RNA–Protein interactions for RNA: ENST00000624693.1

C11orf49-223, Transcript of chromosome 11 open reading frame 49, humanhuman

Gene C11orf49, Length 2,141 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-223ENST00000624693 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
C11orf49-223ENST00000624693 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
C11orf49-223ENST00000624693 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
C11orf49-223ENST00000624693 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
C11orf49-223ENST00000624693 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
C11orf49-223ENST00000624693 ABCC9O60706 1549 aa22.38■■□□□ 1.17
C11orf49-223ENST00000624693 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
C11orf49-223ENST00000624693 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
C11orf49-223ENST00000624693 NACADO15069 1562 aa22.06■■□□□ 1.12
C11orf49-223ENST00000624693 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
C11orf49-223ENST00000624693 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
C11orf49-223ENST00000624693 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
C11orf49-223ENST00000624693 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
C11orf49-223ENST00000624693 HRCP23327 699 aa21.33■■□□□ 1.01
C11orf49-223ENST00000624693 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
C11orf49-223ENST00000624693 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
C11orf49-223ENST00000624693 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
C11orf49-223ENST00000624693 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
C11orf49-223ENST00000624693 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
C11orf49-223ENST00000624693 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
C11orf49-223ENST00000624693 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
C11orf49-223ENST00000624693 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
C11orf49-223ENST00000624693 WIZO95785 1651 aa20.82■□□□□ 0.92
C11orf49-223ENST00000624693 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
C11orf49-223ENST00000624693 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
C11orf49-223ENST00000624693 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
C11orf49-223ENST00000624693 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
C11orf49-223ENST00000624693 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
C11orf49-223ENST00000624693 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
C11orf49-223ENST00000624693 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
C11orf49-223ENST00000624693 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
C11orf49-223ENST00000624693 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
C11orf49-223ENST00000624693 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.86
C11orf49-223ENST00000624693 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
C11orf49-223ENST00000624693 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.84
C11orf49-223ENST00000624693 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
C11orf49-223ENST00000624693 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
C11orf49-223ENST00000624693 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
C11orf49-223ENST00000624693 MYT1Q01538 1121 aa20.19■□□□□ 0.82
C11orf49-223ENST00000624693 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
C11orf49-223ENST00000624693 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
C11orf49-223ENST00000624693 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
C11orf49-223ENST00000624693 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
C11orf49-223ENST00000624693 CFTRP13569 1480 aa19.9■□□□□ 0.78
C11orf49-223ENST00000624693 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
C11orf49-223ENST00000624693 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
C11orf49-223ENST00000624693 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
C11orf49-223ENST00000624693 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
C11orf49-223ENST00000624693 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
C11orf49-223ENST00000624693 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
C11orf49-223ENST00000624693 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
C11orf49-223ENST00000624693 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
C11orf49-223ENST00000624693 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
C11orf49-223ENST00000624693 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
C11orf49-223ENST00000624693 NESP48681 1621 aa19.64■□□□□ 0.73
C11orf49-223ENST00000624693 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
C11orf49-223ENST00000624693 CUX1P39880 1505 aa19.61■□□□□ 0.73
C11orf49-223ENST00000624693 SOGA1O94964 1423 aa19.6■□□□□ 0.73
C11orf49-223ENST00000624693 EEA1Q15075 1411 aa19.58■□□□□ 0.73
C11orf49-223ENST00000624693 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
C11orf49-223ENST00000624693 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
C11orf49-223ENST00000624693 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
C11orf49-223ENST00000624693 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
C11orf49-223ENST00000624693 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
C11orf49-223ENST00000624693 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
C11orf49-223ENST00000624693 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
C11orf49-223ENST00000624693 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
C11orf49-223ENST00000624693 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
C11orf49-223ENST00000624693 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
C11orf49-223ENST00000624693 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
C11orf49-223ENST00000624693 GTF3C3Q9Y5Q9 886 aa19.39■□□□□ 0.69
C11orf49-223ENST00000624693 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
C11orf49-223ENST00000624693 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
C11orf49-223ENST00000624693 KIF21BO75037 1637 aa19.32■□□□□ 0.68
C11orf49-223ENST00000624693 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
C11orf49-223ENST00000624693 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
C11orf49-223ENST00000624693 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
C11orf49-223ENST00000624693 CUX2O14529 1486 aa19.29■□□□□ 0.68
C11orf49-223ENST00000624693 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.67
C11orf49-223ENST00000624693 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
C11orf49-223ENST00000624693 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
C11orf49-223ENST00000624693 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
C11orf49-223ENST00000624693 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
C11orf49-223ENST00000624693 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
C11orf49-223ENST00000624693 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
C11orf49-223ENST00000624693 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
C11orf49-223ENST00000624693 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
C11orf49-223ENST00000624693 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
C11orf49-223ENST00000624693 IGF1RP08069 1367 aa19.17■□□□□ 0.66
C11orf49-223ENST00000624693 WDR97A6NE52 1622 aa19.16■□□□□ 0.66
C11orf49-223ENST00000624693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.16■□□□□ 0.66
C11orf49-223ENST00000624693 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
C11orf49-223ENST00000624693 WDR62O43379 1518 aa19.14■□□□□ 0.65
C11orf49-223ENST00000624693 TARBP1Q13395 1621 aaKnown RBP19.1■□□□□ 0.65
C11orf49-223ENST00000624693 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.65
C11orf49-223ENST00000624693 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
C11orf49-223ENST00000624693 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
C11orf49-223ENST00000624693 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
C11orf49-223ENST00000624693 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
C11orf49-223ENST00000624693 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms