 453 aaPredicted RBP3.65□□□□□ -1.83
SYNGAP1-215ENST00000636443 AQRO60306 1485 aaKnown RBP eCLIP3.65□□□□□ -1.83
SYNGAP1-215ENST00000636443 DIP2BQ9P265 1576 aa3.63□□□□□ -1.83
SYNGAP1-215ENST00000636443 ABCC10Q5T3U5 1492 aa3.63□□□□□ -1.83
SYNGAP1-215ENST00000636443 NPM1P06748 294 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNGAP1-215ENST00000636443 SNAPC4Q5SXM2 1469 aa3.62□□□□□ -1.83
SYNGAP1-215ENST00000636443 PHF23Q9BUL5 403 aaPredicted RBP3.62□□□□□ -1.83
SYNGAP1-215ENST00000636443 PEG3Q9GZU2 1588 aa3.61□□□□□ -1.83
SYNGAP1-215ENST00000636443 PCF11O94913 1555 aaKnown RBP3.6□□□□□ -1.83
SYNGAP1-215ENST00000636443 TOPBP1Q92547 1522 aa3.59□□□□□ -1.84
SYNGAP1-215ENST00000636443 PRDM2Q13029 1718 aa3.58□□□□□ -1.84
SYNGAP1-215ENST00000636443 MAPKBP1O60336 1514 aa3.58□□□□□ -1.84
SYNGAP1-215ENST00000636443 TARBP1Q13395 1621 aaKnown RBP3.58□□□□□ -1.84
SYNGAP1-215ENST00000636443 CFTRP13569 1480 aa3.57□□□□□ -1.84
SYNGAP1-215ENST00000636443 MED1Q15648 1581 aaPredicted RBP3.57□□□□□ -1.84
SYNGAP1-215ENST00000636443 PLPPR3Q6T4P5 718 aa3.57□□□□□ -1.84
SYNGAP1-215ENST00000636443 MROH2BQ7Z745 1585 aa3.57□□□□□ -1.84
SYNGAP1-215ENST00000636443 MAGI1Q96QZ7 1491 aaPredicted RBP3.57□□□□□ -1.84
SYNGAP1-215ENST00000636443 KIF21BO75037 1637 aa3.56□□□□□ -1.84
SYNGAP1-215ENST00000636443 CEP170Q5SW79 1584 aa3.56□□□□□ -1.84
SYNGAP1-215ENST00000636443 TDRD9Q8NDG6 1382 aaKnown RBP3.56□□□□□ -1.84
SYNGAP1-215ENST00000636443 HSPA2P54652 639 aa3.56□□□□□ -1.84
SYNGAP1-215ENST00000636443 PTPRMP28827 1452 aa3.55□□□□□ -1.84
SYNGAP1-215ENST00000636443 ABCC8Q09428 1581 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms