RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
TMCO3-210ENST00000620021 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
TMCO3-210ENST00000620021 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
TMCO3-210ENST00000620021 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
TMCO3-210ENST00000620021 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
TMCO3-210ENST00000620021 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
TMCO3-210ENST00000620021 ABCC9O60706 1549 aa23.26■■□□□ 1.31
TMCO3-210ENST00000620021 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
TMCO3-210ENST00000620021 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
TMCO3-210ENST00000620021 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
TMCO3-210ENST00000620021 NACADO15069 1562 aa22.62■■□□□ 1.21
TMCO3-210ENST00000620021 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
TMCO3-210ENST00000620021 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
TMCO3-210ENST00000620021 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
TMCO3-210ENST00000620021 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
TMCO3-210ENST00000620021 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
TMCO3-210ENST00000620021 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
TMCO3-210ENST00000620021 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
TMCO3-210ENST00000620021 WIZO95785 1651 aa21.94■■□□□ 1.1
TMCO3-210ENST00000620021 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
TMCO3-210ENST00000620021 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
TMCO3-210ENST00000620021 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
TMCO3-210ENST00000620021 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
TMCO3-210ENST00000620021 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
TMCO3-210ENST00000620021 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
TMCO3-210ENST00000620021 EHMT2Q96KQ7 1210 aa21.56■■□□□ 1.04
TMCO3-210ENST00000620021 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
TMCO3-210ENST00000620021 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
TMCO3-210ENST00000620021 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
TMCO3-210ENST00000620021 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
TMCO3-210ENST00000620021 ABCC8Q09428 1581 aa21.29■■□□□ 1
TMCO3-210ENST00000620021 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
TMCO3-210ENST00000620021 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
TMCO3-210ENST00000620021 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
TMCO3-210ENST00000620021 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
TMCO3-210ENST00000620021 SOGA1O94964 1423 aa21■□□□□ 0.95
TMCO3-210ENST00000620021 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
TMCO3-210ENST00000620021 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
TMCO3-210ENST00000620021 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
TMCO3-210ENST00000620021 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
TMCO3-210ENST00000620021 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
TMCO3-210ENST00000620021 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
TMCO3-210ENST00000620021 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
TMCO3-210ENST00000620021 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
TMCO3-210ENST00000620021 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
TMCO3-210ENST00000620021 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
TMCO3-210ENST00000620021 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
TMCO3-210ENST00000620021 CFTRP13569 1480 aa20.67■□□□□ 0.9
TMCO3-210ENST00000620021 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
TMCO3-210ENST00000620021 TRIM26Q12899 539 aaPredicted RBP20.67■□□□□ 0.9
TMCO3-210ENST00000620021 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
TMCO3-210ENST00000620021 EEA1Q15075 1411 aa20.6■□□□□ 0.89
TMCO3-210ENST00000620021 CUX1P39880 1505 aa20.58■□□□□ 0.89
TMCO3-210ENST00000620021 TOP2BQ02880 1626 aa20.58■□□□□ 0.88
TMCO3-210ENST00000620021 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
TMCO3-210ENST00000620021 NESP48681 1621 aa20.54■□□□□ 0.88
TMCO3-210ENST00000620021 TNIKQ9UKE5 1360 aa20.53■□□□□ 0.88
TMCO3-210ENST00000620021 HRCP23327 699 aa20.52■□□□□ 0.87
TMCO3-210ENST00000620021 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
TMCO3-210ENST00000620021 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
TMCO3-210ENST00000620021 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
TMCO3-210ENST00000620021 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
TMCO3-210ENST00000620021 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
TMCO3-210ENST00000620021 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
TMCO3-210ENST00000620021 KIF21BO75037 1637 aa20.34■□□□□ 0.85
TMCO3-210ENST00000620021 CUX2O14529 1486 aa20.33■□□□□ 0.84
TMCO3-210ENST00000620021 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.84
TMCO3-210ENST00000620021 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
TMCO3-210ENST00000620021 CLIP1P30622 1438 aa20.32■□□□□ 0.84
TMCO3-210ENST00000620021 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.83
TMCO3-210ENST00000620021 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
TMCO3-210ENST00000620021 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
TMCO3-210ENST00000620021 IGF1RP08069 1367 aa20.22■□□□□ 0.83
TMCO3-210ENST00000620021 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
TMCO3-210ENST00000620021 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
TMCO3-210ENST00000620021 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
TMCO3-210ENST00000620021 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.82
TMCO3-210ENST00000620021 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
TMCO3-210ENST00000620021 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
TMCO3-210ENST00000620021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
TMCO3-210ENST00000620021 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
TMCO3-210ENST00000620021 APLP2Q06481 763 aa20.12■□□□□ 0.81
TMCO3-210ENST00000620021 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
TMCO3-210ENST00000620021 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
TMCO3-210ENST00000620021 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
TMCO3-210ENST00000620021 P3H3Q8IVL6 736 aa20.08■□□□□ 0.8
TMCO3-210ENST00000620021 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
TMCO3-210ENST00000620021 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
TMCO3-210ENST00000620021 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
TMCO3-210ENST00000620021 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
TMCO3-210ENST00000620021 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
TMCO3-210ENST00000620021 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
TMCO3-210ENST00000620021 ARHGAP35Q9NRY4 1499 aa19.97■□□□□ 0.79
TMCO3-210ENST00000620021 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
TMCO3-210ENST00000620021 MYT1Q01538 1121 aa19.95■□□□□ 0.78
TMCO3-210ENST00000620021 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
TMCO3-210ENST00000620021 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.77
TMCO3-210ENST00000620021 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
TMCO3-210ENST00000620021 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
TMCO3-210ENST00000620021 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms