RNA–Protein interactions for RNA: ENST00000599023.5

CPT1C-221, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 2

Gene CPT1C, Length 2,518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-221ENST00000599023 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
CPT1C-221ENST00000599023 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
CPT1C-221ENST00000599023 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
CPT1C-221ENST00000599023 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
CPT1C-221ENST00000599023 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
CPT1C-221ENST00000599023 DCAF1Q9Y4B6 1507 aa25.56■■□□□ 1.68
CPT1C-221ENST00000599023 ABCC9O60706 1549 aa25.39■■□□□ 1.65
CPT1C-221ENST00000599023 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
CPT1C-221ENST00000599023 NACADO15069 1562 aa25■■□□□ 1.59
CPT1C-221ENST00000599023 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
CPT1C-221ENST00000599023 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
CPT1C-221ENST00000599023 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
CPT1C-221ENST00000599023 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
CPT1C-221ENST00000599023 PELP1Q8IZL8 1130 aaKnown RBP24.22■■□□□ 1.47
CPT1C-221ENST00000599023 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
CPT1C-221ENST00000599023 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
CPT1C-221ENST00000599023 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CPT1C-221ENST00000599023 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
CPT1C-221ENST00000599023 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
CPT1C-221ENST00000599023 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
CPT1C-221ENST00000599023 HRCP23327 699 aa23.83■■□□□ 1.41
CPT1C-221ENST00000599023 WIZO95785 1651 aa23.81■■□□□ 1.4
CPT1C-221ENST00000599023 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
CPT1C-221ENST00000599023 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
CPT1C-221ENST00000599023 MYT1Q01538 1121 aa23.57■■□□□ 1.36
CPT1C-221ENST00000599023 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
CPT1C-221ENST00000599023 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
CPT1C-221ENST00000599023 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
CPT1C-221ENST00000599023 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
CPT1C-221ENST00000599023 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
CPT1C-221ENST00000599023 EIF4G1Q04637 1599 aaKnown RBP23.3■■□□□ 1.32
CPT1C-221ENST00000599023 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
CPT1C-221ENST00000599023 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
CPT1C-221ENST00000599023 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
CPT1C-221ENST00000599023 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
CPT1C-221ENST00000599023 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
CPT1C-221ENST00000599023 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
CPT1C-221ENST00000599023 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
CPT1C-221ENST00000599023 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.25
CPT1C-221ENST00000599023 SCAF1Q9H7N4 1312 aaKnown RBP22.89■■□□□ 1.25
CPT1C-221ENST00000599023 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
CPT1C-221ENST00000599023 PCGF6Q9BYE7 350 aa22.81■■□□□ 1.24
CPT1C-221ENST00000599023 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
CPT1C-221ENST00000599023 CFTRP13569 1480 aa22.67■■□□□ 1.22
CPT1C-221ENST00000599023 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
CPT1C-221ENST00000599023 SOGA1O94964 1423 aa22.57■■□□□ 1.2
CPT1C-221ENST00000599023 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
CPT1C-221ENST00000599023 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
CPT1C-221ENST00000599023 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
CPT1C-221ENST00000599023 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
CPT1C-221ENST00000599023 EEA1Q15075 1411 aa22.45■■□□□ 1.18
CPT1C-221ENST00000599023 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
CPT1C-221ENST00000599023 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
CPT1C-221ENST00000599023 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
CPT1C-221ENST00000599023 CUX1P39880 1505 aa22.42■■□□□ 1.18
CPT1C-221ENST00000599023 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
CPT1C-221ENST00000599023 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.17
CPT1C-221ENST00000599023 NESP48681 1621 aa22.35■■□□□ 1.17
CPT1C-221ENST00000599023 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
CPT1C-221ENST00000599023 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
CPT1C-221ENST00000599023 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
CPT1C-221ENST00000599023 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
CPT1C-221ENST00000599023 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
CPT1C-221ENST00000599023 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
CPT1C-221ENST00000599023 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
CPT1C-221ENST00000599023 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
CPT1C-221ENST00000599023 KIF21BO75037 1637 aa22.15■■□□□ 1.14
CPT1C-221ENST00000599023 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.14
CPT1C-221ENST00000599023 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
CPT1C-221ENST00000599023 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
CPT1C-221ENST00000599023 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
CPT1C-221ENST00000599023 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
CPT1C-221ENST00000599023 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
CPT1C-221ENST00000599023 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.12
CPT1C-221ENST00000599023 CUX2O14529 1486 aa22.06■■□□□ 1.12
CPT1C-221ENST00000599023 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
CPT1C-221ENST00000599023 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
CPT1C-221ENST00000599023 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CPT1C-221ENST00000599023 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
CPT1C-221ENST00000599023 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
CPT1C-221ENST00000599023 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
CPT1C-221ENST00000599023 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
CPT1C-221ENST00000599023 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
CPT1C-221ENST00000599023 IGF1RP08069 1367 aa21.95■■□□□ 1.1
CPT1C-221ENST00000599023 GTF3C3Q9Y5Q9 886 aa21.92■■□□□ 1.1
CPT1C-221ENST00000599023 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
CPT1C-221ENST00000599023 CLIP1P30622 1438 aa21.87■■□□□ 1.09
CPT1C-221ENST00000599023 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
CPT1C-221ENST00000599023 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
CPT1C-221ENST00000599023 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.08
CPT1C-221ENST00000599023 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
CPT1C-221ENST00000599023 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
CPT1C-221ENST00000599023 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
CPT1C-221ENST00000599023 BCL11AQ9H165 835 aa21.74■■□□□ 1.07
CPT1C-221ENST00000599023 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
CPT1C-221ENST00000599023 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
CPT1C-221ENST00000599023 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
CPT1C-221ENST00000599023 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
CPT1C-221ENST00000599023 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
CPT1C-221ENST00000599023 WDR62O43379 1518 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms