RNA–Protein interactions for RNA: ENST00000614196.1

SYNRG-221, Transcript of synergin gamma, humanhuman

TSL 4

Gene SYNRG, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-221ENST00000614196 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
SYNRG-221ENST00000614196 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
SYNRG-221ENST00000614196 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
SYNRG-221ENST00000614196 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
SYNRG-221ENST00000614196 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
SYNRG-221ENST00000614196 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
SYNRG-221ENST00000614196 FOXD1Q16676 465 aa17.08■□□□□ 0.32
SYNRG-221ENST00000614196 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
SYNRG-221ENST00000614196 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
SYNRG-221ENST00000614196 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
SYNRG-221ENST00000614196 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
SYNRG-221ENST00000614196 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
SYNRG-221ENST00000614196 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
SYNRG-221ENST00000614196 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
SYNRG-221ENST00000614196 NACADO15069 1562 aa16.34■□□□□ 0.21
SYNRG-221ENST00000614196 ABCC9O60706 1549 aa16.3■□□□□ 0.2
SYNRG-221ENST00000614196 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
SYNRG-221ENST00000614196 ADRA2BP18089 450 aa16.16■□□□□ 0.18
SYNRG-221ENST00000614196 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
SYNRG-221ENST00000614196 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
SYNRG-221ENST00000614196 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
SYNRG-221ENST00000614196 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
SYNRG-221ENST00000614196 MSH5O43196 834 aa15.87■□□□□ 0.13
SYNRG-221ENST00000614196 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
SYNRG-221ENST00000614196 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
SYNRG-221ENST00000614196 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
SYNRG-221ENST00000614196 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
SYNRG-221ENST00000614196 CECR2Q9BXF3 1484 aa15.5■□□□□ 0.07
SYNRG-221ENST00000614196 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
SYNRG-221ENST00000614196 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
SYNRG-221ENST00000614196 WIZO95785 1651 aa15.42■□□□□ 0.06
SYNRG-221ENST00000614196 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
SYNRG-221ENST00000614196 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYNRG-221ENST00000614196 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
SYNRG-221ENST00000614196 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
SYNRG-221ENST00000614196 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
SYNRG-221ENST00000614196 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
SYNRG-221ENST00000614196 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
SYNRG-221ENST00000614196 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
SYNRG-221ENST00000614196 HMGXB3Q12766 1538 aa15.07■□□□□ 0
SYNRG-221ENST00000614196 TRIM41Q8WV44 630 aa15.05■□□□□ -0
SYNRG-221ENST00000614196 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
SYNRG-221ENST00000614196 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
SYNRG-221ENST00000614196 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
SYNRG-221ENST00000614196 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
SYNRG-221ENST00000614196 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
SYNRG-221ENST00000614196 EEA1Q15075 1411 aa14.79□□□□□ -0.04
SYNRG-221ENST00000614196 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
SYNRG-221ENST00000614196 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
SYNRG-221ENST00000614196 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
SYNRG-221ENST00000614196 CFTRP13569 1480 aa14.69□□□□□ -0.06
SYNRG-221ENST00000614196 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
SYNRG-221ENST00000614196 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
SYNRG-221ENST00000614196 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
SYNRG-221ENST00000614196 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
SYNRG-221ENST00000614196 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
SYNRG-221ENST00000614196 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
SYNRG-221ENST00000614196 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
SYNRG-221ENST00000614196 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
SYNRG-221ENST00000614196 KIF21BO75037 1637 aa14.55□□□□□ -0.08
SYNRG-221ENST00000614196 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
SYNRG-221ENST00000614196 SOGA1O94964 1423 aa14.53□□□□□ -0.08
SYNRG-221ENST00000614196 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
SYNRG-221ENST00000614196 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
SYNRG-221ENST00000614196 CUX1P39880 1505 aa14.51□□□□□ -0.09
SYNRG-221ENST00000614196 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
SYNRG-221ENST00000614196 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
SYNRG-221ENST00000614196 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
SYNRG-221ENST00000614196 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
SYNRG-221ENST00000614196 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
SYNRG-221ENST00000614196 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
SYNRG-221ENST00000614196 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
SYNRG-221ENST00000614196 UBTFP17480 764 aaKnown RBP14.39□□□□□ -0.11
SYNRG-221ENST00000614196 CEP162Q5TB80 1403 aa14.39□□□□□ -0.11
SYNRG-221ENST00000614196 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
SYNRG-221ENST00000614196 TRIM26Q12899 539 aaPredicted RBP14.35□□□□□ -0.11
SYNRG-221ENST00000614196 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
SYNRG-221ENST00000614196 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
SYNRG-221ENST00000614196 NESP48681 1621 aa14.31□□□□□ -0.12
SYNRG-221ENST00000614196 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
SYNRG-221ENST00000614196 CUX2O14529 1486 aa14.3□□□□□ -0.12
SYNRG-221ENST00000614196 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
SYNRG-221ENST00000614196 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
SYNRG-221ENST00000614196 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
SYNRG-221ENST00000614196 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
SYNRG-221ENST00000614196 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
SYNRG-221ENST00000614196 CUL7Q14999 1698 aa14.26□□□□□ -0.13
SYNRG-221ENST00000614196 CLIP1P30622 1438 aa14.25□□□□□ -0.13
SYNRG-221ENST00000614196 WDR97A6NE52 1622 aa14.25□□□□□ -0.13
SYNRG-221ENST00000614196 POLA1P09884 1462 aaPredicted RBP14.24□□□□□ -0.13
SYNRG-221ENST00000614196 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
SYNRG-221ENST00000614196 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
SYNRG-221ENST00000614196 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
SYNRG-221ENST00000614196 IGF1RP08069 1367 aa14.15□□□□□ -0.14
SYNRG-221ENST00000614196 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
SYNRG-221ENST00000614196 APLP2Q06481 763 aa14.15□□□□□ -0.14
SYNRG-221ENST00000614196 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
SYNRG-221ENST00000614196 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SYNRG-221ENST00000614196 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
SYNRG-221ENST00000614196 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms