RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
CSPG4P10-202ENST00000612093 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
CSPG4P10-202ENST00000612093 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
CSPG4P10-202ENST00000612093 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
CSPG4P10-202ENST00000612093 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
CSPG4P10-202ENST00000612093 ABCC9O60706 1549 aa20.26■□□□□ 0.83
CSPG4P10-202ENST00000612093 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
CSPG4P10-202ENST00000612093 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
CSPG4P10-202ENST00000612093 NACADO15069 1562 aa19.79■□□□□ 0.76
CSPG4P10-202ENST00000612093 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
CSPG4P10-202ENST00000612093 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
CSPG4P10-202ENST00000612093 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
CSPG4P10-202ENST00000612093 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
CSPG4P10-202ENST00000612093 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
CSPG4P10-202ENST00000612093 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
CSPG4P10-202ENST00000612093 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
CSPG4P10-202ENST00000612093 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
CSPG4P10-202ENST00000612093 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
CSPG4P10-202ENST00000612093 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
CSPG4P10-202ENST00000612093 WIZO95785 1651 aa18.88■□□□□ 0.61
CSPG4P10-202ENST00000612093 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
CSPG4P10-202ENST00000612093 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
CSPG4P10-202ENST00000612093 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
CSPG4P10-202ENST00000612093 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
CSPG4P10-202ENST00000612093 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
CSPG4P10-202ENST00000612093 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.55
CSPG4P10-202ENST00000612093 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.55
CSPG4P10-202ENST00000612093 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
CSPG4P10-202ENST00000612093 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
CSPG4P10-202ENST00000612093 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
CSPG4P10-202ENST00000612093 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
CSPG4P10-202ENST00000612093 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
CSPG4P10-202ENST00000612093 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
CSPG4P10-202ENST00000612093 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
CSPG4P10-202ENST00000612093 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
CSPG4P10-202ENST00000612093 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
CSPG4P10-202ENST00000612093 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
CSPG4P10-202ENST00000612093 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
CSPG4P10-202ENST00000612093 HRCP23327 699 aa18.16■□□□□ 0.5
CSPG4P10-202ENST00000612093 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
CSPG4P10-202ENST00000612093 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
CSPG4P10-202ENST00000612093 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
CSPG4P10-202ENST00000612093 CFTRP13569 1480 aa17.94■□□□□ 0.46
CSPG4P10-202ENST00000612093 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
CSPG4P10-202ENST00000612093 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
CSPG4P10-202ENST00000612093 SOGA1O94964 1423 aa17.87■□□□□ 0.45
CSPG4P10-202ENST00000612093 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
CSPG4P10-202ENST00000612093 NESP48681 1621 aa17.82■□□□□ 0.44
CSPG4P10-202ENST00000612093 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
CSPG4P10-202ENST00000612093 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
CSPG4P10-202ENST00000612093 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
CSPG4P10-202ENST00000612093 CUX1P39880 1505 aa17.77■□□□□ 0.43
CSPG4P10-202ENST00000612093 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
CSPG4P10-202ENST00000612093 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
CSPG4P10-202ENST00000612093 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
CSPG4P10-202ENST00000612093 EEA1Q15075 1411 aa17.67■□□□□ 0.42
CSPG4P10-202ENST00000612093 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
CSPG4P10-202ENST00000612093 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.4
CSPG4P10-202ENST00000612093 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
CSPG4P10-202ENST00000612093 UBTFP17480 764 aaKnown RBP17.57■□□□□ 0.4
CSPG4P10-202ENST00000612093 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
CSPG4P10-202ENST00000612093 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
CSPG4P10-202ENST00000612093 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
CSPG4P10-202ENST00000612093 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
CSPG4P10-202ENST00000612093 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
CSPG4P10-202ENST00000612093 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
CSPG4P10-202ENST00000612093 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
CSPG4P10-202ENST00000612093 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
CSPG4P10-202ENST00000612093 CUX2O14529 1486 aa17.5■□□□□ 0.39
CSPG4P10-202ENST00000612093 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
CSPG4P10-202ENST00000612093 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
CSPG4P10-202ENST00000612093 KIF21BO75037 1637 aa17.47■□□□□ 0.39
CSPG4P10-202ENST00000612093 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
CSPG4P10-202ENST00000612093 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
CSPG4P10-202ENST00000612093 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
CSPG4P10-202ENST00000612093 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
CSPG4P10-202ENST00000612093 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
CSPG4P10-202ENST00000612093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
CSPG4P10-202ENST00000612093 IGF1RP08069 1367 aa17.36■□□□□ 0.37
CSPG4P10-202ENST00000612093 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
CSPG4P10-202ENST00000612093 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
CSPG4P10-202ENST00000612093 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
CSPG4P10-202ENST00000612093 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
CSPG4P10-202ENST00000612093 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
CSPG4P10-202ENST00000612093 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
CSPG4P10-202ENST00000612093 CLIP1P30622 1438 aa17.29■□□□□ 0.36
CSPG4P10-202ENST00000612093 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
CSPG4P10-202ENST00000612093 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
CSPG4P10-202ENST00000612093 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
CSPG4P10-202ENST00000612093 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
CSPG4P10-202ENST00000612093 WDR62O43379 1518 aa17.21■□□□□ 0.34
CSPG4P10-202ENST00000612093 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
CSPG4P10-202ENST00000612093 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
CSPG4P10-202ENST00000612093 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
CSPG4P10-202ENST00000612093 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
CSPG4P10-202ENST00000612093 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
CSPG4P10-202ENST00000612093 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
CSPG4P10-202ENST00000612093 CUL7Q14999 1698 aa17.13■□□□□ 0.33
CSPG4P10-202ENST00000612093 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
CSPG4P10-202ENST00000612093 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms