RNA–Protein interactions for RNA: ENST00000587261.5

PIK3C3-205, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 5

Gene PIK3C3, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-205ENST00000587261 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
PIK3C3-205ENST00000587261 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
PIK3C3-205ENST00000587261 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
PIK3C3-205ENST00000587261 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
PIK3C3-205ENST00000587261 FOXD1Q16676 465 aa16.07■□□□□ 0.16
PIK3C3-205ENST00000587261 NISCHQ9Y2I1 1504 aa16.05■□□□□ 0.16
PIK3C3-205ENST00000587261 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
PIK3C3-205ENST00000587261 MSH5O43196 834 aa15.29■□□□□ 0.04
PIK3C3-205ENST00000587261 ABCC9O60706 1549 aa15.22■□□□□ 0.03
PIK3C3-205ENST00000587261 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
PIK3C3-205ENST00000587261 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
PIK3C3-205ENST00000587261 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
PIK3C3-205ENST00000587261 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
PIK3C3-205ENST00000587261 ADRA2BP18089 450 aa14.71□□□□□ -0.05
PIK3C3-205ENST00000587261 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
PIK3C3-205ENST00000587261 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
PIK3C3-205ENST00000587261 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
PIK3C3-205ENST00000587261 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
PIK3C3-205ENST00000587261 NACADO15069 1562 aa14.01□□□□□ -0.17
PIK3C3-205ENST00000587261 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
PIK3C3-205ENST00000587261 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
PIK3C3-205ENST00000587261 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PIK3C3-205ENST00000587261 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
PIK3C3-205ENST00000587261 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
PIK3C3-205ENST00000587261 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
PIK3C3-205ENST00000587261 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
PIK3C3-205ENST00000587261 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
PIK3C3-205ENST00000587261 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
PIK3C3-205ENST00000587261 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
PIK3C3-205ENST00000587261 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
PIK3C3-205ENST00000587261 CUX2O14529 1486 aa13.42□□□□□ -0.26
PIK3C3-205ENST00000587261 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
PIK3C3-205ENST00000587261 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
PIK3C3-205ENST00000587261 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
PIK3C3-205ENST00000587261 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
PIK3C3-205ENST00000587261 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
PIK3C3-205ENST00000587261 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
PIK3C3-205ENST00000587261 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
PIK3C3-205ENST00000587261 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
PIK3C3-205ENST00000587261 NCAPD3P42695 1498 aa13□□□□□ -0.33
PIK3C3-205ENST00000587261 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
PIK3C3-205ENST00000587261 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
PIK3C3-205ENST00000587261 NESP48681 1621 aa12.9□□□□□ -0.34
PIK3C3-205ENST00000587261 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
PIK3C3-205ENST00000587261 THOC2Q8NI27 1593 aaKnown RBP12.88□□□□□ -0.35
PIK3C3-205ENST00000587261 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
PIK3C3-205ENST00000587261 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
PIK3C3-205ENST00000587261 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
PIK3C3-205ENST00000587261 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
PIK3C3-205ENST00000587261 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
PIK3C3-205ENST00000587261 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
PIK3C3-205ENST00000587261 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
PIK3C3-205ENST00000587261 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
PIK3C3-205ENST00000587261 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
PIK3C3-205ENST00000587261 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
PIK3C3-205ENST00000587261 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
PIK3C3-205ENST00000587261 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
PIK3C3-205ENST00000587261 WDR62O43379 1518 aa12.61□□□□□ -0.39
PIK3C3-205ENST00000587261 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
PIK3C3-205ENST00000587261 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
PIK3C3-205ENST00000587261 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
PIK3C3-205ENST00000587261 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
PIK3C3-205ENST00000587261 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
PIK3C3-205ENST00000587261 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
PIK3C3-205ENST00000587261 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
PIK3C3-205ENST00000587261 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
PIK3C3-205ENST00000587261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.41
PIK3C3-205ENST00000587261 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
PIK3C3-205ENST00000587261 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
PIK3C3-205ENST00000587261 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
PIK3C3-205ENST00000587261 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
PIK3C3-205ENST00000587261 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
PIK3C3-205ENST00000587261 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
PIK3C3-205ENST00000587261 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
PIK3C3-205ENST00000587261 CFTRP13569 1480 aa12.28□□□□□ -0.44
PIK3C3-205ENST00000587261 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
PIK3C3-205ENST00000587261 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
PIK3C3-205ENST00000587261 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
PIK3C3-205ENST00000587261 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
PIK3C3-205ENST00000587261 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
PIK3C3-205ENST00000587261 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
PIK3C3-205ENST00000587261 WIZO95785 1651 aa12.09□□□□□ -0.47
PIK3C3-205ENST00000587261 CAPN15O75808 1086 aa12.07□□□□□ -0.48
PIK3C3-205ENST00000587261 FBLN2P98095 1184 aa12.07□□□□□ -0.48
PIK3C3-205ENST00000587261 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
PIK3C3-205ENST00000587261 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
PIK3C3-205ENST00000587261 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
PIK3C3-205ENST00000587261 CHD1O14646 1710 aa12.05□□□□□ -0.48
PIK3C3-205ENST00000587261 POTEHQ6S545 545 aa12.03□□□□□ -0.48
PIK3C3-205ENST00000587261 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
PIK3C3-205ENST00000587261 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
PIK3C3-205ENST00000587261 DSG3P32926 999 aa12.01□□□□□ -0.49
PIK3C3-205ENST00000587261 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
PIK3C3-205ENST00000587261 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
PIK3C3-205ENST00000587261 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.5
PIK3C3-205ENST00000587261 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
PIK3C3-205ENST00000587261 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
PIK3C3-205ENST00000587261 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
PIK3C3-205ENST00000587261 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
PIK3C3-205ENST00000587261 POLA1P09884 1462 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms