RNA–Protein interactions for RNA: ENST00000635519.1

NRXN1-242, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-242ENST00000635519 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
NRXN1-242ENST00000635519 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
NRXN1-242ENST00000635519 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
NRXN1-242ENST00000635519 MYO15BQ96JP2 1530 aa10.4□□□□□ -0.74
NRXN1-242ENST00000635519 MYT1Q01538 1121 aa10.25□□□□□ -0.77
NRXN1-242ENST00000635519 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
NRXN1-242ENST00000635519 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
NRXN1-242ENST00000635519 NACADO15069 1562 aa10.14□□□□□ -0.79
NRXN1-242ENST00000635519 RB1CC1Q8TDY2 1594 aa10.05□□□□□ -0.8
NRXN1-242ENST00000635519 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
NRXN1-242ENST00000635519 ABCC9O60706 1549 aa9.98□□□□□ -0.81
NRXN1-242ENST00000635519 UNC13AQ9UPW8 1703 aa9.95□□□□□ -0.82
NRXN1-242ENST00000635519 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
NRXN1-242ENST00000635519 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
NRXN1-242ENST00000635519 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
NRXN1-242ENST00000635519 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
NRXN1-242ENST00000635519 APLP2Q06481 763 aa9.71□□□□□ -0.85
NRXN1-242ENST00000635519 BCL11AQ9H165 835 aa9.63□□□□□ -0.87
NRXN1-242ENST00000635519 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
NRXN1-242ENST00000635519 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
NRXN1-242ENST00000635519 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
NRXN1-242ENST00000635519 HRCP23327 699 aa9.53□□□□□ -0.88
NRXN1-242ENST00000635519 DNAJC5BQ9UF47 199 aa9.48□□□□□ -0.89
NRXN1-242ENST00000635519 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.9
NRXN1-242ENST00000635519 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
NRXN1-242ENST00000635519 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
NRXN1-242ENST00000635519 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
NRXN1-242ENST00000635519 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
NRXN1-242ENST00000635519 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
NRXN1-242ENST00000635519 CC2D2AQ9P2K1 1620 aa9.31□□□□□ -0.92
NRXN1-242ENST00000635519 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
NRXN1-242ENST00000635519 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
NRXN1-242ENST00000635519 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
NRXN1-242ENST00000635519 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
NRXN1-242ENST00000635519 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
NRXN1-242ENST00000635519 SMARCA4P51532 1647 aa9.19□□□□□ -0.94
NRXN1-242ENST00000635519 BAZ1AQ9NRL2 1556 aaPredicted RBP9.15□□□□□ -0.94
NRXN1-242ENST00000635519 EIF5BO60841 1220 aaKnown RBP9.14□□□□□ -0.95
NRXN1-242ENST00000635519 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
NRXN1-242ENST00000635519 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
NRXN1-242ENST00000635519 CUX2O14529 1486 aa9.09□□□□□ -0.95
NRXN1-242ENST00000635519 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
NRXN1-242ENST00000635519 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
NRXN1-242ENST00000635519 WDR97A6NE52 1622 aa9.02□□□□□ -0.96
NRXN1-242ENST00000635519 ATAD2BQ9ULI0 1458 aa9.01□□□□□ -0.97
NRXN1-242ENST00000635519 THOC2Q8NI27 1593 aaKnown RBP9.01□□□□□ -0.97
NRXN1-242ENST00000635519 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
NRXN1-242ENST00000635519 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
NRXN1-242ENST00000635519 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
NRXN1-242ENST00000635519 NEUROD1Q13562 356 aa8.97□□□□□ -0.97
NRXN1-242ENST00000635519 CSRNP3Q8WYN3 585 aa8.97□□□□□ -0.97
NRXN1-242ENST00000635519 ANO8Q9HCE9 1232 aaPredicted RBP8.97□□□□□ -0.97
NRXN1-242ENST00000635519 PCGF6Q9BYE7 350 aa8.91□□□□□ -0.98
NRXN1-242ENST00000635519 WDR62O43379 1518 aa8.91□□□□□ -0.98
NRXN1-242ENST00000635519 UBE2Q2Q8WVN8 375 aa8.91□□□□□ -0.98
NRXN1-242ENST00000635519 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.98
NRXN1-242ENST00000635519 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
NRXN1-242ENST00000635519 PODXL2Q9NZ53 605 aa8.83□□□□□ -1
NRXN1-242ENST00000635519 BAZ1BQ9UIG0 1483 aaKnown RBP8.82□□□□□ -1
NRXN1-242ENST00000635519 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
NRXN1-242ENST00000635519 CFTRP13569 1480 aa8.78□□□□□ -1
NRXN1-242ENST00000635519 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
NRXN1-242ENST00000635519 WIZO95785 1651 aa8.74□□□□□ -1.01
NRXN1-242ENST00000635519 MRC2Q9UBG0 1479 aa8.73□□□□□ -1.01
NRXN1-242ENST00000635519 PKNOX2Q96KN3 472 aa8.73□□□□□ -1.01
NRXN1-242ENST00000635519 CCDC136Q96JN2 1154 aa8.72□□□□□ -1.01
NRXN1-242ENST00000635519 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
NRXN1-242ENST00000635519 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.01
NRXN1-242ENST00000635519 AEBP2Q6ZN18 517 aaPredicted RBP8.69□□□□□ -1.02
NRXN1-242ENST00000635519 CADPSQ9ULU8 1353 aa8.67□□□□□ -1.02
NRXN1-242ENST00000635519 DNAJC5Q9H3Z4 198 aa8.67□□□□□ -1.02
NRXN1-242ENST00000635519 RSF1Q96T23 1441 aaPredicted RBP8.65□□□□□ -1.02
NRXN1-242ENST00000635519 DNMBPQ6XZF7 1577 aa8.65□□□□□ -1.02
NRXN1-242ENST00000635519 KLHL34Q8N239 644 aa8.64□□□□□ -1.03
NRXN1-242ENST00000635519 TARBP1Q13395 1621 aaKnown RBP8.63□□□□□ -1.03
NRXN1-242ENST00000635519 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
NRXN1-242ENST00000635519 ZEB1P37275 1124 aaPredicted RBP8.61□□□□□ -1.03
NRXN1-242ENST00000635519 NESP48681 1621 aa8.6□□□□□ -1.03
NRXN1-242ENST00000635519 CEP164Q9UPV0 1460 aa8.59□□□□□ -1.03
NRXN1-242ENST00000635519 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
NRXN1-242ENST00000635519 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
NRXN1-242ENST00000635519 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
NRXN1-242ENST00000635519 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
NRXN1-242ENST00000635519 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
NRXN1-242ENST00000635519 URB2Q14146 1524 aaKnown RBP8.53□□□□□ -1.04
NRXN1-242ENST00000635519 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
NRXN1-242ENST00000635519 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
NRXN1-242ENST00000635519 PBRM1Q86U86 1689 aa8.51□□□□□ -1.05
NRXN1-242ENST00000635519 CCDC88BA6NC98 1476 aa8.5□□□□□ -1.05
NRXN1-242ENST00000635519 SHROOM2Q13796 1616 aa8.5□□□□□ -1.05
NRXN1-242ENST00000635519 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
NRXN1-242ENST00000635519 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
NRXN1-242ENST00000635519 TOPBP1Q92547 1522 aa8.48□□□□□ -1.05
NRXN1-242ENST00000635519 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
NRXN1-242ENST00000635519 PDE4CQ08493 712 aa8.48□□□□□ -1.05
NRXN1-242ENST00000635519 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
NRXN1-242ENST00000635519 PLPPR3Q6T4P5 718 aa8.45□□□□□ -1.06
NRXN1-242ENST00000635519 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
NRXN1-242ENST00000635519 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
NRXN1-242ENST00000635519 CHD1O14646 1710 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms