RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 NISCHQ9Y2I1 1504 aa49.13■■■■■ 5.46
SPTBN4-209ENST00000596411 CCDC180Q9P1Z9 1646 aa42.29■■■■■ 4.36
SPTBN4-209ENST00000596411 ZCCHC6Q5VYS8 1495 aaKnown RBP41.57■■■■■ 4.25
SPTBN4-209ENST00000596411 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.13
SPTBN4-209ENST00000596411 DCAF1Q9Y4B6 1507 aa40.71■■■■■ 4.11
SPTBN4-209ENST00000596411 DCAF8L2P0C7V8 631 aa39.9■■■■□ 3.98
SPTBN4-209ENST00000596411 SUPT5HO00267 1087 aaKnown RBP39.89■■■■□ 3.98
SPTBN4-209ENST00000596411 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
SPTBN4-209ENST00000596411 ABCC9O60706 1549 aa39.18■■■■□ 3.86
SPTBN4-209ENST00000596411 NACADO15069 1562 aa39.05■■■■□ 3.84
SPTBN4-209ENST00000596411 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
SPTBN4-209ENST00000596411 CHIC1Q5VXU3 224 aa38.97■■■■□ 3.83
SPTBN4-209ENST00000596411 RSF1Q96T23 1441 aaPredicted RBP38.6■■■■□ 3.77
SPTBN4-209ENST00000596411 RB1CC1Q8TDY2 1594 aa38.38■■■■□ 3.73
SPTBN4-209ENST00000596411 CECR2Q9BXF3 1484 aa38.04■■■■□ 3.68
SPTBN4-209ENST00000596411 MROH2BQ7Z745 1585 aa38■■■■□ 3.67
SPTBN4-209ENST00000596411 BAZ1AQ9NRL2 1556 aaPredicted RBP37.83■■■■□ 3.65
SPTBN4-209ENST00000596411 WIZO95785 1651 aa37.75■■■■□ 3.63
SPTBN4-209ENST00000596411 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
SPTBN4-209ENST00000596411 SMARCA4P51532 1647 aa37.51■■■■□ 3.59
SPTBN4-209ENST00000596411 LOC105371045A0A1W2PR82 267 aa37.45■■■■□ 3.59
SPTBN4-209ENST00000596411 TRIM41Q8WV44 630 aa37.45■■■■□ 3.59
SPTBN4-209ENST00000596411 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
SPTBN4-209ENST00000596411 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
SPTBN4-209ENST00000596411 BICRAQ9NZM4 1560 aa37.26■■■■□ 3.56
SPTBN4-209ENST00000596411 HRCP23327 699 aa37.18■■■■□ 3.54
SPTBN4-209ENST00000596411 SMARCA2P51531 1590 aa37.11■■■■□ 3.53
SPTBN4-209ENST00000596411 PCGF6Q9BYE7 350 aa37.09■■■■□ 3.53
SPTBN4-209ENST00000596411 PEG3Q9GZU2 1588 aa37.06■■■■□ 3.52
SPTBN4-209ENST00000596411 CCDC88BA6NC98 1476 aa37.03■■■■□ 3.52
SPTBN4-209ENST00000596411 TRIM26Q12899 539 aaPredicted RBP36.84■■■■□ 3.49
SPTBN4-209ENST00000596411 FAM9AQ8IZU1 332 aaPredicted RBP36.73■■■■□ 3.47
SPTBN4-209ENST00000596411 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
SPTBN4-209ENST00000596411 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
SPTBN4-209ENST00000596411 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
SPTBN4-209ENST00000596411 EEA1Q15075 1411 aa36.49■■■■□ 3.43
SPTBN4-209ENST00000596411 BAZ1BQ9UIG0 1483 aaKnown RBP36.39■■■■□ 3.42
SPTBN4-209ENST00000596411 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.4
SPTBN4-209ENST00000596411 SOGA1O94964 1423 aa36.21■■■■□ 3.39
SPTBN4-209ENST00000596411 TNIKQ9UKE5 1360 aa36.15■■■■□ 3.38
SPTBN4-209ENST00000596411 HMGXB3Q12766 1538 aa36.13■■■■□ 3.37
SPTBN4-209ENST00000596411 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
SPTBN4-209ENST00000596411 EHMT2Q96KQ7 1210 aa36.09■■■■□ 3.37
SPTBN4-209ENST00000596411 ZEB1P37275 1124 aaPredicted RBP36.07■■■■□ 3.37
SPTBN4-209ENST00000596411 CSRNP3Q8WYN3 585 aa36.05■■■■□ 3.36
SPTBN4-209ENST00000596411 NCAPD3P42695 1498 aa36.03■■■■□ 3.36
SPTBN4-209ENST00000596411 CEP162Q5TB80 1403 aa36.02■■■■□ 3.36
SPTBN4-209ENST00000596411 GOLGA3Q08378 1498 aa36■■■■□ 3.35
SPTBN4-209ENST00000596411 RUSC2Q8N2Y8 1516 aa36■■■■□ 3.35
SPTBN4-209ENST00000596411 PPARGC1BQ86YN6 1023 aaKnown RBP35.99■■■■□ 3.35
SPTBN4-209ENST00000596411 KIF21BO75037 1637 aa35.96■■■■□ 3.35
SPTBN4-209ENST00000596411 TOP2BQ02880 1626 aa35.88■■■■□ 3.33
SPTBN4-209ENST00000596411 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
SPTBN4-209ENST00000596411 BIVM-ERCC5R4GMW8 1640 aa35.84■■■■□ 3.33
SPTBN4-209ENST00000596411 UBTFP17480 764 aaKnown RBP35.63■■■■□ 3.29
SPTBN4-209ENST00000596411 CFTRP13569 1480 aa35.6■■■■□ 3.29
SPTBN4-209ENST00000596411 PRDM2Q13029 1718 aa35.54■■■■□ 3.28
SPTBN4-209ENST00000596411 ERICH3Q5RHP9 1530 aa35.48■■■■□ 3.27
SPTBN4-209ENST00000596411 CUX1P39880 1505 aa35.45■■■■□ 3.27
SPTBN4-209ENST00000596411 RAPGEF2Q9Y4G8 1499 aa35.44■■■■□ 3.26
SPTBN4-209ENST00000596411 CLIP1P30622 1438 aa35.43■■■■□ 3.26
SPTBN4-209ENST00000596411 PRXQ9BXM0 1461 aa35.38■■■■□ 3.25
SPTBN4-209ENST00000596411 VPS8Q8N3P4 1428 aa35.36■■■■□ 3.25
SPTBN4-209ENST00000596411 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
SPTBN4-209ENST00000596411 CADPSQ9ULU8 1353 aa35.17■■■■□ 3.22
SPTBN4-209ENST00000596411 CC2D2AQ9P2K1 1620 aa35.12■■■■□ 3.21
SPTBN4-209ENST00000596411 CCER1Q8TC90 406 aaPredicted RBP35.09■■■■□ 3.21
SPTBN4-209ENST00000596411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.08■■■■□ 3.21
SPTBN4-209ENST00000596411 ARAP1Q96P48 1450 aa34.98■■■■□ 3.19
SPTBN4-209ENST00000596411 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
SPTBN4-209ENST00000596411 APLP2Q06481 763 aa34.88■■■■□ 3.17
SPTBN4-209ENST00000596411 FGD5Q6ZNL6 1462 aa34.84■■■■□ 3.17
SPTBN4-209ENST00000596411 CUX2O14529 1486 aa34.83■■■■□ 3.17
SPTBN4-209ENST00000596411 IGF1RP08069 1367 aa34.79■■■■□ 3.16
SPTBN4-209ENST00000596411 FANCD2Q9BXW9 1451 aa34.78■■■■□ 3.16
SPTBN4-209ENST00000596411 DNMBPQ6XZF7 1577 aa34.75■■■■□ 3.15
SPTBN4-209ENST00000596411 ARHGAP35Q9NRY4 1499 aa34.73■■■■□ 3.15
SPTBN4-209ENST00000596411 CARMIL1Q5VZK9 1371 aa34.62■■■■□ 3.13
SPTBN4-209ENST00000596411 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
SPTBN4-209ENST00000596411 LAMC3Q9Y6N6 1575 aa34.6■■■■□ 3.13
SPTBN4-209ENST00000596411 MAP3K1Q13233 1512 aa34.59■■■■□ 3.13
SPTBN4-209ENST00000596411 TOPBP1Q92547 1522 aa34.57■■■■□ 3.12
SPTBN4-209ENST00000596411 RANGAP1P46060 587 aaPredicted RBP34.56■■■■□ 3.12
SPTBN4-209ENST00000596411 RRBP1Q9P2E9 1410 aaKnown RBP34.55■■■■□ 3.12
SPTBN4-209ENST00000596411 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
SPTBN4-209ENST00000596411 HNRNPUL2Q1KMD3 747 aaKnown RBP34.5■■■■□ 3.11
SPTBN4-209ENST00000596411 CUL7Q14999 1698 aa34.47■■■■□ 3.11
SPTBN4-209ENST00000596411 WDR97A6NE52 1622 aa34.42■■■■□ 3.1
SPTBN4-209ENST00000596411 KANK4Q5T7N3 995 aaPredicted RBP34.41■■■■□ 3.1
SPTBN4-209ENST00000596411 NESP48681 1621 aa34.41■■■■□ 3.1
SPTBN4-209ENST00000596411 CLSPNQ9HAW4 1339 aa34.4■■■■□ 3.1
SPTBN4-209ENST00000596411 TIAM1Q13009 1591 aa34.39■■■■□ 3.1
SPTBN4-209ENST00000596411 RAD54L2Q9Y4B4 1467 aa34.35■■■■□ 3.09
SPTBN4-209ENST00000596411 FHAD1B1AJZ9 1412 aa34.33■■■■□ 3.09
SPTBN4-209ENST00000596411 EFCAB5A4FU69 1503 aa34.33■■■■□ 3.09
SPTBN4-209ENST00000596411 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
SPTBN4-209ENST00000596411 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
SPTBN4-209ENST00000596411 DIEXFQ68CQ4 756 aaKnown RBP34.27■■■■□ 3.08
SPTBN4-209ENST00000596411 CCNB3Q8WWL7 1395 aa34.26■■■■□ 3.08
SPTBN4-209ENST00000596411 CTTNBP2Q8WZ74 1663 aa34.26■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms