RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
SOX9-AS1-217ENST00000623935 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
SOX9-AS1-217ENST00000623935 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
SOX9-AS1-217ENST00000623935 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
SOX9-AS1-217ENST00000623935 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
SOX9-AS1-217ENST00000623935 ABCC9O60706 1549 aa16.58■□□□□ 0.25
SOX9-AS1-217ENST00000623935 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
SOX9-AS1-217ENST00000623935 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
SOX9-AS1-217ENST00000623935 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
SOX9-AS1-217ENST00000623935 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
SOX9-AS1-217ENST00000623935 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
SOX9-AS1-217ENST00000623935 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
SOX9-AS1-217ENST00000623935 NACADO15069 1562 aa16.23■□□□□ 0.19
SOX9-AS1-217ENST00000623935 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
SOX9-AS1-217ENST00000623935 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
SOX9-AS1-217ENST00000623935 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
SOX9-AS1-217ENST00000623935 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
SOX9-AS1-217ENST00000623935 FOXD1Q16676 465 aa15.65■□□□□ 0.1
SOX9-AS1-217ENST00000623935 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
SOX9-AS1-217ENST00000623935 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
SOX9-AS1-217ENST00000623935 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
SOX9-AS1-217ENST00000623935 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
SOX9-AS1-217ENST00000623935 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
SOX9-AS1-217ENST00000623935 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
SOX9-AS1-217ENST00000623935 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
SOX9-AS1-217ENST00000623935 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-217ENST00000623935 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
SOX9-AS1-217ENST00000623935 WIZO95785 1651 aa15.06■□□□□ 0
SOX9-AS1-217ENST00000623935 SMARCA2P51531 1590 aa15.06■□□□□ 0
SOX9-AS1-217ENST00000623935 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
SOX9-AS1-217ENST00000623935 ATAD2BQ9ULI0 1458 aa15.02□□□□□ -0.01
SOX9-AS1-217ENST00000623935 MSH5O43196 834 aa15.02□□□□□ -0.01
SOX9-AS1-217ENST00000623935 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
SOX9-AS1-217ENST00000623935 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
SOX9-AS1-217ENST00000623935 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
SOX9-AS1-217ENST00000623935 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
SOX9-AS1-217ENST00000623935 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
SOX9-AS1-217ENST00000623935 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
SOX9-AS1-217ENST00000623935 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
SOX9-AS1-217ENST00000623935 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
SOX9-AS1-217ENST00000623935 CFTRP13569 1480 aa14.54□□□□□ -0.08
SOX9-AS1-217ENST00000623935 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.09
SOX9-AS1-217ENST00000623935 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
SOX9-AS1-217ENST00000623935 NESP48681 1621 aa14.44□□□□□ -0.1
SOX9-AS1-217ENST00000623935 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
SOX9-AS1-217ENST00000623935 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
SOX9-AS1-217ENST00000623935 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
SOX9-AS1-217ENST00000623935 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
SOX9-AS1-217ENST00000623935 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
SOX9-AS1-217ENST00000623935 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
SOX9-AS1-217ENST00000623935 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
SOX9-AS1-217ENST00000623935 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
SOX9-AS1-217ENST00000623935 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
SOX9-AS1-217ENST00000623935 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
SOX9-AS1-217ENST00000623935 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
SOX9-AS1-217ENST00000623935 CUX1P39880 1505 aa14.23□□□□□ -0.13
SOX9-AS1-217ENST00000623935 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
SOX9-AS1-217ENST00000623935 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
SOX9-AS1-217ENST00000623935 MRC2Q9UBG0 1479 aa14.22□□□□□ -0.13
SOX9-AS1-217ENST00000623935 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
SOX9-AS1-217ENST00000623935 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
SOX9-AS1-217ENST00000623935 WDR62O43379 1518 aa14.14□□□□□ -0.15
SOX9-AS1-217ENST00000623935 FGD5Q6ZNL6 1462 aa14.14□□□□□ -0.15
SOX9-AS1-217ENST00000623935 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
SOX9-AS1-217ENST00000623935 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
SOX9-AS1-217ENST00000623935 SOGA1O94964 1423 aa14.08□□□□□ -0.16
SOX9-AS1-217ENST00000623935 EEA1Q15075 1411 aa14.05□□□□□ -0.16
SOX9-AS1-217ENST00000623935 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
SOX9-AS1-217ENST00000623935 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
SOX9-AS1-217ENST00000623935 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
SOX9-AS1-217ENST00000623935 IFT140Q96RY7 1462 aa14.02□□□□□ -0.16
SOX9-AS1-217ENST00000623935 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.17
SOX9-AS1-217ENST00000623935 CUX2O14529 1486 aa14.01□□□□□ -0.17
SOX9-AS1-217ENST00000623935 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
SOX9-AS1-217ENST00000623935 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
SOX9-AS1-217ENST00000623935 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
SOX9-AS1-217ENST00000623935 RUSC2Q8N2Y8 1516 aa13.96□□□□□ -0.18
SOX9-AS1-217ENST00000623935 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
SOX9-AS1-217ENST00000623935 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
SOX9-AS1-217ENST00000623935 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
SOX9-AS1-217ENST00000623935 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
SOX9-AS1-217ENST00000623935 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
SOX9-AS1-217ENST00000623935 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
SOX9-AS1-217ENST00000623935 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
SOX9-AS1-217ENST00000623935 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
SOX9-AS1-217ENST00000623935 IGF1RP08069 1367 aa13.86□□□□□ -0.19
SOX9-AS1-217ENST00000623935 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
SOX9-AS1-217ENST00000623935 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
SOX9-AS1-217ENST00000623935 CUL7Q14999 1698 aa13.84□□□□□ -0.19
SOX9-AS1-217ENST00000623935 KIF21BO75037 1637 aa13.83□□□□□ -0.2
SOX9-AS1-217ENST00000623935 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
SOX9-AS1-217ENST00000623935 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
SOX9-AS1-217ENST00000623935 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
SOX9-AS1-217ENST00000623935 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
SOX9-AS1-217ENST00000623935 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
SOX9-AS1-217ENST00000623935 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
SOX9-AS1-217ENST00000623935 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
SOX9-AS1-217ENST00000623935 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
SOX9-AS1-217ENST00000623935 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
SOX9-AS1-217ENST00000623935 ADRA2BP18089 450 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms