RNA–Protein interactions for RNA: ENST00000601613.1

SAMD4B-211, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 2,690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-211ENST00000601613 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
SAMD4B-211ENST00000601613 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
SAMD4B-211ENST00000601613 ABCC9O60706 1549 aa15.09■□□□□ 0.01
SAMD4B-211ENST00000601613 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
SAMD4B-211ENST00000601613 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
SAMD4B-211ENST00000601613 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
SAMD4B-211ENST00000601613 NACADO15069 1562 aa14.53□□□□□ -0.08
SAMD4B-211ENST00000601613 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
SAMD4B-211ENST00000601613 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
SAMD4B-211ENST00000601613 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
SAMD4B-211ENST00000601613 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
SAMD4B-211ENST00000601613 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
SAMD4B-211ENST00000601613 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
SAMD4B-211ENST00000601613 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
SAMD4B-211ENST00000601613 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
SAMD4B-211ENST00000601613 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
SAMD4B-211ENST00000601613 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
SAMD4B-211ENST00000601613 HRCP23327 699 aa13.77□□□□□ -0.21
SAMD4B-211ENST00000601613 PCGF6Q9BYE7 350 aa13.75□□□□□ -0.21
SAMD4B-211ENST00000601613 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.22
SAMD4B-211ENST00000601613 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
SAMD4B-211ENST00000601613 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
SAMD4B-211ENST00000601613 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
SAMD4B-211ENST00000601613 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
SAMD4B-211ENST00000601613 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
SAMD4B-211ENST00000601613 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
SAMD4B-211ENST00000601613 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
SAMD4B-211ENST00000601613 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
SAMD4B-211ENST00000601613 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.26
SAMD4B-211ENST00000601613 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
SAMD4B-211ENST00000601613 SMARCA2P51531 1590 aa13.42□□□□□ -0.26
SAMD4B-211ENST00000601613 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
SAMD4B-211ENST00000601613 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
SAMD4B-211ENST00000601613 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
SAMD4B-211ENST00000601613 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
SAMD4B-211ENST00000601613 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
SAMD4B-211ENST00000601613 WIZO95785 1651 aa13.34□□□□□ -0.27
SAMD4B-211ENST00000601613 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
SAMD4B-211ENST00000601613 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
SAMD4B-211ENST00000601613 TRIM26Q12899 539 aaPredicted RBP13.2□□□□□ -0.3
SAMD4B-211ENST00000601613 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
SAMD4B-211ENST00000601613 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
SAMD4B-211ENST00000601613 NESP48681 1621 aa13.09□□□□□ -0.31
SAMD4B-211ENST00000601613 MYT1Q01538 1121 aa13.07□□□□□ -0.32
SAMD4B-211ENST00000601613 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
SAMD4B-211ENST00000601613 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
SAMD4B-211ENST00000601613 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
SAMD4B-211ENST00000601613 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
SAMD4B-211ENST00000601613 CFTRP13569 1480 aa12.99□□□□□ -0.33
SAMD4B-211ENST00000601613 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
SAMD4B-211ENST00000601613 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
SAMD4B-211ENST00000601613 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
SAMD4B-211ENST00000601613 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
SAMD4B-211ENST00000601613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
SAMD4B-211ENST00000601613 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
SAMD4B-211ENST00000601613 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
SAMD4B-211ENST00000601613 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
SAMD4B-211ENST00000601613 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
SAMD4B-211ENST00000601613 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
SAMD4B-211ENST00000601613 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
SAMD4B-211ENST00000601613 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
SAMD4B-211ENST00000601613 CUX2O14529 1486 aa12.78□□□□□ -0.36
SAMD4B-211ENST00000601613 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.36
SAMD4B-211ENST00000601613 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
SAMD4B-211ENST00000601613 WDR62O43379 1518 aa12.76□□□□□ -0.37
SAMD4B-211ENST00000601613 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
SAMD4B-211ENST00000601613 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
SAMD4B-211ENST00000601613 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
SAMD4B-211ENST00000601613 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
SAMD4B-211ENST00000601613 CUX1P39880 1505 aa12.64□□□□□ -0.39
SAMD4B-211ENST00000601613 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SAMD4B-211ENST00000601613 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
SAMD4B-211ENST00000601613 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
SAMD4B-211ENST00000601613 SOGA1O94964 1423 aa12.59□□□□□ -0.39
SAMD4B-211ENST00000601613 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
SAMD4B-211ENST00000601613 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
SAMD4B-211ENST00000601613 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
SAMD4B-211ENST00000601613 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
SAMD4B-211ENST00000601613 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
SAMD4B-211ENST00000601613 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
SAMD4B-211ENST00000601613 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
SAMD4B-211ENST00000601613 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
SAMD4B-211ENST00000601613 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
SAMD4B-211ENST00000601613 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
SAMD4B-211ENST00000601613 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
SAMD4B-211ENST00000601613 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
SAMD4B-211ENST00000601613 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
SAMD4B-211ENST00000601613 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
SAMD4B-211ENST00000601613 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
SAMD4B-211ENST00000601613 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
SAMD4B-211ENST00000601613 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
SAMD4B-211ENST00000601613 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
SAMD4B-211ENST00000601613 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
SAMD4B-211ENST00000601613 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
SAMD4B-211ENST00000601613 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.41
SAMD4B-211ENST00000601613 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
SAMD4B-211ENST00000601613 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
SAMD4B-211ENST00000601613 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
SAMD4B-211ENST00000601613 TNIKQ9UKE5 1360 aa12.38□□□□□ -0.43
SAMD4B-211ENST00000601613 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms