RNA–Protein interactions for RNA: ENST00000608647.5

LINC00635-220, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-220ENST00000608647 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
LINC00635-220ENST00000608647 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
LINC00635-220ENST00000608647 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
LINC00635-220ENST00000608647 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
LINC00635-220ENST00000608647 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
LINC00635-220ENST00000608647 FOXD1Q16676 465 aa19.36■□□□□ 0.69
LINC00635-220ENST00000608647 CCDC180Q9P1Z9 1646 aa19.06■□□□□ 0.64
LINC00635-220ENST00000608647 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
LINC00635-220ENST00000608647 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
LINC00635-220ENST00000608647 ADRA2BP18089 450 aa18.3■□□□□ 0.52
LINC00635-220ENST00000608647 ABCC9O60706 1549 aa18.21■□□□□ 0.51
LINC00635-220ENST00000608647 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
LINC00635-220ENST00000608647 MSH5O43196 834 aa17.99■□□□□ 0.47
LINC00635-220ENST00000608647 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
LINC00635-220ENST00000608647 MYO15BQ96JP2 1530 aa17.84■□□□□ 0.45
LINC00635-220ENST00000608647 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
LINC00635-220ENST00000608647 NACADO15069 1562 aa17.82■□□□□ 0.44
LINC00635-220ENST00000608647 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
LINC00635-220ENST00000608647 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
LINC00635-220ENST00000608647 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
LINC00635-220ENST00000608647 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
LINC00635-220ENST00000608647 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
LINC00635-220ENST00000608647 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
LINC00635-220ENST00000608647 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
LINC00635-220ENST00000608647 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
LINC00635-220ENST00000608647 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
LINC00635-220ENST00000608647 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
LINC00635-220ENST00000608647 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
LINC00635-220ENST00000608647 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
LINC00635-220ENST00000608647 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
LINC00635-220ENST00000608647 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
LINC00635-220ENST00000608647 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
LINC00635-220ENST00000608647 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
LINC00635-220ENST00000608647 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
LINC00635-220ENST00000608647 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
LINC00635-220ENST00000608647 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
LINC00635-220ENST00000608647 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
LINC00635-220ENST00000608647 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
LINC00635-220ENST00000608647 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
LINC00635-220ENST00000608647 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
LINC00635-220ENST00000608647 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
LINC00635-220ENST00000608647 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
LINC00635-220ENST00000608647 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
LINC00635-220ENST00000608647 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
LINC00635-220ENST00000608647 WIZO95785 1651 aa16.27■□□□□ 0.19
LINC00635-220ENST00000608647 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
LINC00635-220ENST00000608647 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
LINC00635-220ENST00000608647 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
LINC00635-220ENST00000608647 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC00635-220ENST00000608647 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
LINC00635-220ENST00000608647 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
LINC00635-220ENST00000608647 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
LINC00635-220ENST00000608647 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
LINC00635-220ENST00000608647 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
LINC00635-220ENST00000608647 KCNA4P22459 653 aa15.9■□□□□ 0.14
LINC00635-220ENST00000608647 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
LINC00635-220ENST00000608647 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
LINC00635-220ENST00000608647 CFTRP13569 1480 aa15.86■□□□□ 0.13
LINC00635-220ENST00000608647 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
LINC00635-220ENST00000608647 NESP48681 1621 aa15.79■□□□□ 0.12
LINC00635-220ENST00000608647 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
LINC00635-220ENST00000608647 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
LINC00635-220ENST00000608647 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
LINC00635-220ENST00000608647 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
LINC00635-220ENST00000608647 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
LINC00635-220ENST00000608647 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
LINC00635-220ENST00000608647 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
LINC00635-220ENST00000608647 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
LINC00635-220ENST00000608647 WDR62O43379 1518 aa15.59■□□□□ 0.09
LINC00635-220ENST00000608647 CUX2O14529 1486 aa15.59■□□□□ 0.09
LINC00635-220ENST00000608647 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
LINC00635-220ENST00000608647 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
LINC00635-220ENST00000608647 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
LINC00635-220ENST00000608647 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
LINC00635-220ENST00000608647 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
LINC00635-220ENST00000608647 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
LINC00635-220ENST00000608647 CUX1P39880 1505 aa15.42■□□□□ 0.06
LINC00635-220ENST00000608647 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
LINC00635-220ENST00000608647 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
LINC00635-220ENST00000608647 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
LINC00635-220ENST00000608647 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
LINC00635-220ENST00000608647 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
LINC00635-220ENST00000608647 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
LINC00635-220ENST00000608647 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
LINC00635-220ENST00000608647 SOGA1O94964 1423 aa15.28■□□□□ 0.04
LINC00635-220ENST00000608647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00635-220ENST00000608647 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
LINC00635-220ENST00000608647 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
LINC00635-220ENST00000608647 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
LINC00635-220ENST00000608647 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
LINC00635-220ENST00000608647 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
LINC00635-220ENST00000608647 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
LINC00635-220ENST00000608647 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
LINC00635-220ENST00000608647 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
LINC00635-220ENST00000608647 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
LINC00635-220ENST00000608647 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
LINC00635-220ENST00000608647 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
LINC00635-220ENST00000608647 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
LINC00635-220ENST00000608647 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
LINC00635-220ENST00000608647 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms