RNA–Protein interactions for RNA: ENST00000610310.3

CGA-202, Transcript of glycoprotein hormones, alpha polypeptide, humanhuman

TSL 3 BASIC

Gene CGA, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGA-202ENST00000610310 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
CGA-202ENST00000610310 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
CGA-202ENST00000610310 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
CGA-202ENST00000610310 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
CGA-202ENST00000610310 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
CGA-202ENST00000610310 FOXD1Q16676 465 aa18.57■□□□□ 0.56
CGA-202ENST00000610310 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
CGA-202ENST00000610310 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
CGA-202ENST00000610310 ADRA2BP18089 450 aa17.39■□□□□ 0.37
CGA-202ENST00000610310 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
CGA-202ENST00000610310 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
CGA-202ENST00000610310 MSH5O43196 834 aa17.3■□□□□ 0.36
CGA-202ENST00000610310 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
CGA-202ENST00000610310 ABCC9O60706 1549 aa16.74■□□□□ 0.27
CGA-202ENST00000610310 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
CGA-202ENST00000610310 NACADO15069 1562 aa16.17■□□□□ 0.18
CGA-202ENST00000610310 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
CGA-202ENST00000610310 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
CGA-202ENST00000610310 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
CGA-202ENST00000610310 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
CGA-202ENST00000610310 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
CGA-202ENST00000610310 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
CGA-202ENST00000610310 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
CGA-202ENST00000610310 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
CGA-202ENST00000610310 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
CGA-202ENST00000610310 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
CGA-202ENST00000610310 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
CGA-202ENST00000610310 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
CGA-202ENST00000610310 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
CGA-202ENST00000610310 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
CGA-202ENST00000610310 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
CGA-202ENST00000610310 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
CGA-202ENST00000610310 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
CGA-202ENST00000610310 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.03
CGA-202ENST00000610310 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
CGA-202ENST00000610310 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
CGA-202ENST00000610310 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
CGA-202ENST00000610310 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
CGA-202ENST00000610310 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ -0
CGA-202ENST00000610310 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
CGA-202ENST00000610310 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
CGA-202ENST00000610310 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
CGA-202ENST00000610310 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
CGA-202ENST00000610310 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
CGA-202ENST00000610310 WIZO95785 1651 aa14.9□□□□□ -0.02
CGA-202ENST00000610310 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
CGA-202ENST00000610310 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
CGA-202ENST00000610310 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
CGA-202ENST00000610310 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
CGA-202ENST00000610310 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
CGA-202ENST00000610310 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
CGA-202ENST00000610310 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
CGA-202ENST00000610310 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.06
CGA-202ENST00000610310 KCNA4P22459 653 aa14.63□□□□□ -0.07
CGA-202ENST00000610310 NESP48681 1621 aa14.56□□□□□ -0.08
CGA-202ENST00000610310 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
CGA-202ENST00000610310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
CGA-202ENST00000610310 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
CGA-202ENST00000610310 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
CGA-202ENST00000610310 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
CGA-202ENST00000610310 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
CGA-202ENST00000610310 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
CGA-202ENST00000610310 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
CGA-202ENST00000610310 CFTRP13569 1480 aa14.42□□□□□ -0.1
CGA-202ENST00000610310 THOC2Q8NI27 1593 aaKnown RBP14.39□□□□□ -0.11
CGA-202ENST00000610310 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
CGA-202ENST00000610310 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
CGA-202ENST00000610310 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
CGA-202ENST00000610310 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
CGA-202ENST00000610310 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
CGA-202ENST00000610310 WDR62O43379 1518 aa14.24□□□□□ -0.13
CGA-202ENST00000610310 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
CGA-202ENST00000610310 CUX2O14529 1486 aa14.22□□□□□ -0.13
CGA-202ENST00000610310 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
CGA-202ENST00000610310 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
CGA-202ENST00000610310 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
CGA-202ENST00000610310 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
CGA-202ENST00000610310 CUX1P39880 1505 aa14.08□□□□□ -0.16
CGA-202ENST00000610310 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
CGA-202ENST00000610310 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
CGA-202ENST00000610310 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
CGA-202ENST00000610310 TARBP1Q13395 1621 aaKnown RBP14.02□□□□□ -0.16
CGA-202ENST00000610310 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
CGA-202ENST00000610310 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
CGA-202ENST00000610310 CAPN15O75808 1086 aa13.99□□□□□ -0.17
CGA-202ENST00000610310 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
CGA-202ENST00000610310 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
CGA-202ENST00000610310 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
CGA-202ENST00000610310 IFT140Q96RY7 1462 aa13.96□□□□□ -0.17
CGA-202ENST00000610310 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
CGA-202ENST00000610310 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
CGA-202ENST00000610310 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
CGA-202ENST00000610310 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
CGA-202ENST00000610310 DSG3P32926 999 aa13.89□□□□□ -0.19
CGA-202ENST00000610310 SOGA1O94964 1423 aa13.88□□□□□ -0.19
CGA-202ENST00000610310 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
CGA-202ENST00000610310 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
CGA-202ENST00000610310 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
CGA-202ENST00000610310 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
CGA-202ENST00000610310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms