RNA–Protein interactions for RNA: ENST00000595711.5

LINC00347-203, long intergenic non-protein coding RNA 347, humanhuman

TSL 5

Gene LINC00347, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-203ENST00000595711 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
LINC00347-203ENST00000595711 POTEDQ86YR6 584 aa21.18■□□□□ 0.98
LINC00347-203ENST00000595711 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
LINC00347-203ENST00000595711 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
LINC00347-203ENST00000595711 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
LINC00347-203ENST00000595711 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
LINC00347-203ENST00000595711 FOXD1Q16676 465 aa18.48■□□□□ 0.55
LINC00347-203ENST00000595711 MSH5O43196 834 aa18.23■□□□□ 0.51
LINC00347-203ENST00000595711 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
LINC00347-203ENST00000595711 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
LINC00347-203ENST00000595711 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
LINC00347-203ENST00000595711 ABCC9O60706 1549 aa16.79■□□□□ 0.28
LINC00347-203ENST00000595711 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
LINC00347-203ENST00000595711 POTEHQ6S545 545 aa16.23■□□□□ 0.19
LINC00347-203ENST00000595711 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
LINC00347-203ENST00000595711 NACADO15069 1562 aa16.17■□□□□ 0.18
LINC00347-203ENST00000595711 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
LINC00347-203ENST00000595711 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
LINC00347-203ENST00000595711 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
LINC00347-203ENST00000595711 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
LINC00347-203ENST00000595711 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC00347-203ENST00000595711 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
LINC00347-203ENST00000595711 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
LINC00347-203ENST00000595711 ADRA2BP18089 450 aa15.66■□□□□ 0.1
LINC00347-203ENST00000595711 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
LINC00347-203ENST00000595711 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
LINC00347-203ENST00000595711 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
LINC00347-203ENST00000595711 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
LINC00347-203ENST00000595711 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
LINC00347-203ENST00000595711 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
LINC00347-203ENST00000595711 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
LINC00347-203ENST00000595711 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
LINC00347-203ENST00000595711 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
LINC00347-203ENST00000595711 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
LINC00347-203ENST00000595711 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
LINC00347-203ENST00000595711 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
LINC00347-203ENST00000595711 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
LINC00347-203ENST00000595711 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
LINC00347-203ENST00000595711 ATAD2BQ9ULI0 1458 aa14.92□□□□□ -0.02
LINC00347-203ENST00000595711 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
LINC00347-203ENST00000595711 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
LINC00347-203ENST00000595711 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
LINC00347-203ENST00000595711 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
LINC00347-203ENST00000595711 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
LINC00347-203ENST00000595711 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
LINC00347-203ENST00000595711 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
LINC00347-203ENST00000595711 WIZO95785 1651 aa14.68□□□□□ -0.06
LINC00347-203ENST00000595711 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
LINC00347-203ENST00000595711 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
LINC00347-203ENST00000595711 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
LINC00347-203ENST00000595711 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
LINC00347-203ENST00000595711 NESP48681 1621 aa14.49□□□□□ -0.09
LINC00347-203ENST00000595711 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
LINC00347-203ENST00000595711 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
LINC00347-203ENST00000595711 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LINC00347-203ENST00000595711 CFTRP13569 1480 aa14.4□□□□□ -0.1
LINC00347-203ENST00000595711 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
LINC00347-203ENST00000595711 CUX2O14529 1486 aa14.35□□□□□ -0.11
LINC00347-203ENST00000595711 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
LINC00347-203ENST00000595711 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
LINC00347-203ENST00000595711 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
LINC00347-203ENST00000595711 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
LINC00347-203ENST00000595711 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
LINC00347-203ENST00000595711 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
LINC00347-203ENST00000595711 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
LINC00347-203ENST00000595711 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
LINC00347-203ENST00000595711 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
LINC00347-203ENST00000595711 WDR62O43379 1518 aa14.19□□□□□ -0.14
LINC00347-203ENST00000595711 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
LINC00347-203ENST00000595711 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
LINC00347-203ENST00000595711 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
LINC00347-203ENST00000595711 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
LINC00347-203ENST00000595711 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
LINC00347-203ENST00000595711 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
LINC00347-203ENST00000595711 SOGA1O94964 1423 aa13.95□□□□□ -0.18
LINC00347-203ENST00000595711 CUX1P39880 1505 aa13.95□□□□□ -0.18
LINC00347-203ENST00000595711 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
LINC00347-203ENST00000595711 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
LINC00347-203ENST00000595711 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
LINC00347-203ENST00000595711 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
LINC00347-203ENST00000595711 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
LINC00347-203ENST00000595711 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
LINC00347-203ENST00000595711 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
LINC00347-203ENST00000595711 TOP2BQ02880 1626 aa13.85□□□□□ -0.19
LINC00347-203ENST00000595711 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00347-203ENST00000595711 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
LINC00347-203ENST00000595711 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
LINC00347-203ENST00000595711 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
LINC00347-203ENST00000595711 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
LINC00347-203ENST00000595711 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
LINC00347-203ENST00000595711 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
LINC00347-203ENST00000595711 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
LINC00347-203ENST00000595711 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
LINC00347-203ENST00000595711 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
LINC00347-203ENST00000595711 GAPVD1Q14C86 1478 aa13.78□□□□□ -0.2
LINC00347-203ENST00000595711 FBLN2P98095 1184 aa13.77□□□□□ -0.21
LINC00347-203ENST00000595711 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
LINC00347-203ENST00000595711 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
LINC00347-203ENST00000595711 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
LINC00347-203ENST00000595711 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 382.1 ms