RNA–Protein interactions for RNA: ENST00000597775.1

LINC02028-208, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-208ENST00000597775 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
LINC02028-208ENST00000597775 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
LINC02028-208ENST00000597775 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
LINC02028-208ENST00000597775 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
LINC02028-208ENST00000597775 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
LINC02028-208ENST00000597775 FOXD1Q16676 465 aa16.31■□□□□ 0.2
LINC02028-208ENST00000597775 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
LINC02028-208ENST00000597775 ABCC9O60706 1549 aa15.17■□□□□ 0.02
LINC02028-208ENST00000597775 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
LINC02028-208ENST00000597775 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
LINC02028-208ENST00000597775 ADRA2BP18089 450 aa15.09■□□□□ 0.01
LINC02028-208ENST00000597775 MSH5O43196 834 aa15.08■□□□□ 0
LINC02028-208ENST00000597775 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
LINC02028-208ENST00000597775 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
LINC02028-208ENST00000597775 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
LINC02028-208ENST00000597775 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
LINC02028-208ENST00000597775 NACADO15069 1562 aa14.17□□□□□ -0.14
LINC02028-208ENST00000597775 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
LINC02028-208ENST00000597775 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
LINC02028-208ENST00000597775 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC02028-208ENST00000597775 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
LINC02028-208ENST00000597775 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.19
LINC02028-208ENST00000597775 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
LINC02028-208ENST00000597775 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
LINC02028-208ENST00000597775 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
LINC02028-208ENST00000597775 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
LINC02028-208ENST00000597775 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
LINC02028-208ENST00000597775 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
LINC02028-208ENST00000597775 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
LINC02028-208ENST00000597775 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
LINC02028-208ENST00000597775 SCRIBQ14160 1630 aa13.55□□□□□ -0.24
LINC02028-208ENST00000597775 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
LINC02028-208ENST00000597775 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
LINC02028-208ENST00000597775 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
LINC02028-208ENST00000597775 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
LINC02028-208ENST00000597775 CUX2O14529 1486 aa13.26□□□□□ -0.29
LINC02028-208ENST00000597775 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
LINC02028-208ENST00000597775 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
LINC02028-208ENST00000597775 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
LINC02028-208ENST00000597775 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
LINC02028-208ENST00000597775 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
LINC02028-208ENST00000597775 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
LINC02028-208ENST00000597775 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
LINC02028-208ENST00000597775 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
LINC02028-208ENST00000597775 NESP48681 1621 aa12.95□□□□□ -0.34
LINC02028-208ENST00000597775 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
LINC02028-208ENST00000597775 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
LINC02028-208ENST00000597775 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
LINC02028-208ENST00000597775 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
LINC02028-208ENST00000597775 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
LINC02028-208ENST00000597775 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
LINC02028-208ENST00000597775 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
LINC02028-208ENST00000597775 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
LINC02028-208ENST00000597775 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
LINC02028-208ENST00000597775 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
LINC02028-208ENST00000597775 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
LINC02028-208ENST00000597775 WDR62O43379 1518 aa12.69□□□□□ -0.38
LINC02028-208ENST00000597775 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
LINC02028-208ENST00000597775 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
LINC02028-208ENST00000597775 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
LINC02028-208ENST00000597775 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
LINC02028-208ENST00000597775 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
LINC02028-208ENST00000597775 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
LINC02028-208ENST00000597775 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
LINC02028-208ENST00000597775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC02028-208ENST00000597775 WIZO95785 1651 aa12.48□□□□□ -0.41
LINC02028-208ENST00000597775 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
LINC02028-208ENST00000597775 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
LINC02028-208ENST00000597775 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
LINC02028-208ENST00000597775 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
LINC02028-208ENST00000597775 CFTRP13569 1480 aa12.44□□□□□ -0.42
LINC02028-208ENST00000597775 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
LINC02028-208ENST00000597775 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
LINC02028-208ENST00000597775 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
LINC02028-208ENST00000597775 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
LINC02028-208ENST00000597775 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
LINC02028-208ENST00000597775 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
LINC02028-208ENST00000597775 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
LINC02028-208ENST00000597775 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
LINC02028-208ENST00000597775 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
LINC02028-208ENST00000597775 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
LINC02028-208ENST00000597775 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
LINC02028-208ENST00000597775 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
LINC02028-208ENST00000597775 CHD1O14646 1710 aa12.24□□□□□ -0.45
LINC02028-208ENST00000597775 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
LINC02028-208ENST00000597775 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
LINC02028-208ENST00000597775 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
LINC02028-208ENST00000597775 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
LINC02028-208ENST00000597775 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
LINC02028-208ENST00000597775 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
LINC02028-208ENST00000597775 CAPN15O75808 1086 aa12.15□□□□□ -0.46
LINC02028-208ENST00000597775 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
LINC02028-208ENST00000597775 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC02028-208ENST00000597775 DSG3P32926 999 aa12.12□□□□□ -0.47
LINC02028-208ENST00000597775 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
LINC02028-208ENST00000597775 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
LINC02028-208ENST00000597775 KCNA4P22459 653 aa12.07□□□□□ -0.48
LINC02028-208ENST00000597775 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
LINC02028-208ENST00000597775 FBLN2P98095 1184 aa12.06□□□□□ -0.48
LINC02028-208ENST00000597775 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms