RNA–Protein interactions for RNA: ENST00000610400.1

AL513478.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL513478.2, Length 988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513478.2-201ENST00000610400 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
AL513478.2-201ENST00000610400 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
AL513478.2-201ENST00000610400 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
AL513478.2-201ENST00000610400 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
AL513478.2-201ENST00000610400 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
AL513478.2-201ENST00000610400 FOXD1Q16676 465 aa14.7□□□□□ -0.06
AL513478.2-201ENST00000610400 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
AL513478.2-201ENST00000610400 ABCC9O60706 1549 aa14.36□□□□□ -0.11
AL513478.2-201ENST00000610400 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
AL513478.2-201ENST00000610400 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
AL513478.2-201ENST00000610400 NACADO15069 1562 aa13.82□□□□□ -0.2
AL513478.2-201ENST00000610400 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
AL513478.2-201ENST00000610400 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
AL513478.2-201ENST00000610400 ADRA2BP18089 450 aa13.73□□□□□ -0.21
AL513478.2-201ENST00000610400 MSH5O43196 834 aa13.72□□□□□ -0.21
AL513478.2-201ENST00000610400 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
AL513478.2-201ENST00000610400 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
AL513478.2-201ENST00000610400 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
AL513478.2-201ENST00000610400 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
AL513478.2-201ENST00000610400 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
AL513478.2-201ENST00000610400 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
AL513478.2-201ENST00000610400 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
AL513478.2-201ENST00000610400 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
AL513478.2-201ENST00000610400 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
AL513478.2-201ENST00000610400 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
AL513478.2-201ENST00000610400 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
AL513478.2-201ENST00000610400 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
AL513478.2-201ENST00000610400 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
AL513478.2-201ENST00000610400 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
AL513478.2-201ENST00000610400 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
AL513478.2-201ENST00000610400 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
AL513478.2-201ENST00000610400 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
AL513478.2-201ENST00000610400 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
AL513478.2-201ENST00000610400 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
AL513478.2-201ENST00000610400 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
AL513478.2-201ENST00000610400 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
AL513478.2-201ENST00000610400 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
AL513478.2-201ENST00000610400 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
AL513478.2-201ENST00000610400 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
AL513478.2-201ENST00000610400 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
AL513478.2-201ENST00000610400 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
AL513478.2-201ENST00000610400 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
AL513478.2-201ENST00000610400 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
AL513478.2-201ENST00000610400 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
AL513478.2-201ENST00000610400 WIZO95785 1651 aa12.41□□□□□ -0.42
AL513478.2-201ENST00000610400 CUX2O14529 1486 aa12.4□□□□□ -0.42
AL513478.2-201ENST00000610400 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
AL513478.2-201ENST00000610400 PDS5BQ9NTI5 1447 aa12.39□□□□□ -0.43
AL513478.2-201ENST00000610400 CADPSQ9ULU8 1353 aa12.36□□□□□ -0.43
AL513478.2-201ENST00000610400 NESP48681 1621 aa12.36□□□□□ -0.43
AL513478.2-201ENST00000610400 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
AL513478.2-201ENST00000610400 CFTRP13569 1480 aa12.24□□□□□ -0.45
AL513478.2-201ENST00000610400 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
AL513478.2-201ENST00000610400 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
AL513478.2-201ENST00000610400 MRC2Q9UBG0 1479 aa12.2□□□□□ -0.46
AL513478.2-201ENST00000610400 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
AL513478.2-201ENST00000610400 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
AL513478.2-201ENST00000610400 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
AL513478.2-201ENST00000610400 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
AL513478.2-201ENST00000610400 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
AL513478.2-201ENST00000610400 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
AL513478.2-201ENST00000610400 WDR62O43379 1518 aa12.13□□□□□ -0.47
AL513478.2-201ENST00000610400 KCNA4P22459 653 aa12.1□□□□□ -0.47
AL513478.2-201ENST00000610400 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
AL513478.2-201ENST00000610400 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
AL513478.2-201ENST00000610400 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
AL513478.2-201ENST00000610400 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
AL513478.2-201ENST00000610400 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
AL513478.2-201ENST00000610400 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
AL513478.2-201ENST00000610400 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
AL513478.2-201ENST00000610400 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.49
AL513478.2-201ENST00000610400 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
AL513478.2-201ENST00000610400 DNMBPQ6XZF7 1577 aa11.95□□□□□ -0.5
AL513478.2-201ENST00000610400 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
AL513478.2-201ENST00000610400 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
AL513478.2-201ENST00000610400 SOGA1O94964 1423 aa11.86□□□□□ -0.51
AL513478.2-201ENST00000610400 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
AL513478.2-201ENST00000610400 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
AL513478.2-201ENST00000610400 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
AL513478.2-201ENST00000610400 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
AL513478.2-201ENST00000610400 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
AL513478.2-201ENST00000610400 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
AL513478.2-201ENST00000610400 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
AL513478.2-201ENST00000610400 CUX1P39880 1505 aa11.77□□□□□ -0.52
AL513478.2-201ENST00000610400 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
AL513478.2-201ENST00000610400 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
AL513478.2-201ENST00000610400 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
AL513478.2-201ENST00000610400 FBLN2P98095 1184 aa11.75□□□□□ -0.53
AL513478.2-201ENST00000610400 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
AL513478.2-201ENST00000610400 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
AL513478.2-201ENST00000610400 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
AL513478.2-201ENST00000610400 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
AL513478.2-201ENST00000610400 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
AL513478.2-201ENST00000610400 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
AL513478.2-201ENST00000610400 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
AL513478.2-201ENST00000610400 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
AL513478.2-201ENST00000610400 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
AL513478.2-201ENST00000610400 CHD1O14646 1710 aa11.68□□□□□ -0.54
AL513478.2-201ENST00000610400 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
AL513478.2-201ENST00000610400 SYNJ2O15056 1496 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms