RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
PSMC4-206ENST00000601697 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
PSMC4-206ENST00000601697 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
PSMC4-206ENST00000601697 ABCC9O60706 1549 aa25.39■■□□□ 1.65
PSMC4-206ENST00000601697 DCAF1Q9Y4B6 1507 aa25.06■■□□□ 1.6
PSMC4-206ENST00000601697 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
PSMC4-206ENST00000601697 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
PSMC4-206ENST00000601697 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
PSMC4-206ENST00000601697 NACADO15069 1562 aa24.75■■□□□ 1.55
PSMC4-206ENST00000601697 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
PSMC4-206ENST00000601697 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
PSMC4-206ENST00000601697 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
PSMC4-206ENST00000601697 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
PSMC4-206ENST00000601697 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
PSMC4-206ENST00000601697 PABPN1Q86U42 306 aaKnown RBP eCLIP23.82■■□□□ 1.4
PSMC4-206ENST00000601697 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
PSMC4-206ENST00000601697 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
PSMC4-206ENST00000601697 CECR2Q9BXF3 1484 aa23.54■■□□□ 1.36
PSMC4-206ENST00000601697 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
PSMC4-206ENST00000601697 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.34
PSMC4-206ENST00000601697 WIZO95785 1651 aa23.26■■□□□ 1.31
PSMC4-206ENST00000601697 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
PSMC4-206ENST00000601697 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
PSMC4-206ENST00000601697 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
PSMC4-206ENST00000601697 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
PSMC4-206ENST00000601697 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
PSMC4-206ENST00000601697 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
PSMC4-206ENST00000601697 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
PSMC4-206ENST00000601697 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
PSMC4-206ENST00000601697 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
PSMC4-206ENST00000601697 HRCP23327 699 aa22.84■■□□□ 1.25
PSMC4-206ENST00000601697 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
PSMC4-206ENST00000601697 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
PSMC4-206ENST00000601697 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
PSMC4-206ENST00000601697 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
PSMC4-206ENST00000601697 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
PSMC4-206ENST00000601697 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
PSMC4-206ENST00000601697 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
PSMC4-206ENST00000601697 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
PSMC4-206ENST00000601697 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
PSMC4-206ENST00000601697 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
PSMC4-206ENST00000601697 CFTRP13569 1480 aa22.22■■□□□ 1.15
PSMC4-206ENST00000601697 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.15
PSMC4-206ENST00000601697 NESP48681 1621 aa22.17■■□□□ 1.14
PSMC4-206ENST00000601697 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
PSMC4-206ENST00000601697 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
PSMC4-206ENST00000601697 EEA1Q15075 1411 aa22.15■■□□□ 1.14
PSMC4-206ENST00000601697 LAMC3Q9Y6N6 1575 aa22.14■■□□□ 1.13
PSMC4-206ENST00000601697 SOGA1O94964 1423 aa22.11■■□□□ 1.13
PSMC4-206ENST00000601697 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
PSMC4-206ENST00000601697 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
PSMC4-206ENST00000601697 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
PSMC4-206ENST00000601697 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
PSMC4-206ENST00000601697 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
PSMC4-206ENST00000601697 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
PSMC4-206ENST00000601697 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
PSMC4-206ENST00000601697 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.11
PSMC4-206ENST00000601697 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
PSMC4-206ENST00000601697 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
PSMC4-206ENST00000601697 CUX1P39880 1505 aa21.9■■□□□ 1.1
PSMC4-206ENST00000601697 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
PSMC4-206ENST00000601697 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
PSMC4-206ENST00000601697 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
PSMC4-206ENST00000601697 KIF21BO75037 1637 aa21.83■■□□□ 1.09
PSMC4-206ENST00000601697 CEP162Q5TB80 1403 aa21.83■■□□□ 1.08
PSMC4-206ENST00000601697 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
PSMC4-206ENST00000601697 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
PSMC4-206ENST00000601697 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
PSMC4-206ENST00000601697 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
PSMC4-206ENST00000601697 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
PSMC4-206ENST00000601697 KIF27Q86VH2 1401 aa21.69■■□□□ 1.06
PSMC4-206ENST00000601697 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
PSMC4-206ENST00000601697 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
PSMC4-206ENST00000601697 WDR62O43379 1518 aa21.66■■□□□ 1.06
PSMC4-206ENST00000601697 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
PSMC4-206ENST00000601697 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
PSMC4-206ENST00000601697 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
PSMC4-206ENST00000601697 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
PSMC4-206ENST00000601697 CUX2O14529 1486 aa21.55■■□□□ 1.04
PSMC4-206ENST00000601697 POLA1P09884 1462 aaPredicted RBP21.55■■□□□ 1.04
PSMC4-206ENST00000601697 CLIP1P30622 1438 aa21.53■■□□□ 1.04
PSMC4-206ENST00000601697 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
PSMC4-206ENST00000601697 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
PSMC4-206ENST00000601697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
PSMC4-206ENST00000601697 IGF1RP08069 1367 aa21.43■■□□□ 1.02
PSMC4-206ENST00000601697 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
PSMC4-206ENST00000601697 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
PSMC4-206ENST00000601697 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
PSMC4-206ENST00000601697 WDR97A6NE52 1622 aa21.39■■□□□ 1.02
PSMC4-206ENST00000601697 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
PSMC4-206ENST00000601697 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
PSMC4-206ENST00000601697 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1
PSMC4-206ENST00000601697 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
PSMC4-206ENST00000601697 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
PSMC4-206ENST00000601697 APLP2Q06481 763 aa21.28■■□□□ 1
PSMC4-206ENST00000601697 ARAP1Q96P48 1450 aa21.28■■□□□ 1
PSMC4-206ENST00000601697 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
PSMC4-206ENST00000601697 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
PSMC4-206ENST00000601697 CUL7Q14999 1698 aa21.25■□□□□ 0.99
PSMC4-206ENST00000601697 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms