RNA–Protein interactions for RNA: ENST00000590662.1

ALPK2-206, Transcript of alpha kinase 2, humanhuman

Gene ALPK2, Length 2,226 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK2-206ENST00000590662 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
ALPK2-206ENST00000590662 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
ALPK2-206ENST00000590662 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
ALPK2-206ENST00000590662 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
ALPK2-206ENST00000590662 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
ALPK2-206ENST00000590662 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
ALPK2-206ENST00000590662 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
ALPK2-206ENST00000590662 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
ALPK2-206ENST00000590662 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
ALPK2-206ENST00000590662 ABCC9O60706 1549 aa23.07■■□□□ 1.28
ALPK2-206ENST00000590662 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
ALPK2-206ENST00000590662 NACADO15069 1562 aa22.92■■□□□ 1.26
ALPK2-206ENST00000590662 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
ALPK2-206ENST00000590662 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.21
ALPK2-206ENST00000590662 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
ALPK2-206ENST00000590662 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
ALPK2-206ENST00000590662 WIZO95785 1651 aa22.27■■□□□ 1.16
ALPK2-206ENST00000590662 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
ALPK2-206ENST00000590662 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
ALPK2-206ENST00000590662 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
ALPK2-206ENST00000590662 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
ALPK2-206ENST00000590662 HRCP23327 699 aa22.16■■□□□ 1.14
ALPK2-206ENST00000590662 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
ALPK2-206ENST00000590662 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
ALPK2-206ENST00000590662 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
ALPK2-206ENST00000590662 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
ALPK2-206ENST00000590662 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
ALPK2-206ENST00000590662 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
ALPK2-206ENST00000590662 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
ALPK2-206ENST00000590662 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
ALPK2-206ENST00000590662 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
ALPK2-206ENST00000590662 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
ALPK2-206ENST00000590662 ABCC8Q09428 1581 aa21.64■■□□□ 1.06
ALPK2-206ENST00000590662 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
ALPK2-206ENST00000590662 EEA1Q15075 1411 aa21.52■■□□□ 1.04
ALPK2-206ENST00000590662 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
ALPK2-206ENST00000590662 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
ALPK2-206ENST00000590662 ZEB1P37275 1124 aaPredicted RBP21.48■■□□□ 1.03
ALPK2-206ENST00000590662 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
ALPK2-206ENST00000590662 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
ALPK2-206ENST00000590662 SOGA1O94964 1423 aa21.39■■□□□ 1.01
ALPK2-206ENST00000590662 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
ALPK2-206ENST00000590662 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
ALPK2-206ENST00000590662 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
ALPK2-206ENST00000590662 CEP162Q5TB80 1403 aa21.31■■□□□ 1
ALPK2-206ENST00000590662 SYNJ1O43426 1573 aa21.28■■□□□ 1
ALPK2-206ENST00000590662 GOLGA3Q08378 1498 aa21.27■■□□□ 1
ALPK2-206ENST00000590662 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
ALPK2-206ENST00000590662 KIF21BO75037 1637 aa21.22■□□□□ 0.99
ALPK2-206ENST00000590662 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
ALPK2-206ENST00000590662 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
ALPK2-206ENST00000590662 TOP2BQ02880 1626 aa21.14■□□□□ 0.97
ALPK2-206ENST00000590662 NCAPD3P42695 1498 aa21.14■□□□□ 0.97
ALPK2-206ENST00000590662 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
ALPK2-206ENST00000590662 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
ALPK2-206ENST00000590662 CLIP1P30622 1438 aa20.95■□□□□ 0.94
ALPK2-206ENST00000590662 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
ALPK2-206ENST00000590662 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
ALPK2-206ENST00000590662 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
ALPK2-206ENST00000590662 CCER1Q8TC90 406 aaPredicted RBP20.91■□□□□ 0.94
ALPK2-206ENST00000590662 CFTRP13569 1480 aa20.91■□□□□ 0.94
ALPK2-206ENST00000590662 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.94
ALPK2-206ENST00000590662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.94
ALPK2-206ENST00000590662 CUX1P39880 1505 aa20.86■□□□□ 0.93
ALPK2-206ENST00000590662 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
ALPK2-206ENST00000590662 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
ALPK2-206ENST00000590662 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
ALPK2-206ENST00000590662 APLP2Q06481 763 aa20.72■□□□□ 0.91
ALPK2-206ENST00000590662 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ALPK2-206ENST00000590662 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
ALPK2-206ENST00000590662 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
ALPK2-206ENST00000590662 RANGAP1P46060 587 aaPredicted RBP20.54■□□□□ 0.88
ALPK2-206ENST00000590662 CUX2O14529 1486 aa20.53■□□□□ 0.88
ALPK2-206ENST00000590662 FGD5Q6ZNL6 1462 aa20.51■□□□□ 0.87
ALPK2-206ENST00000590662 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
ALPK2-206ENST00000590662 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
ALPK2-206ENST00000590662 IGF1RP08069 1367 aa20.48■□□□□ 0.87
ALPK2-206ENST00000590662 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
ALPK2-206ENST00000590662 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
ALPK2-206ENST00000590662 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
ALPK2-206ENST00000590662 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
ALPK2-206ENST00000590662 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
ALPK2-206ENST00000590662 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
ALPK2-206ENST00000590662 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
ALPK2-206ENST00000590662 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
ALPK2-206ENST00000590662 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
ALPK2-206ENST00000590662 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
ALPK2-206ENST00000590662 TOPBP1Q92547 1522 aa20.33■□□□□ 0.84
ALPK2-206ENST00000590662 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
ALPK2-206ENST00000590662 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
ALPK2-206ENST00000590662 CUL7Q14999 1698 aa20.3■□□□□ 0.84
ALPK2-206ENST00000590662 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
ALPK2-206ENST00000590662 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
ALPK2-206ENST00000590662 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
ALPK2-206ENST00000590662 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
ALPK2-206ENST00000590662 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
ALPK2-206ENST00000590662 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
ALPK2-206ENST00000590662 NESP48681 1621 aa20.23■□□□□ 0.83
ALPK2-206ENST00000590662 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
ALPK2-206ENST00000590662 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms