RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-210ENST00000588892 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
U2AF1L4-210ENST00000588892 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
U2AF1L4-210ENST00000588892 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
U2AF1L4-210ENST00000588892 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
U2AF1L4-210ENST00000588892 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
U2AF1L4-210ENST00000588892 ABCC9O60706 1549 aa20.35■□□□□ 0.85
U2AF1L4-210ENST00000588892 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.82
U2AF1L4-210ENST00000588892 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
U2AF1L4-210ENST00000588892 NACADO15069 1562 aa19.81■□□□□ 0.76
U2AF1L4-210ENST00000588892 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
U2AF1L4-210ENST00000588892 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
U2AF1L4-210ENST00000588892 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
U2AF1L4-210ENST00000588892 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
U2AF1L4-210ENST00000588892 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
U2AF1L4-210ENST00000588892 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
U2AF1L4-210ENST00000588892 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
U2AF1L4-210ENST00000588892 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
U2AF1L4-210ENST00000588892 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
U2AF1L4-210ENST00000588892 WIZO95785 1651 aa18.95■□□□□ 0.62
U2AF1L4-210ENST00000588892 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
U2AF1L4-210ENST00000588892 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
U2AF1L4-210ENST00000588892 HRCP23327 699 aa18.66■□□□□ 0.58
U2AF1L4-210ENST00000588892 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
U2AF1L4-210ENST00000588892 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
U2AF1L4-210ENST00000588892 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
U2AF1L4-210ENST00000588892 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
U2AF1L4-210ENST00000588892 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
U2AF1L4-210ENST00000588892 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
U2AF1L4-210ENST00000588892 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
U2AF1L4-210ENST00000588892 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
U2AF1L4-210ENST00000588892 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
U2AF1L4-210ENST00000588892 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
U2AF1L4-210ENST00000588892 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
U2AF1L4-210ENST00000588892 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
U2AF1L4-210ENST00000588892 HMGXB3Q12766 1538 aa18.27■□□□□ 0.52
U2AF1L4-210ENST00000588892 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
U2AF1L4-210ENST00000588892 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
U2AF1L4-210ENST00000588892 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
U2AF1L4-210ENST00000588892 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
U2AF1L4-210ENST00000588892 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
U2AF1L4-210ENST00000588892 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
U2AF1L4-210ENST00000588892 CFTRP13569 1480 aa17.97■□□□□ 0.47
U2AF1L4-210ENST00000588892 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
U2AF1L4-210ENST00000588892 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
U2AF1L4-210ENST00000588892 NESP48681 1621 aa17.92■□□□□ 0.46
U2AF1L4-210ENST00000588892 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
U2AF1L4-210ENST00000588892 SOGA1O94964 1423 aa17.89■□□□□ 0.45
U2AF1L4-210ENST00000588892 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
U2AF1L4-210ENST00000588892 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
U2AF1L4-210ENST00000588892 CUX1P39880 1505 aa17.81■□□□□ 0.44
U2AF1L4-210ENST00000588892 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
U2AF1L4-210ENST00000588892 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
U2AF1L4-210ENST00000588892 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
U2AF1L4-210ENST00000588892 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
U2AF1L4-210ENST00000588892 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
U2AF1L4-210ENST00000588892 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
U2AF1L4-210ENST00000588892 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
U2AF1L4-210ENST00000588892 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
U2AF1L4-210ENST00000588892 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
U2AF1L4-210ENST00000588892 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
U2AF1L4-210ENST00000588892 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
U2AF1L4-210ENST00000588892 EEA1Q15075 1411 aa17.57■□□□□ 0.4
U2AF1L4-210ENST00000588892 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
U2AF1L4-210ENST00000588892 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
U2AF1L4-210ENST00000588892 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
U2AF1L4-210ENST00000588892 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
U2AF1L4-210ENST00000588892 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
U2AF1L4-210ENST00000588892 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
U2AF1L4-210ENST00000588892 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
U2AF1L4-210ENST00000588892 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
U2AF1L4-210ENST00000588892 CUX2O14529 1486 aa17.49■□□□□ 0.39
U2AF1L4-210ENST00000588892 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
U2AF1L4-210ENST00000588892 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
U2AF1L4-210ENST00000588892 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
U2AF1L4-210ENST00000588892 KIF21BO75037 1637 aa17.43■□□□□ 0.38
U2AF1L4-210ENST00000588892 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
U2AF1L4-210ENST00000588892 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
U2AF1L4-210ENST00000588892 CEP162Q5TB80 1403 aa17.39■□□□□ 0.37
U2AF1L4-210ENST00000588892 IGF1RP08069 1367 aa17.39■□□□□ 0.37
U2AF1L4-210ENST00000588892 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
U2AF1L4-210ENST00000588892 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
U2AF1L4-210ENST00000588892 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
U2AF1L4-210ENST00000588892 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
U2AF1L4-210ENST00000588892 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
U2AF1L4-210ENST00000588892 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
U2AF1L4-210ENST00000588892 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
U2AF1L4-210ENST00000588892 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
U2AF1L4-210ENST00000588892 ERICH3Q5RHP9 1530 aa17.28■□□□□ 0.36
U2AF1L4-210ENST00000588892 WDR62O43379 1518 aa17.26■□□□□ 0.35
U2AF1L4-210ENST00000588892 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
U2AF1L4-210ENST00000588892 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
U2AF1L4-210ENST00000588892 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
U2AF1L4-210ENST00000588892 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
U2AF1L4-210ENST00000588892 CLIP1P30622 1438 aa17.22■□□□□ 0.35
U2AF1L4-210ENST00000588892 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
U2AF1L4-210ENST00000588892 GAPVD1Q14C86 1478 aa17.22■□□□□ 0.35
U2AF1L4-210ENST00000588892 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
U2AF1L4-210ENST00000588892 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
U2AF1L4-210ENST00000588892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
U2AF1L4-210ENST00000588892 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms