RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
SYNRG-224ENST00000618829 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
SYNRG-224ENST00000618829 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
SYNRG-224ENST00000618829 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
SYNRG-224ENST00000618829 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
SYNRG-224ENST00000618829 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
SYNRG-224ENST00000618829 NACADO15069 1562 aa13.05□□□□□ -0.32
SYNRG-224ENST00000618829 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
SYNRG-224ENST00000618829 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.34
SYNRG-224ENST00000618829 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
SYNRG-224ENST00000618829 ABCC9O60706 1549 aa12.81□□□□□ -0.36
SYNRG-224ENST00000618829 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.37
SYNRG-224ENST00000618829 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
SYNRG-224ENST00000618829 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
SYNRG-224ENST00000618829 CHIC1Q5VXU3 224 aa12.4□□□□□ -0.42
SYNRG-224ENST00000618829 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
SYNRG-224ENST00000618829 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SYNRG-224ENST00000618829 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
SYNRG-224ENST00000618829 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
SYNRG-224ENST00000618829 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
SYNRG-224ENST00000618829 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
SYNRG-224ENST00000618829 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
SYNRG-224ENST00000618829 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
SYNRG-224ENST00000618829 WIZO95785 1651 aa12.08□□□□□ -0.48
SYNRG-224ENST00000618829 WDR97A6NE52 1622 aa12.06□□□□□ -0.48
SYNRG-224ENST00000618829 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
SYNRG-224ENST00000618829 BIVM-ERCC5R4GMW8 1640 aa11.99□□□□□ -0.49
SYNRG-224ENST00000618829 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
SYNRG-224ENST00000618829 AEBP2Q6ZN18 517 aaPredicted RBP11.92□□□□□ -0.5
SYNRG-224ENST00000618829 CECR2Q9BXF3 1484 aa11.88□□□□□ -0.51
SYNRG-224ENST00000618829 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
SYNRG-224ENST00000618829 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
SYNRG-224ENST00000618829 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.53
SYNRG-224ENST00000618829 TOP2BQ02880 1626 aa11.65□□□□□ -0.55
SYNRG-224ENST00000618829 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.55
SYNRG-224ENST00000618829 THOC2Q8NI27 1593 aaKnown RBP11.64□□□□□ -0.55
SYNRG-224ENST00000618829 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
SYNRG-224ENST00000618829 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
SYNRG-224ENST00000618829 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
SYNRG-224ENST00000618829 HRCP23327 699 aa11.57□□□□□ -0.56
SYNRG-224ENST00000618829 ABCA5Q8WWZ7 1642 aa11.55□□□□□ -0.56
SYNRG-224ENST00000618829 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
SYNRG-224ENST00000618829 CFTRP13569 1480 aa11.54□□□□□ -0.56
SYNRG-224ENST00000618829 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
SYNRG-224ENST00000618829 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
SYNRG-224ENST00000618829 WDR62O43379 1518 aa11.45□□□□□ -0.58
SYNRG-224ENST00000618829 KIF21BO75037 1637 aa11.43□□□□□ -0.58
SYNRG-224ENST00000618829 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
SYNRG-224ENST00000618829 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
SYNRG-224ENST00000618829 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
SYNRG-224ENST00000618829 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
SYNRG-224ENST00000618829 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
SYNRG-224ENST00000618829 CUX1P39880 1505 aa11.37□□□□□ -0.59
SYNRG-224ENST00000618829 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
SYNRG-224ENST00000618829 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
SYNRG-224ENST00000618829 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
SYNRG-224ENST00000618829 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
SYNRG-224ENST00000618829 BAZ1BQ9UIG0 1483 aaKnown RBP11.33□□□□□ -0.6
SYNRG-224ENST00000618829 CUL7Q14999 1698 aa11.28□□□□□ -0.6
SYNRG-224ENST00000618829 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
SYNRG-224ENST00000618829 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
SYNRG-224ENST00000618829 SAMD9Q5K651 1589 aa11.23□□□□□ -0.61
SYNRG-224ENST00000618829 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
SYNRG-224ENST00000618829 PHF23Q9BUL5 403 aaPredicted RBP11.18□□□□□ -0.62
SYNRG-224ENST00000618829 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
SYNRG-224ENST00000618829 ABCA10Q8WWZ4 1543 aa11.17□□□□□ -0.62
SYNRG-224ENST00000618829 ADAMTS12P58397 1594 aa11.14□□□□□ -0.63
SYNRG-224ENST00000618829 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
SYNRG-224ENST00000618829 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
SYNRG-224ENST00000618829 ZEB1P37275 1124 aaPredicted RBP11.09□□□□□ -0.63
SYNRG-224ENST00000618829 CUX2O14529 1486 aa11.09□□□□□ -0.63
SYNRG-224ENST00000618829 PRXQ9BXM0 1461 aa11.09□□□□□ -0.63
SYNRG-224ENST00000618829 TOPBP1Q92547 1522 aa11.07□□□□□ -0.64
SYNRG-224ENST00000618829 EIF4G3O43432 1585 aaKnown RBP11.06□□□□□ -0.64
SYNRG-224ENST00000618829 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
SYNRG-224ENST00000618829 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
SYNRG-224ENST00000618829 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.64
SYNRG-224ENST00000618829 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
SYNRG-224ENST00000618829 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNRG-224ENST00000618829 CLASP1Q7Z460 1538 aa11□□□□□ -0.65
SYNRG-224ENST00000618829 EEA1Q15075 1411 aa10.96□□□□□ -0.65
SYNRG-224ENST00000618829 POLA1P09884 1462 aaPredicted RBP10.96□□□□□ -0.66
SYNRG-224ENST00000618829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.66
SYNRG-224ENST00000618829 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
SYNRG-224ENST00000618829 CHD1O14646 1710 aa10.95□□□□□ -0.66
SYNRG-224ENST00000618829 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
SYNRG-224ENST00000618829 CCER1Q8TC90 406 aaPredicted RBP10.94□□□□□ -0.66
SYNRG-224ENST00000618829 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
SYNRG-224ENST00000618829 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
SYNRG-224ENST00000618829 NESP48681 1621 aa10.93□□□□□ -0.66
SYNRG-224ENST00000618829 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
SYNRG-224ENST00000618829 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
SYNRG-224ENST00000618829 SOGA1O94964 1423 aa10.89□□□□□ -0.67
SYNRG-224ENST00000618829 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
SYNRG-224ENST00000618829 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
SYNRG-224ENST00000618829 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
SYNRG-224ENST00000618829 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
SYNRG-224ENST00000618829 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
SYNRG-224ENST00000618829 CEP162Q5TB80 1403 aa10.85□□□□□ -0.67
SYNRG-224ENST00000618829 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms