RNA–Protein interactions for RNA: ENST00000613299.1

CRX-207, Transcript of cone-rod homeobox, humanhuman

TSL 3 BASIC

Gene CRX, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-207ENST00000613299 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
CRX-207ENST00000613299 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
CRX-207ENST00000613299 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
CRX-207ENST00000613299 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
CRX-207ENST00000613299 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
CRX-207ENST00000613299 ABCC9O60706 1549 aa16.47■□□□□ 0.23
CRX-207ENST00000613299 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
CRX-207ENST00000613299 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
CRX-207ENST00000613299 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
CRX-207ENST00000613299 NACADO15069 1562 aa16.19■□□□□ 0.18
CRX-207ENST00000613299 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
CRX-207ENST00000613299 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
CRX-207ENST00000613299 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
CRX-207ENST00000613299 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
CRX-207ENST00000613299 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
CRX-207ENST00000613299 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
CRX-207ENST00000613299 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
CRX-207ENST00000613299 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
CRX-207ENST00000613299 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
CRX-207ENST00000613299 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
CRX-207ENST00000613299 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
CRX-207ENST00000613299 WIZO95785 1651 aa15.29■□□□□ 0.04
CRX-207ENST00000613299 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
CRX-207ENST00000613299 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.02
CRX-207ENST00000613299 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
CRX-207ENST00000613299 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
CRX-207ENST00000613299 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
CRX-207ENST00000613299 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0.01
CRX-207ENST00000613299 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
CRX-207ENST00000613299 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
CRX-207ENST00000613299 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
CRX-207ENST00000613299 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
CRX-207ENST00000613299 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
CRX-207ENST00000613299 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
CRX-207ENST00000613299 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
CRX-207ENST00000613299 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
CRX-207ENST00000613299 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
CRX-207ENST00000613299 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
CRX-207ENST00000613299 EEA1Q15075 1411 aa14.78□□□□□ -0.04
CRX-207ENST00000613299 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
CRX-207ENST00000613299 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
CRX-207ENST00000613299 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
CRX-207ENST00000613299 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
CRX-207ENST00000613299 CFTRP13569 1480 aa14.63□□□□□ -0.07
CRX-207ENST00000613299 APLP2Q06481 763 aa14.62□□□□□ -0.07
CRX-207ENST00000613299 SOGA1O94964 1423 aa14.61□□□□□ -0.07
CRX-207ENST00000613299 TRIM26Q12899 539 aaPredicted RBP14.59□□□□□ -0.07
CRX-207ENST00000613299 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
CRX-207ENST00000613299 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
CRX-207ENST00000613299 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
CRX-207ENST00000613299 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
CRX-207ENST00000613299 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
CRX-207ENST00000613299 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.08
CRX-207ENST00000613299 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
CRX-207ENST00000613299 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
CRX-207ENST00000613299 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
CRX-207ENST00000613299 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.1
CRX-207ENST00000613299 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
CRX-207ENST00000613299 CUX1P39880 1505 aa14.42□□□□□ -0.1
CRX-207ENST00000613299 CUX2O14529 1486 aa14.42□□□□□ -0.1
CRX-207ENST00000613299 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
CRX-207ENST00000613299 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
CRX-207ENST00000613299 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
CRX-207ENST00000613299 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
CRX-207ENST00000613299 CLIP1P30622 1438 aa14.38□□□□□ -0.11
CRX-207ENST00000613299 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
CRX-207ENST00000613299 NESP48681 1621 aa14.36□□□□□ -0.11
CRX-207ENST00000613299 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
CRX-207ENST00000613299 KIF21BO75037 1637 aa14.35□□□□□ -0.11
CRX-207ENST00000613299 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
CRX-207ENST00000613299 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
CRX-207ENST00000613299 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
CRX-207ENST00000613299 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
CRX-207ENST00000613299 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
CRX-207ENST00000613299 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
CRX-207ENST00000613299 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.13
CRX-207ENST00000613299 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
CRX-207ENST00000613299 HRCP23327 699 aa14.26□□□□□ -0.13
CRX-207ENST00000613299 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
CRX-207ENST00000613299 IGF1RP08069 1367 aa14.23□□□□□ -0.13
CRX-207ENST00000613299 PRXQ9BXM0 1461 aa14.23□□□□□ -0.13
CRX-207ENST00000613299 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
CRX-207ENST00000613299 RAD54L2Q9Y4B4 1467 aa14.22□□□□□ -0.13
CRX-207ENST00000613299 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
CRX-207ENST00000613299 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
CRX-207ENST00000613299 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
CRX-207ENST00000613299 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
CRX-207ENST00000613299 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
CRX-207ENST00000613299 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
CRX-207ENST00000613299 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
CRX-207ENST00000613299 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
CRX-207ENST00000613299 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
CRX-207ENST00000613299 FBLN2P98095 1184 aa14.08□□□□□ -0.16
CRX-207ENST00000613299 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
CRX-207ENST00000613299 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
CRX-207ENST00000613299 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
CRX-207ENST00000613299 CUL7Q14999 1698 aa14.06□□□□□ -0.16
CRX-207ENST00000613299 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
CRX-207ENST00000613299 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
CRX-207ENST00000613299 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms