RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
SPTAN1-218ENST00000629137 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
SPTAN1-218ENST00000629137 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.17
SPTAN1-218ENST00000629137 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
SPTAN1-218ENST00000629137 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
SPTAN1-218ENST00000629137 FOXD1Q16676 465 aa20.59■□□□□ 0.89
SPTAN1-218ENST00000629137 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
SPTAN1-218ENST00000629137 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
SPTAN1-218ENST00000629137 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
SPTAN1-218ENST00000629137 ADRA2BP18089 450 aa19.46■□□□□ 0.71
SPTAN1-218ENST00000629137 ABCC9O60706 1549 aa19.4■□□□□ 0.7
SPTAN1-218ENST00000629137 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
SPTAN1-218ENST00000629137 MSH5O43196 834 aa19.08■□□□□ 0.64
SPTAN1-218ENST00000629137 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
SPTAN1-218ENST00000629137 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
SPTAN1-218ENST00000629137 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
SPTAN1-218ENST00000629137 NACADO15069 1562 aa18.63■□□□□ 0.57
SPTAN1-218ENST00000629137 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
SPTAN1-218ENST00000629137 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
SPTAN1-218ENST00000629137 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
SPTAN1-218ENST00000629137 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
SPTAN1-218ENST00000629137 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
SPTAN1-218ENST00000629137 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPTAN1-218ENST00000629137 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
SPTAN1-218ENST00000629137 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
SPTAN1-218ENST00000629137 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
SPTAN1-218ENST00000629137 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
SPTAN1-218ENST00000629137 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
SPTAN1-218ENST00000629137 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
SPTAN1-218ENST00000629137 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
SPTAN1-218ENST00000629137 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
SPTAN1-218ENST00000629137 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
SPTAN1-218ENST00000629137 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
SPTAN1-218ENST00000629137 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
SPTAN1-218ENST00000629137 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
SPTAN1-218ENST00000629137 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
SPTAN1-218ENST00000629137 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
SPTAN1-218ENST00000629137 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
SPTAN1-218ENST00000629137 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
SPTAN1-218ENST00000629137 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
SPTAN1-218ENST00000629137 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
SPTAN1-218ENST00000629137 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
SPTAN1-218ENST00000629137 WIZO95785 1651 aa17.12■□□□□ 0.33
SPTAN1-218ENST00000629137 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
SPTAN1-218ENST00000629137 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
SPTAN1-218ENST00000629137 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
SPTAN1-218ENST00000629137 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SPTAN1-218ENST00000629137 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
SPTAN1-218ENST00000629137 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
SPTAN1-218ENST00000629137 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
SPTAN1-218ENST00000629137 NESP48681 1621 aa16.83■□□□□ 0.28
SPTAN1-218ENST00000629137 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SPTAN1-218ENST00000629137 KCNA4P22459 653 aa16.77■□□□□ 0.28
SPTAN1-218ENST00000629137 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
SPTAN1-218ENST00000629137 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
SPTAN1-218ENST00000629137 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
SPTAN1-218ENST00000629137 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
SPTAN1-218ENST00000629137 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
SPTAN1-218ENST00000629137 CFTRP13569 1480 aa16.63■□□□□ 0.25
SPTAN1-218ENST00000629137 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
SPTAN1-218ENST00000629137 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
SPTAN1-218ENST00000629137 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
SPTAN1-218ENST00000629137 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
SPTAN1-218ENST00000629137 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
SPTAN1-218ENST00000629137 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
SPTAN1-218ENST00000629137 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
SPTAN1-218ENST00000629137 CUX2O14529 1486 aa16.45■□□□□ 0.22
SPTAN1-218ENST00000629137 WDR62O43379 1518 aa16.41■□□□□ 0.22
SPTAN1-218ENST00000629137 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-218ENST00000629137 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
SPTAN1-218ENST00000629137 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
SPTAN1-218ENST00000629137 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
SPTAN1-218ENST00000629137 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
SPTAN1-218ENST00000629137 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
SPTAN1-218ENST00000629137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.196e-8■□□□□ 9.6
SPTAN1-218ENST00000629137 CUX1P39880 1505 aa16.21■□□□□ 0.19
SPTAN1-218ENST00000629137 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-218ENST00000629137 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
SPTAN1-218ENST00000629137 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
SPTAN1-218ENST00000629137 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
SPTAN1-218ENST00000629137 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-218ENST00000629137 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
SPTAN1-218ENST00000629137 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
SPTAN1-218ENST00000629137 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
SPTAN1-218ENST00000629137 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-218ENST00000629137 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
SPTAN1-218ENST00000629137 SOGA1O94964 1423 aa16.07■□□□□ 0.16
SPTAN1-218ENST00000629137 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
SPTAN1-218ENST00000629137 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
SPTAN1-218ENST00000629137 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
SPTAN1-218ENST00000629137 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
SPTAN1-218ENST00000629137 SLC4A2P04920 1241 aa16■□□□□ 0.15
SPTAN1-218ENST00000629137 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
SPTAN1-218ENST00000629137 ABCA10Q8WWZ4 1543 aa15.95■□□□□ 0.14
SPTAN1-218ENST00000629137 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
SPTAN1-218ENST00000629137 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
SPTAN1-218ENST00000629137 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
SPTAN1-218ENST00000629137 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
SPTAN1-218ENST00000629137 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
SPTAN1-218ENST00000629137 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms