RNA–Protein interactions for RNA: ENST00000602213.5

SOX9-AS1-216, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 821 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-216ENST00000602213 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
SOX9-AS1-216ENST00000602213 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
SOX9-AS1-216ENST00000602213 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
SOX9-AS1-216ENST00000602213 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
SOX9-AS1-216ENST00000602213 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
SOX9-AS1-216ENST00000602213 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
SOX9-AS1-216ENST00000602213 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
SOX9-AS1-216ENST00000602213 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
SOX9-AS1-216ENST00000602213 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
SOX9-AS1-216ENST00000602213 FOXD1Q16676 465 aa11.99□□□□□ -0.49
SOX9-AS1-216ENST00000602213 NACADO15069 1562 aa11.9□□□□□ -0.5
SOX9-AS1-216ENST00000602213 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
SOX9-AS1-216ENST00000602213 ABCC9O60706 1549 aa11.81□□□□□ -0.52
SOX9-AS1-216ENST00000602213 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
SOX9-AS1-216ENST00000602213 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
SOX9-AS1-216ENST00000602213 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
SOX9-AS1-216ENST00000602213 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
SOX9-AS1-216ENST00000602213 SUPT5HO00267 1087 aaKnown RBP11.48□□□□□ -0.57
SOX9-AS1-216ENST00000602213 RSF1Q96T23 1441 aaPredicted RBP11.39□□□□□ -0.59
SOX9-AS1-216ENST00000602213 BAZ1AQ9NRL2 1556 aaPredicted RBP11.38□□□□□ -0.59
SOX9-AS1-216ENST00000602213 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
SOX9-AS1-216ENST00000602213 SMARCA4P51532 1647 aa11.33□□□□□ -0.6
SOX9-AS1-216ENST00000602213 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
SOX9-AS1-216ENST00000602213 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
SOX9-AS1-216ENST00000602213 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
SOX9-AS1-216ENST00000602213 WIZO95785 1651 aa11.29□□□□□ -0.6
SOX9-AS1-216ENST00000602213 MSH5O43196 834 aa11.27□□□□□ -0.61
SOX9-AS1-216ENST00000602213 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.61
SOX9-AS1-216ENST00000602213 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
SOX9-AS1-216ENST00000602213 PLPPR3Q6T4P5 718 aa11.2□□□□□ -0.62
SOX9-AS1-216ENST00000602213 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
SOX9-AS1-216ENST00000602213 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
SOX9-AS1-216ENST00000602213 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
SOX9-AS1-216ENST00000602213 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
SOX9-AS1-216ENST00000602213 ADRA2BP18089 450 aa11.07□□□□□ -0.64
SOX9-AS1-216ENST00000602213 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX9-AS1-216ENST00000602213 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
SOX9-AS1-216ENST00000602213 HMGXB3Q12766 1538 aa11□□□□□ -0.65
SOX9-AS1-216ENST00000602213 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
SOX9-AS1-216ENST00000602213 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
SOX9-AS1-216ENST00000602213 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
SOX9-AS1-216ENST00000602213 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
SOX9-AS1-216ENST00000602213 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
SOX9-AS1-216ENST00000602213 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
SOX9-AS1-216ENST00000602213 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
SOX9-AS1-216ENST00000602213 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
SOX9-AS1-216ENST00000602213 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
SOX9-AS1-216ENST00000602213 WRNQ14191 1432 aaPredicted RBP eCLIP10.74□□□□□ -0.69
SOX9-AS1-216ENST00000602213 EEA1Q15075 1411 aa10.74□□□□□ -0.69
SOX9-AS1-216ENST00000602213 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SOX9-AS1-216ENST00000602213 CFTRP13569 1480 aa10.71□□□□□ -0.69
SOX9-AS1-216ENST00000602213 KIF21BO75037 1637 aa10.64□□□□□ -0.71
SOX9-AS1-216ENST00000602213 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
SOX9-AS1-216ENST00000602213 CUX1P39880 1505 aa10.6□□□□□ -0.71
SOX9-AS1-216ENST00000602213 SOGA1O94964 1423 aa10.58□□□□□ -0.72
SOX9-AS1-216ENST00000602213 LAMC3Q9Y6N6 1575 aa10.58□□□□□ -0.72
SOX9-AS1-216ENST00000602213 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
SOX9-AS1-216ENST00000602213 GOLGA3Q08378 1498 aa10.56□□□□□ -0.72
SOX9-AS1-216ENST00000602213 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
SOX9-AS1-216ENST00000602213 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
SOX9-AS1-216ENST00000602213 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
SOX9-AS1-216ENST00000602213 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
SOX9-AS1-216ENST00000602213 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.72
SOX9-AS1-216ENST00000602213 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
SOX9-AS1-216ENST00000602213 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
SOX9-AS1-216ENST00000602213 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
SOX9-AS1-216ENST00000602213 WDR97A6NE52 1622 aa10.48□□□□□ -0.73
SOX9-AS1-216ENST00000602213 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
SOX9-AS1-216ENST00000602213 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
SOX9-AS1-216ENST00000602213 KIF27Q86VH2 1401 aa10.46□□□□□ -0.74
SOX9-AS1-216ENST00000602213 FGD5Q6ZNL6 1462 aa10.45□□□□□ -0.74
SOX9-AS1-216ENST00000602213 PRXQ9BXM0 1461 aa10.43□□□□□ -0.74
SOX9-AS1-216ENST00000602213 NESP48681 1621 aa10.43□□□□□ -0.74
SOX9-AS1-216ENST00000602213 TOPBP1Q92547 1522 aa10.43□□□□□ -0.74
SOX9-AS1-216ENST00000602213 RAPGEF2Q9Y4G8 1499 aa10.41□□□□□ -0.74
SOX9-AS1-216ENST00000602213 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
SOX9-AS1-216ENST00000602213 CUL7Q14999 1698 aa10.41□□□□□ -0.74
SOX9-AS1-216ENST00000602213 ABCA10Q8WWZ4 1543 aa10.39□□□□□ -0.75
SOX9-AS1-216ENST00000602213 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
SOX9-AS1-216ENST00000602213 CUX2O14529 1486 aa10.37□□□□□ -0.75
SOX9-AS1-216ENST00000602213 URB2Q14146 1524 aaKnown RBP10.37□□□□□ -0.75
SOX9-AS1-216ENST00000602213 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
SOX9-AS1-216ENST00000602213 TRIM26Q12899 539 aaPredicted RBP10.36□□□□□ -0.75
SOX9-AS1-216ENST00000602213 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
SOX9-AS1-216ENST00000602213 CLIP1P30622 1438 aa10.34□□□□□ -0.75
SOX9-AS1-216ENST00000602213 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
SOX9-AS1-216ENST00000602213 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
SOX9-AS1-216ENST00000602213 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
SOX9-AS1-216ENST00000602213 PCGF6Q9BYE7 350 aa10.32□□□□□ -0.76
SOX9-AS1-216ENST00000602213 TARBP1Q13395 1621 aaKnown RBP10.32□□□□□ -0.76
SOX9-AS1-216ENST00000602213 VPS8Q8N3P4 1428 aa10.32□□□□□ -0.76
SOX9-AS1-216ENST00000602213 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
SOX9-AS1-216ENST00000602213 WDR62O43379 1518 aa10.29□□□□□ -0.76
SOX9-AS1-216ENST00000602213 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
SOX9-AS1-216ENST00000602213 IGF1RP08069 1367 aa10.27□□□□□ -0.76
SOX9-AS1-216ENST00000602213 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
SOX9-AS1-216ENST00000602213 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
SOX9-AS1-216ENST00000602213 CARMIL1Q5VZK9 1371 aa10.25□□□□□ -0.77
SOX9-AS1-216ENST00000602213 EFCAB5A4FU69 1503 aa10.24□□□□□ -0.77
SOX9-AS1-216ENST00000602213 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms