RNA–Protein interactions for RNA: ENST00000587998.5

LINC00906-202, long intergenic non-protein coding RNA 906, humanhuman

TSL 3 BASIC

Gene LINC00906, Length 648 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-202ENST00000587998 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
LINC00906-202ENST00000587998 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
LINC00906-202ENST00000587998 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
LINC00906-202ENST00000587998 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
LINC00906-202ENST00000587998 FOXD1Q16676 465 aa19.01■□□□□ 0.63
LINC00906-202ENST00000587998 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.58
LINC00906-202ENST00000587998 ABCC9O60706 1549 aa18.03■□□□□ 0.48
LINC00906-202ENST00000587998 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
LINC00906-202ENST00000587998 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
LINC00906-202ENST00000587998 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
LINC00906-202ENST00000587998 MSH5O43196 834 aa17.7■□□□□ 0.42
LINC00906-202ENST00000587998 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
LINC00906-202ENST00000587998 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
LINC00906-202ENST00000587998 ADRA2BP18089 450 aa17.62■□□□□ 0.41
LINC00906-202ENST00000587998 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
LINC00906-202ENST00000587998 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
LINC00906-202ENST00000587998 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
LINC00906-202ENST00000587998 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC00906-202ENST00000587998 NACADO15069 1562 aa16.42■□□□□ 0.22
LINC00906-202ENST00000587998 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
LINC00906-202ENST00000587998 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
LINC00906-202ENST00000587998 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
LINC00906-202ENST00000587998 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
LINC00906-202ENST00000587998 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
LINC00906-202ENST00000587998 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
LINC00906-202ENST00000587998 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
LINC00906-202ENST00000587998 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
LINC00906-202ENST00000587998 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
LINC00906-202ENST00000587998 CUX2O14529 1486 aa15.96■□□□□ 0.14
LINC00906-202ENST00000587998 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
LINC00906-202ENST00000587998 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LINC00906-202ENST00000587998 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
LINC00906-202ENST00000587998 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
LINC00906-202ENST00000587998 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
LINC00906-202ENST00000587998 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
LINC00906-202ENST00000587998 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
LINC00906-202ENST00000587998 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
LINC00906-202ENST00000587998 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
LINC00906-202ENST00000587998 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
LINC00906-202ENST00000587998 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
LINC00906-202ENST00000587998 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
LINC00906-202ENST00000587998 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
LINC00906-202ENST00000587998 THOC2Q8NI27 1593 aaKnown RBP15.23■□□□□ 0.03
LINC00906-202ENST00000587998 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
LINC00906-202ENST00000587998 NESP48681 1621 aa15.22■□□□□ 0.03
LINC00906-202ENST00000587998 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
LINC00906-202ENST00000587998 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
LINC00906-202ENST00000587998 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
LINC00906-202ENST00000587998 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
LINC00906-202ENST00000587998 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
LINC00906-202ENST00000587998 HMGXB3Q12766 1538 aa14.96□□□□□ -0.02
LINC00906-202ENST00000587998 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
LINC00906-202ENST00000587998 PDS5BQ9NTI5 1447 aa14.94□□□□□ -0.02
LINC00906-202ENST00000587998 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
LINC00906-202ENST00000587998 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
LINC00906-202ENST00000587998 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
LINC00906-202ENST00000587998 KIF21AQ7Z4S6 1674 aa14.9□□□□□ -0.02
LINC00906-202ENST00000587998 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
LINC00906-202ENST00000587998 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
LINC00906-202ENST00000587998 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
LINC00906-202ENST00000587998 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
LINC00906-202ENST00000587998 WDR62O43379 1518 aa14.83□□□□□ -0.04
LINC00906-202ENST00000587998 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
LINC00906-202ENST00000587998 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
LINC00906-202ENST00000587998 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
LINC00906-202ENST00000587998 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
LINC00906-202ENST00000587998 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
LINC00906-202ENST00000587998 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
LINC00906-202ENST00000587998 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
LINC00906-202ENST00000587998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00906-202ENST00000587998 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
LINC00906-202ENST00000587998 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
LINC00906-202ENST00000587998 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
LINC00906-202ENST00000587998 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
LINC00906-202ENST00000587998 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
LINC00906-202ENST00000587998 URB2Q14146 1524 aaKnown RBP14.44□□□□□ -0.1
LINC00906-202ENST00000587998 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
LINC00906-202ENST00000587998 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
LINC00906-202ENST00000587998 KCNA4P22459 653 aa14.39□□□□□ -0.11
LINC00906-202ENST00000587998 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
LINC00906-202ENST00000587998 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
LINC00906-202ENST00000587998 CFTRP13569 1480 aa14.33□□□□□ -0.12
LINC00906-202ENST00000587998 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
LINC00906-202ENST00000587998 CHD1O14646 1710 aa14.27□□□□□ -0.13
LINC00906-202ENST00000587998 FBLN2P98095 1184 aa14.25□□□□□ -0.13
LINC00906-202ENST00000587998 KDM4FA0A1W2PPD8 638 aa14.24□□□□□ -0.13
LINC00906-202ENST00000587998 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
LINC00906-202ENST00000587998 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
LINC00906-202ENST00000587998 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00906-202ENST00000587998 CAPN15O75808 1086 aa14.17□□□□□ -0.14
LINC00906-202ENST00000587998 DSG3P32926 999 aa14.17□□□□□ -0.14
LINC00906-202ENST00000587998 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
LINC00906-202ENST00000587998 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
LINC00906-202ENST00000587998 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
LINC00906-202ENST00000587998 WIZO95785 1651 aa14.07□□□□□ -0.16
LINC00906-202ENST00000587998 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
LINC00906-202ENST00000587998 FBXO41Q8TF61 875 aa14.04□□□□□ -0.16
LINC00906-202ENST00000587998 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
LINC00906-202ENST00000587998 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
LINC00906-202ENST00000587998 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms