RNA–Protein interactions for RNA: ENST00000609737.1

LINC00899-203, long intergenic non-protein coding RNA 899, humanhuman

Gene LINC00899, Length 4,158 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-203ENST00000609737 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
LINC00899-203ENST00000609737 ABCC9O60706 1549 aa14.21□□□□□ -0.13
LINC00899-203ENST00000609737 AEBP2Q6ZN18 517 aaPredicted RBP14.2□□□□□ -0.14
LINC00899-203ENST00000609737 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
LINC00899-203ENST00000609737 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
LINC00899-203ENST00000609737 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
LINC00899-203ENST00000609737 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00899-203ENST00000609737 NACADO15069 1562 aa13.36□□□□□ -0.27
LINC00899-203ENST00000609737 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
LINC00899-203ENST00000609737 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
LINC00899-203ENST00000609737 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
LINC00899-203ENST00000609737 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
LINC00899-203ENST00000609737 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
LINC00899-203ENST00000609737 DCAF1Q9Y4B6 1507 aa12.97□□□□□ -0.33
LINC00899-203ENST00000609737 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
LINC00899-203ENST00000609737 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
LINC00899-203ENST00000609737 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
LINC00899-203ENST00000609737 BICRAQ9NZM4 1560 aa12.82□□□□□ -0.36
LINC00899-203ENST00000609737 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
LINC00899-203ENST00000609737 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
LINC00899-203ENST00000609737 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
LINC00899-203ENST00000609737 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
LINC00899-203ENST00000609737 MYT1Q01538 1121 aa12.62□□□□□ -0.39
LINC00899-203ENST00000609737 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
LINC00899-203ENST00000609737 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
LINC00899-203ENST00000609737 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
LINC00899-203ENST00000609737 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
LINC00899-203ENST00000609737 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
LINC00899-203ENST00000609737 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
LINC00899-203ENST00000609737 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
LINC00899-203ENST00000609737 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
LINC00899-203ENST00000609737 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
LINC00899-203ENST00000609737 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
LINC00899-203ENST00000609737 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
LINC00899-203ENST00000609737 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
LINC00899-203ENST00000609737 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
LINC00899-203ENST00000609737 NESP48681 1621 aa12.12□□□□□ -0.47
LINC00899-203ENST00000609737 CUX2O14529 1486 aa12.1□□□□□ -0.47
LINC00899-203ENST00000609737 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
LINC00899-203ENST00000609737 HRCP23327 699 aa12.07□□□□□ -0.48
LINC00899-203ENST00000609737 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
LINC00899-203ENST00000609737 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
LINC00899-203ENST00000609737 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
LINC00899-203ENST00000609737 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
LINC00899-203ENST00000609737 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
LINC00899-203ENST00000609737 WIZO95785 1651 aa12.02□□□□□ -0.48
LINC00899-203ENST00000609737 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
LINC00899-203ENST00000609737 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
LINC00899-203ENST00000609737 CEP164Q9UPV0 1460 aa11.97□□□□□ -0.49
LINC00899-203ENST00000609737 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
LINC00899-203ENST00000609737 FANCD2Q9BXW9 1451 aa11.93□□□□□ -0.5
LINC00899-203ENST00000609737 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
LINC00899-203ENST00000609737 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
LINC00899-203ENST00000609737 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
LINC00899-203ENST00000609737 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
LINC00899-203ENST00000609737 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
LINC00899-203ENST00000609737 FBLN2P98095 1184 aa11.86□□□□□ -0.51
LINC00899-203ENST00000609737 CFTRP13569 1480 aa11.85□□□□□ -0.51
LINC00899-203ENST00000609737 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
LINC00899-203ENST00000609737 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
LINC00899-203ENST00000609737 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
LINC00899-203ENST00000609737 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
LINC00899-203ENST00000609737 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
LINC00899-203ENST00000609737 WDR62O43379 1518 aa11.76□□□□□ -0.53
LINC00899-203ENST00000609737 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
LINC00899-203ENST00000609737 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.54
LINC00899-203ENST00000609737 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
LINC00899-203ENST00000609737 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
LINC00899-203ENST00000609737 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
LINC00899-203ENST00000609737 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
LINC00899-203ENST00000609737 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
LINC00899-203ENST00000609737 SOGA1O94964 1423 aa11.64□□□□□ -0.55
LINC00899-203ENST00000609737 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
LINC00899-203ENST00000609737 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
LINC00899-203ENST00000609737 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00899-203ENST00000609737 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
LINC00899-203ENST00000609737 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
LINC00899-203ENST00000609737 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
LINC00899-203ENST00000609737 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
LINC00899-203ENST00000609737 APLP2Q06481 763 aa11.57□□□□□ -0.56
LINC00899-203ENST00000609737 ERICH6Q7L0X2 663 aa11.56□□□□□ -0.56
LINC00899-203ENST00000609737 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
LINC00899-203ENST00000609737 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
LINC00899-203ENST00000609737 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
LINC00899-203ENST00000609737 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
LINC00899-203ENST00000609737 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
LINC00899-203ENST00000609737 WRNQ14191 1432 aaPredicted RBP eCLIP11.51□□□□□ -0.57
LINC00899-203ENST00000609737 PRKCSHP14314 528 aaPredicted RBP11.5□□□□□ -0.57
LINC00899-203ENST00000609737 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
LINC00899-203ENST00000609737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
LINC00899-203ENST00000609737 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
LINC00899-203ENST00000609737 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
LINC00899-203ENST00000609737 SNAPC4Q5SXM2 1469 aa11.46□□□□□ -0.57
LINC00899-203ENST00000609737 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.58
LINC00899-203ENST00000609737 CUX1P39880 1505 aa11.44□□□□□ -0.58
LINC00899-203ENST00000609737 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
LINC00899-203ENST00000609737 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00899-203ENST00000609737 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
LINC00899-203ENST00000609737 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
LINC00899-203ENST00000609737 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms